RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 PLEKHG1Q9ULL1 1385 aa31.72■■■□□ 2.67
SREBF1-210ENST00000471445 DISP3Q9P2K9 1392 aa31.7■■■□□ 2.67
SREBF1-210ENST00000471445 TOM1O60784 492 aa31.7■■■□□ 2.67
SREBF1-210ENST00000471445 TRPM2O94759 1503 aa31.69■■■□□ 2.66
SREBF1-210ENST00000471445 CLTCL1P53675 1640 aa31.67■■■□□ 2.66
SREBF1-210ENST00000471445 CHD2O14647 1828 aaKnown RBP31.65■■■□□ 2.66
SREBF1-210ENST00000471445 NKTRP30414 1462 aaKnown RBP31.65■■■□□ 2.66
SREBF1-210ENST00000471445 CHGAP10645 457 aaKnown RBP31.65■■■□□ 2.66
SREBF1-210ENST00000471445 SLC26A8Q96RN1 970 aa31.65■■■□□ 2.66
SREBF1-210ENST00000471445 DIP2AQ14689 1571 aa31.64■■■□□ 2.65
SREBF1-210ENST00000471445 HDGFP51858 240 aaKnown RBP31.63■■■□□ 2.65
SREBF1-210ENST00000471445 PPP1R15AO75807 674 aaPredicted RBP31.61■■■□□ 2.65
SREBF1-210ENST00000471445 KCNA6P17658 529 aa31.61■■■□□ 2.65
SREBF1-210ENST00000471445 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.61■■■□□ 2.65
SREBF1-210ENST00000471445 KIF1BO60333 1816 aa31.6■■■□□ 2.65
SREBF1-210ENST00000471445 PIP4K2BP78356 416 aa31.59■■■□□ 2.65
SREBF1-210ENST00000471445 ADAMTS13Q76LX8 1427 aa31.58■■■□□ 2.65
SREBF1-210ENST00000471445 SCAF1Q9H7N4 1312 aaKnown RBP31.58■■■□□ 2.65
SREBF1-210ENST00000471445 SOCS7O14512 581 aa31.57■■■□□ 2.64
SREBF1-210ENST00000471445 ILDR2Q71H61 639 aa31.57■■■□□ 2.64
SREBF1-210ENST00000471445 BCANQ96GW7 911 aa31.56■■■□□ 2.64
SREBF1-210ENST00000471445 NRXN3Q9Y4C0 1643 aa31.56■■■□□ 2.64
SREBF1-210ENST00000471445 TMEM94Q12767 1356 aa31.56■■■□□ 2.64
SREBF1-210ENST00000471445 TRIM52Q96A61 297 aa31.53■■■□□ 2.64
SREBF1-210ENST00000471445 SETBP1Q9Y6X0 1596 aa31.52■■■□□ 2.64
SREBF1-210ENST00000471445 NEXMIFQ5QGS0 1516 aa31.52■■■□□ 2.64
SREBF1-210ENST00000471445 HSPA1LP34931 641 aa31.51■■■□□ 2.63
SREBF1-210ENST00000471445 NUTM2DQ5VT03 806 aaPredicted RBP31.51■■■□□ 2.63
SREBF1-210ENST00000471445 SENP3Q9H4L4 574 aaPredicted RBP31.51■■■□□ 2.63
SREBF1-210ENST00000471445 TBX22Q9Y458 520 aa31.51■■■□□ 2.63
SREBF1-210ENST00000471445 PIK3R4Q99570 1358 aa31.48■■■□□ 2.63
SREBF1-210ENST00000471445 PROSER2Q86WR7 435 aaPredicted RBP31.46■■■□□ 2.63
SREBF1-210ENST00000471445 SLC4A1APQ9BWU0 796 aaKnown RBP31.46■■■□□ 2.63
SREBF1-210ENST00000471445 XRN1Q8IZH2 1706 aaKnown RBP31.43■■■□□ 2.62
SREBF1-210ENST00000471445 ZNF326Q5BKZ1 582 aaKnown RBP31.41■■■□□ 2.62
SREBF1-210ENST00000471445 RBM33Q96EV2 1170 aaKnown RBP31.39■■■□□ 2.62
SREBF1-210ENST00000471445 PTPRUQ92729 1446 aa31.39■■■□□ 2.62
SREBF1-210ENST00000471445 PPLO60437 1756 aa31.38■■■□□ 2.61
SREBF1-210ENST00000471445 NCOA3Q9Y6Q9 1424 aa31.38■■■□□ 2.61
SREBF1-210ENST00000471445 ROBO1Q9Y6N7 1651 aa31.38■■■□□ 2.61
SREBF1-210ENST00000471445 MSH6P52701 1360 aa31.37■■■□□ 2.61
SREBF1-210ENST00000471445 MED1Q15648 1581 aaPredicted RBP31.37■■■□□ 2.61
SREBF1-210ENST00000471445 FAM135BQ49AJ0 1406 aa31.36■■■□□ 2.61
SREBF1-210ENST00000471445 SETD1AO15047 1707 aaKnown RBP31.35■■■□□ 2.61
SREBF1-210ENST00000471445 SETD5Q9C0A6 1442 aa31.33■■■□□ 2.61
SREBF1-210ENST00000471445 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.32■■■□□ 2.6
SREBF1-210ENST00000471445 FOXD1Q16676 465 aa31.29■■■□□ 2.6
SREBF1-210ENST00000471445 MPHOSPH9Q99550 1183 aa31.29■■■□□ 2.6
SREBF1-210ENST00000471445 CCDC144AA2RUR9 1427 aa31.28■■■□□ 2.6
SREBF1-210ENST00000471445 IFT172Q9UG01 1749 aa31.28■■■□□ 2.6
SREBF1-210ENST00000471445 METP08581 1390 aa31.28■■■□□ 2.6
SREBF1-210ENST00000471445 ACIN1Q9UKV3 1341 aaKnown RBP31.27■■■□□ 2.6
SREBF1-210ENST00000471445 AMOTL2Q9Y2J4 779 aa31.27■■■□□ 2.6
SREBF1-210ENST00000471445 RPGRIP1LQ68CZ1 1315 aa31.25■■■□□ 2.59
SREBF1-210ENST00000471445 RAB3GAP2Q9H2M9 1393 aa31.23■■■□□ 2.59
SREBF1-210ENST00000471445 SPATA31E1Q6ZUB1 1445 aa31.23■■■□□ 2.59
SREBF1-210ENST00000471445 VGFO15240 615 aaPredicted RBP31.2■■■□□ 2.59
SREBF1-210ENST00000471445 DCCP43146 1447 aa31.19■■■□□ 2.58
SREBF1-210ENST00000471445 PHLPP1O60346 1717 aa31.18■■■□□ 2.58
SREBF1-210ENST00000471445 NALCNQ8IZF0 1738 aa31.18■■■□□ 2.58
SREBF1-210ENST00000471445 PRAG1Q86YV5 1406 aa31.17■■■□□ 2.58
SREBF1-210ENST00000471445 C14orf37Q86TY3 774 aa31.17■■■□□ 2.58
SREBF1-210ENST00000471445 SLAIN2Q9P270 581 aa31.17■■■□□ 2.58
SREBF1-210ENST00000471445 C19orf44Q9H6X5 657 aa31.16■■■□□ 2.58
SREBF1-210ENST00000471445 PTCH1Q13635 1447 aa31.15■■■□□ 2.58
SREBF1-210ENST00000471445 CADPS2Q86UW7 1296 aa31.13■■■□□ 2.57
SREBF1-210ENST00000471445 COL16A1Q07092 1604 aaPredicted RBP31.13■■■□□ 2.57
SREBF1-210ENST00000471445 ADGRL3Q9HAR2 1447 aa31.12■■■□□ 2.57
SREBF1-210ENST00000471445 AHDC1Q5TGY3 1603 aaPredicted RBP31.11■■■□□ 2.57
SREBF1-210ENST00000471445 ANKRD30BQ9BXX2 1392 aa31.09■■■□□ 2.57
SREBF1-210ENST00000471445 ATF3P18847 181 aa31.08■■■□□ 2.57
SREBF1-210ENST00000471445 MST1RQ04912 1400 aa31.06■■■□□ 2.56
SREBF1-210ENST00000471445 ADGRF5Q8IZF2 1346 aa31.05■■■□□ 2.56
SREBF1-210ENST00000471445 RGL3Q3MIN7 710 aa31.04■■■□□ 2.56
SREBF1-210ENST00000471445 PIK3C2GO75747 1445 aa31.04■■■□□ 2.56
SREBF1-210ENST00000471445 KNDC1Q76NI1 1749 aa31.04■■■□□ 2.56
SREBF1-210ENST00000471445 ROBO2Q9HCK4 1378 aa31.04■■■□□ 2.56
SREBF1-210ENST00000471445 ASXL1Q8IXJ9 1541 aa31.03■■■□□ 2.56
SREBF1-210ENST00000471445 NHSL1Q5SYE7 1610 aa31.02■■■□□ 2.56
SREBF1-210ENST00000471445 MYOM2P54296 1465 aa31.01■■■□□ 2.55
SREBF1-210ENST00000471445 NRXN1Q9ULB1 1477 aa30.99■■■□□ 2.55
SREBF1-210ENST00000471445 HRCP23327 699 aa30.98■■■□□ 2.55
SREBF1-210ENST00000471445 PHF23Q9BUL5 403 aaPredicted RBP30.98■■■□□ 2.55
SREBF1-210ENST00000471445 LAMC1P11047 1609 aa30.98■■■□□ 2.55
SREBF1-210ENST00000471445 SHPRHQ149N8 1683 aa30.97■■■□□ 2.55
SREBF1-210ENST00000471445 JCADQ9P266 1359 aa30.97■■■□□ 2.55
SREBF1-210ENST00000471445 TECPR2O15040 1411 aa30.97■■■□□ 2.55
SREBF1-210ENST00000471445 BRINP3Q76B58 766 aa30.96■■■□□ 2.55
SREBF1-210ENST00000471445 CDC42BPGQ6DT37 1551 aa30.92■■■□□ 2.54
SREBF1-210ENST00000471445 LRPPRCP42704 1394 aaKnown RBP30.91■■■□□ 2.54
SREBF1-210ENST00000471445 C1orf167Q5SNV9 1468 aa30.89■■■□□ 2.53
SREBF1-210ENST00000471445 ABCC11Q96J66 1382 aa30.86■■■□□ 2.53
SREBF1-210ENST00000471445 YTHDC2Q9H6S0 1430 aaKnown RBP30.85■■■□□ 2.53
SREBF1-210ENST00000471445 LRP6O75581 1613 aa30.84■■■□□ 2.53
SREBF1-210ENST00000471445 RGS17Q9UGC6 210 aaPredicted RBP30.83■■■□□ 2.53
SREBF1-210ENST00000471445 SPATA31A6Q5VVP1 1343 aa30.81■■■□□ 2.52
SREBF1-210ENST00000471445 TMEM132EQ6IEE7 984 aa30.81■■■□□ 2.52
SREBF1-210ENST00000471445 C14orf93Q9H972 538 aaKnown RBP30.81■■■□□ 2.52
SREBF1-210ENST00000471445 STK26Q9P289 416 aa30.78■■■□□ 2.52
SREBF1-210ENST00000471445 FMN2Q9NZ56 1722 aa30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms