RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 PAXIP1Q6ZW49 1069 aaPredicted RBP11.67□□□□□ -0.54
VPS8-219ENST00000469479 CFAP44Q96MT7 982 aa11.66□□□□□ -0.54
VPS8-219ENST00000469479 PRR20EP86478 221 aa11.64□□□□□ -0.55
VPS8-219ENST00000469479 PRR20CP86479 221 aa11.64□□□□□ -0.55
VPS8-219ENST00000469479 PRR20DP86480 221 aa11.64□□□□□ -0.55
VPS8-219ENST00000469479 PRR20BP86481 221 aa11.64□□□□□ -0.55
VPS8-219ENST00000469479 PRR20AP86496 221 aa11.64□□□□□ -0.55
VPS8-219ENST00000469479 PCDHB3Q9Y5E6 796 aa11.64□□□□□ -0.55
VPS8-219ENST00000469479 SPRYD7Q5W111 196 aa11.63□□□□□ -0.55
VPS8-219ENST00000469479 ZNF598Q86UK7 904 aaKnown RBP11.62□□□□□ -0.55
VPS8-219ENST00000469479 FAM187AA6NFU0 413 aa11.61□□□□□ -0.55
VPS8-219ENST00000469479 RNF223E7ERA6 249 aa11.61□□□□□ -0.55
VPS8-219ENST00000469479 LCE2AQ5TA79 106 aaPredicted RBP11.61□□□□□ -0.55
VPS8-219ENST00000469479 DNAJB2P25686 324 aa11.58□□□□□ -0.56
VPS8-219ENST00000469479 EMID1Q96A84 441 aaPredicted RBP11.58□□□□□ -0.56
VPS8-219ENST00000469479 BLOC1S3Q6QNY0 202 aa11.57□□□□□ -0.56
VPS8-219ENST00000469479 RBM46Q8TBY0 533 aaKnown RBP11.57□□□□□ -0.56
VPS8-219ENST00000469479 ARHGEF1Q92888 912 aaKnown RBP11.56□□□□□ -0.56
VPS8-219ENST00000469479 KMT5BQ4FZB7 885 aa11.55□□□□□ -0.56
VPS8-219ENST00000469479 ZNF697Q5TEC3 545 aa11.55□□□□□ -0.56
VPS8-219ENST00000469479 ANKLE1Q8NAG6 615 aa11.55□□□□□ -0.56
VPS8-219ENST00000469479 PTGDRQ13258 359 aa11.54□□□□□ -0.56
VPS8-219ENST00000469479 TMEM134Q9H6X4 195 aa11.54□□□□□ -0.56
VPS8-219ENST00000469479 TNFRSF10AO00220 468 aa11.53□□□□□ -0.56
VPS8-219ENST00000469479 ST8SIA5O15466 376 aa11.53□□□□□ -0.56
VPS8-219ENST00000469479 ACTN4O43707 911 aaKnown RBP11.53□□□□□ -0.56
VPS8-219ENST00000469479 AAASQ9NRG9 546 aa11.53□□□□□ -0.56
VPS8-219ENST00000469479 AMER1Q5JTC6 1135 aaPredicted RBP11.52□□□□□ -0.57
VPS8-219ENST00000469479 STK17AQ9UEE5 414 aa11.52□□□□□ -0.57
VPS8-219ENST00000469479 GDF9O60383 454 aa11.51□□□□□ -0.57
VPS8-219ENST00000469479 WFS1O76024 890 aa11.51□□□□□ -0.57
VPS8-219ENST00000469479 ADGRG1Q9Y653 693 aa11.51□□□□□ -0.57
VPS8-219ENST00000469479 MLLT3P42568 568 aaPredicted RBP11.5□□□□□ -0.57
VPS8-219ENST00000469479 LIAT1Q6ZQX7 453 aa11.5□□□□□ -0.57
VPS8-219ENST00000469479 RCCD1A6NED2 376 aa11.48□□□□□ -0.57
VPS8-219ENST00000469479 PPEF1O14829 653 aaPredicted RBP11.48□□□□□ -0.57
VPS8-219ENST00000469479 TLL1O43897 1013 aa11.48□□□□□ -0.57
VPS8-219ENST00000469479 NR1I2O75469 434 aa11.47□□□□□ -0.57
VPS8-219ENST00000469479 CFHP08603 1231 aa11.47□□□□□ -0.57
VPS8-219ENST00000469479 S1PR4O95977 384 aa11.46□□□□□ -0.57
VPS8-219ENST00000469479 ADH1BP00325 375 aa11.45□□□□□ -0.58
VPS8-219ENST00000469479 INSM1Q01101 510 aaPredicted RBP11.45□□□□□ -0.58
VPS8-219ENST00000469479 NUTM2FA1L443 756 aa11.44□□□□□ -0.58
VPS8-219ENST00000469479 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.43□□□□□ -0.58
VPS8-219ENST00000469479 RSPH4AQ5TD94 716 aa11.42□□□□□ -0.58
VPS8-219ENST00000469479 SLC6A16Q9GZN6 736 aa11.42□□□□□ -0.58
VPS8-219ENST00000469479 KCNV2Q8TDN2 545 aa11.41□□□□□ -0.58
VPS8-219ENST00000469479 C11orf95C9JLR9 678 aaPredicted RBP11.4□□□□□ -0.58
VPS8-219ENST00000469479 FCHSD2O94868 740 aa11.4□□□□□ -0.58
VPS8-219ENST00000469479 OATP04181 439 aa11.4□□□□□ -0.58
VPS8-219ENST00000469479 SLC10A3P09131 477 aa11.4□□□□□ -0.58
VPS8-219ENST00000469479 WIPF1O43516 503 aa11.39□□□□□ -0.59
VPS8-219ENST00000469479 CRIPAKQ8N1N5 446 aa11.39□□□□□ -0.59
VPS8-219ENST00000469479 FOXC1Q12948 553 aa11.38□□□□□ -0.59
VPS8-219ENST00000469479 FAM161AQ3B820 660 aa11.38□□□□□ -0.59
VPS8-219ENST00000469479 SCUBE3Q8IX30 993 aa11.38□□□□□ -0.59
VPS8-219ENST00000469479 DACH1Q9UI36 760 aa11.38□□□□□ -0.59
VPS8-219ENST00000469479 LMOD2Q6P5Q4 547 aa11.37□□□□□ -0.59
VPS8-219ENST00000469479 GMPR2Q9P2T1 348 aaKnown RBP11.37□□□□□ -0.59
VPS8-219ENST00000469479 NFX1Q12986 1120 aaKnown RBP11.36□□□□□ -0.59
VPS8-219ENST00000469479 AXIN1O15169 862 aa11.35□□□□□ -0.59
VPS8-219ENST00000469479 PXYLP1Q8TE99 480 aa11.35□□□□□ -0.59
VPS8-219ENST00000469479 SPSB2Q99619 263 aa11.34□□□□□ -0.59
VPS8-219ENST00000469479 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
VPS8-219ENST00000469479 PKD2L1Q9P0L9 805 aa11.34□□□□□ -0.59
VPS8-219ENST00000469479 PLA2G2CQ5R387 149 aa11.33□□□□□ -0.6
VPS8-219ENST00000469479 RTN4Q9NQC3 1192 aaKnown RBP11.33□□□□□ -0.6
VPS8-219ENST00000469479 P3H3Q8IVL6 736 aa11.32□□□□□ -0.6
VPS8-219ENST00000469479 AVPP01185 164 aa11.31□□□□□ -0.6
VPS8-219ENST00000469479 RPIAP49247 311 aa11.31□□□□□ -0.6
VPS8-219ENST00000469479 CTC1Q2NKJ3 1217 aa11.31□□□□□ -0.6
VPS8-219ENST00000469479 HIC1Q14526 733 aa11.3□□□□□ -0.6
VPS8-219ENST00000469479 PUS10Q3MIT2 529 aaKnown RBP11.29□□□□□ -0.6
VPS8-219ENST00000469479 CD2BP2O95400 341 aaKnown RBP11.28□□□□□ -0.6
VPS8-219ENST00000469479 METTL3Q86U44 580 aaKnown RBP11.28□□□□□ -0.6
VPS8-219ENST00000469479 CYP4X1Q8N118 509 aa11.28□□□□□ -0.6
VPS8-219ENST00000469479 TOR4AQ9NXH8 423 aa11.26□□□□□ -0.61
VPS8-219ENST00000469479 SMCPP49901 116 aaPredicted RBP11.25□□□□□ -0.61
VPS8-219ENST00000469479 DAXXQ9UER7 740 aaPredicted RBP11.25□□□□□ -0.61
VPS8-219ENST00000469479 LOC100996750A0A140TA64 210 aa11.24□□□□□ -0.61
VPS8-219ENST00000469479 SEMA3EO15041 775 aa11.24□□□□□ -0.61
VPS8-219ENST00000469479 KRTAP4-6Q9BYQ5 205 aa11.24□□□□□ -0.61
VPS8-219ENST00000469479 FAM181BA6NEQ2 426 aa11.23□□□□□ -0.61
VPS8-219ENST00000469479 MORN1Q5T089 497 aa11.23□□□□□ -0.61
VPS8-219ENST00000469479 RDH13Q8NBN7 331 aa11.23□□□□□ -0.61
VPS8-219ENST00000469479 TERTO14746 1132 aaKnown RBP11.22□□□□□ -0.61
VPS8-219ENST00000469479 FMNL1O95466 1100 aaPredicted RBP11.22□□□□□ -0.61
VPS8-219ENST00000469479 ATP6V1AP38606 617 aa11.22□□□□□ -0.61
VPS8-219ENST00000469479 THAP11Q96EK4 314 aa11.22□□□□□ -0.61
VPS8-219ENST00000469479 FCF1Q9Y324 198 aaKnown RBP11.22□□□□□ -0.61
VPS8-219ENST00000469479 SALL2Q9Y467 1007 aaPredicted RBP11.21□□□□□ -0.61
VPS8-219ENST00000469479 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
VPS8-219ENST00000469479 GNPATO15228 680 aa11.19□□□□□ -0.62
VPS8-219ENST00000469479 FUT2Q10981 343 aa11.19□□□□□ -0.62
VPS8-219ENST00000469479 SULF1Q8IWU6 871 aa11.18□□□□□ -0.62
VPS8-219ENST00000469479 ABCC9O60706 1549 aa11.18□□□□□ -0.62
VPS8-219ENST00000469479 TTC24A2A3L6 582 aaPredicted RBP11.17□□□□□ -0.62
VPS8-219ENST00000469479 DDX11L8A8MPP1 907 aa11.17□□□□□ -0.62
VPS8-219ENST00000469479 ZBTB24O43167 697 aaPredicted RBP11.17□□□□□ -0.62
VPS8-219ENST00000469479 LCE2CQ5TA81 110 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms