RNA–Protein interactions for RNA: ENST00000470503.1

GCFC2-207, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 1 (best) BASIC

Gene GCFC2, Length 1,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-207ENST00000470503 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.76■■■□□ 2.35
GCFC2-207ENST00000470503 PLEKHG1Q9ULL1 1385 aa29.76■■■□□ 2.35
GCFC2-207ENST00000470503 SENP3Q9H4L4 574 aaPredicted RBP29.75■■■□□ 2.35
GCFC2-207ENST00000470503 ZFYVE9O95405 1425 aa29.74■■■□□ 2.35
GCFC2-207ENST00000470503 PPP1R15AO75807 674 aaPredicted RBP29.74■■■□□ 2.35
GCFC2-207ENST00000470503 XIRP1Q702N8 1843 aaKnown RBP29.73■■■□□ 2.35
GCFC2-207ENST00000470503 TBX22Q9Y458 520 aa29.72■■■□□ 2.35
GCFC2-207ENST00000470503 RIMS2Q9UQ26 1411 aa29.71■■■□□ 2.35
GCFC2-207ENST00000470503 NWD1Q149M9 1564 aa29.71■■■□□ 2.35
GCFC2-207ENST00000470503 UNC13BO14795 1591 aa29.7■■■□□ 2.35
GCFC2-207ENST00000470503 MSH6P52701 1360 aa29.7■■■□□ 2.35
GCFC2-207ENST00000470503 GCC2Q8IWJ2 1684 aa29.66■■■□□ 2.34
GCFC2-207ENST00000470503 NCOA3Q9Y6Q9 1424 aa29.66■■■□□ 2.34
GCFC2-207ENST00000470503 TMEM131LA2VDJ0 1609 aa29.65■■■□□ 2.34
GCFC2-207ENST00000470503 CHGAP10645 457 aaKnown RBP29.64■■■□□ 2.34
GCFC2-207ENST00000470503 SLAIN2Q9P270 581 aa29.63■■■□□ 2.33
GCFC2-207ENST00000470503 NUP155O75694 1391 aa29.63■■■□□ 2.33
GCFC2-207ENST00000470503 RBM33Q96EV2 1170 aaKnown RBP29.62■■■□□ 2.33
GCFC2-207ENST00000470503 PIK3R4Q99570 1358 aa29.62■■■□□ 2.33
GCFC2-207ENST00000470503 IQGAP3Q86VI3 1631 aa29.59■■■□□ 2.33
GCFC2-207ENST00000470503 RGS17Q9UGC6 210 aaPredicted RBP29.57■■■□□ 2.32
GCFC2-207ENST00000470503 E9PCH4 1651 aa29.56■■■□□ 2.32
GCFC2-207ENST00000470503 ROBO1Q9Y6N7 1651 aa29.56■■■□□ 2.32
GCFC2-207ENST00000470503 CHD2O14647 1828 aaKnown RBP29.55■■■□□ 2.32
GCFC2-207ENST00000470503 ADAMTS13Q76LX8 1427 aa29.54■■■□□ 2.32
GCFC2-207ENST00000470503 DIP2AQ14689 1571 aa29.54■■■□□ 2.32
GCFC2-207ENST00000470503 ITGAEP38570 1179 aa29.53■■■□□ 2.32
GCFC2-207ENST00000470503 CADPS2Q86UW7 1296 aa29.52■■■□□ 2.32
GCFC2-207ENST00000470503 C19orf44Q9H6X5 657 aa29.52■■■□□ 2.32
GCFC2-207ENST00000470503 MYO5BQ9ULV0 1848 aa29.52■■■□□ 2.32
GCFC2-207ENST00000470503 C14orf37Q86TY3 774 aa29.5■■■□□ 2.31
GCFC2-207ENST00000470503 JCADQ9P266 1359 aa29.49■■■□□ 2.31
GCFC2-207ENST00000470503 NUTM2DQ5VT03 806 aaPredicted RBP29.48■■■□□ 2.31
GCFC2-207ENST00000470503 ATF3P18847 181 aa29.46■■■□□ 2.31
GCFC2-207ENST00000470503 AMOTL2Q9Y2J4 779 aa29.44■■■□□ 2.3
GCFC2-207ENST00000470503 TRPM2O94759 1503 aa29.44■■■□□ 2.3
GCFC2-207ENST00000470503 POTEAQ6S8J7 498 aa29.39■■■□□ 2.3
GCFC2-207ENST00000470503 ZNF326Q5BKZ1 582 aaKnown RBP29.38■■■□□ 2.29
GCFC2-207ENST00000470503 SPATA31A6Q5VVP1 1343 aa29.38■■■□□ 2.29
GCFC2-207ENST00000470503 PPARGC1BQ86YN6 1023 aaKnown RBP29.37■■■□□ 2.29
GCFC2-207ENST00000470503 PHLPP1O60346 1717 aa29.37■■■□□ 2.29
GCFC2-207ENST00000470503 DCCP43146 1447 aa29.36■■■□□ 2.29
GCFC2-207ENST00000470503 RRBP1Q9P2E9 1410 aaKnown RBP29.36■■■□□ 2.29
GCFC2-207ENST00000470503 PTPRUQ92729 1446 aa29.35■■■□□ 2.29
GCFC2-207ENST00000470503 SETBP1Q9Y6X0 1596 aa29.34■■■□□ 2.29
GCFC2-207ENST00000470503 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.31■■■□□ 2.28
GCFC2-207ENST00000470503 COL16A1Q07092 1604 aaPredicted RBP29.31■■■□□ 2.28
GCFC2-207ENST00000470503 SPHKAPQ2M3C7 1700 aa29.31■■■□□ 2.28
GCFC2-207ENST00000470503 AHDC1Q5TGY3 1603 aaPredicted RBP29.3■■■□□ 2.28
GCFC2-207ENST00000470503 BRINP3Q76B58 766 aa29.28■■■□□ 2.28
GCFC2-207ENST00000470503 NAIPQ13075 1403 aa29.28■■■□□ 2.28
GCFC2-207ENST00000470503 ZNF772Q68DY9 489 aaPredicted RBP29.25■■■□□ 2.27
GCFC2-207ENST00000470503 METP08581 1390 aa29.25■■■□□ 2.27
GCFC2-207ENST00000470503 NRXN3Q9Y4C0 1643 aa29.24■■■□□ 2.27
GCFC2-207ENST00000470503 XRN1Q8IZH2 1706 aaKnown RBP29.23■■■□□ 2.27
GCFC2-207ENST00000470503 VGFO15240 615 aaPredicted RBP29.23■■■□□ 2.27
GCFC2-207ENST00000470503 MEX3CQ5U5Q3 659 aaKnown RBP29.23■■■□□ 2.27
GCFC2-207ENST00000470503 RPGRIP1LQ68CZ1 1315 aa29.2■■■□□ 2.27
GCFC2-207ENST00000470503 NEXMIFQ5QGS0 1516 aa29.19■■■□□ 2.26
GCFC2-207ENST00000470503 MST1RQ04912 1400 aa29.19■■■□□ 2.26
GCFC2-207ENST00000470503 TRIM52Q96A61 297 aa29.18■■■□□ 2.26
GCFC2-207ENST00000470503 HFM1A2PYH4 1435 aa29.18■■■□□ 2.26
GCFC2-207ENST00000470503 ADGRL3Q9HAR2 1447 aa29.18■■■□□ 2.26
GCFC2-207ENST00000470503 CLTCL1P53675 1640 aa29.17■■■□□ 2.26
GCFC2-207ENST00000470503 LRRC59Q96AG4 307 aaKnown RBP29.17■■■□□ 2.26
GCFC2-207ENST00000470503 SETD5Q9C0A6 1442 aa29.17■■■□□ 2.26
GCFC2-207ENST00000470503 LRP6O75581 1613 aa29.16■■■□□ 2.26
GCFC2-207ENST00000470503 SHPRHQ149N8 1683 aa29.16■■■□□ 2.26
GCFC2-207ENST00000470503 ASXL1Q8IXJ9 1541 aa29.15■■■□□ 2.26
GCFC2-207ENST00000470503 SLC4A1APQ9BWU0 796 aaKnown RBP29.14■■■□□ 2.26
GCFC2-207ENST00000470503 PTCH1Q13635 1447 aa29.11■■■□□ 2.25
GCFC2-207ENST00000470503 KIF1BO60333 1816 aa29.1■■■□□ 2.25
GCFC2-207ENST00000470503 PRAG1Q86YV5 1406 aa29.08■■■□□ 2.25
GCFC2-207ENST00000470503 NUTM2BA6NNL0 878 aaPredicted RBP29.06■■■□□ 2.24
GCFC2-207ENST00000470503 NUTM2EB1AL46 878 aaPredicted RBP29.06■■■□□ 2.24
GCFC2-207ENST00000470503 NUTM2AQ8IVF1 878 aaPredicted RBP29.06■■■□□ 2.24
GCFC2-207ENST00000470503 RXRBP28702 533 aa29.05■■■□□ 2.24
GCFC2-207ENST00000470503 NHSL1Q5SYE7 1610 aa29.03■■■□□ 2.24
GCFC2-207ENST00000470503 C1orf167Q5SNV9 1468 aa29.03■■■□□ 2.24
GCFC2-207ENST00000470503 ROBO2Q9HCK4 1378 aa29.01■■■□□ 2.23
GCFC2-207ENST00000470503 PNPLA6Q8IY17 1366 aa29■■■□□ 2.23
GCFC2-207ENST00000470503 ACIN1Q9UKV3 1341 aaKnown RBP28.99■■■□□ 2.23
GCFC2-207ENST00000470503 CDK12Q9NYV4 1490 aaPredicted RBP28.99■■■□□ 2.23
GCFC2-207ENST00000470503 AFF2P51816 1311 aa28.98■■■□□ 2.23
GCFC2-207ENST00000470503 NALCNQ8IZF0 1738 aa28.97■■■□□ 2.23
GCFC2-207ENST00000470503 SOS2Q07890 1332 aaPredicted RBP28.96■■■□□ 2.23
GCFC2-207ENST00000470503 DDX17Q92841 729 aaKnown RBP28.95■■■□□ 2.22
GCFC2-207ENST00000470503 UPF1Q92900 1129 aaKnown RBP eCLIP28.94■■■□□ 2.22
GCFC2-207ENST00000470503 CCDC144AA2RUR9 1427 aa28.94■■■□□ 2.22
GCFC2-207ENST00000470503 SETD1AO15047 1707 aaKnown RBP28.93■■■□□ 2.22
GCFC2-207ENST00000470503 ANKRD30BQ9BXX2 1392 aa28.92■■■□□ 2.22
GCFC2-207ENST00000470503 C8orf37Q96NL8 207 aa28.92■■■□□ 2.22
GCFC2-207ENST00000470503 ORAI2Q96SN7 254 aa28.92■■■□□ 2.22
GCFC2-207ENST00000470503 LAMC1P11047 1609 aa28.91■■■□□ 2.22
GCFC2-207ENST00000470503 RBM6P78332 1123 aaKnown RBP28.9■■■□□ 2.22
GCFC2-207ENST00000470503 QTRT2Q9H974 415 aaKnown RBP28.9■■■□□ 2.22
GCFC2-207ENST00000470503 PPLO60437 1756 aa28.89■■■□□ 2.22
GCFC2-207ENST00000470503 MPHOSPH9Q99550 1183 aa28.89■■■□□ 2.22
GCFC2-207ENST00000470503 FOXD1Q16676 465 aa28.88■■■□□ 2.21
GCFC2-207ENST00000470503 NGLY1Q96IV0 654 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms