RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 WASHC2CQ9Y4E1 1318 aa23.58■■□□□ 1.37
MCF2L-221ENST00000469415 UHRF1BP1LA0JNW5 1464 aa23.58■■□□□ 1.37
MCF2L-221ENST00000469415 APAF1O14727 1248 aa23.57■■□□□ 1.36
MCF2L-221ENST00000469415 NBR1Q14596 966 aa23.57■■□□□ 1.36
MCF2L-221ENST00000469415 ZFYVE16Q7Z3T8 1539 aa23.57■■□□□ 1.36
MCF2L-221ENST00000469415 E9PCH4 1651 aa23.56■■□□□ 1.36
MCF2L-221ENST00000469415 PAK3O75914 559 aaPredicted RBP23.56■■□□□ 1.36
MCF2L-221ENST00000469415 SLC12A5Q9H2X9 1139 aa23.56■■□□□ 1.36
MCF2L-221ENST00000469415 CARD14Q9BXL6 1004 aa23.55■■□□□ 1.36
MCF2L-221ENST00000469415 STK26Q9P289 416 aa23.55■■□□□ 1.36
MCF2L-221ENST00000469415 ATP7AQ04656 1500 aa23.55■■□□□ 1.36
MCF2L-221ENST00000469415 PDE3BQ13370 1112 aa23.54■■□□□ 1.36
MCF2L-221ENST00000469415 SCAF11Q99590 1463 aaKnown RBP23.53■■□□□ 1.36
MCF2L-221ENST00000469415 RRP7AQ9Y3A4 280 aaKnown RBP23.52■■□□□ 1.36
MCF2L-221ENST00000469415 RTEL1-TNFRSF6BF6WH68 1400 aa23.52■■□□□ 1.36
MCF2L-221ENST00000469415 PLEKHH1Q9ULM0 1364 aa23.52■■□□□ 1.36
MCF2L-221ENST00000469415 CLTCL1P53675 1640 aa23.52■■□□□ 1.36
MCF2L-221ENST00000469415 SPINK5Q9NQ38 1064 aaPredicted RBP23.5■■□□□ 1.35
MCF2L-221ENST00000469415 NOS1P29475 1434 aa23.49■■□□□ 1.35
MCF2L-221ENST00000469415 EIF2AK4Q9P2K8 1649 aaKnown RBP23.47■■□□□ 1.35
MCF2L-221ENST00000469415 PTPRTO14522 1441 aa23.47■■□□□ 1.35
MCF2L-221ENST00000469415 EIF3AQ14152 1382 aaKnown RBP23.47■■□□□ 1.35
MCF2L-221ENST00000469415 ANP32AP39687 249 aaKnown RBP23.47■■□□□ 1.35
MCF2L-221ENST00000469415 GOLGA2Q08379 1002 aa23.47■■□□□ 1.35
MCF2L-221ENST00000469415 CYB5RLQ6IPT4 315 aa23.47■■□□□ 1.35
MCF2L-221ENST00000469415 CD109Q6YHK3 1445 aa23.46■■□□□ 1.35
MCF2L-221ENST00000469415 DMRT2Q9Y5R5 561 aa23.46■■□□□ 1.35
MCF2L-221ENST00000469415 TRPM2O94759 1503 aa23.45■■□□□ 1.34
MCF2L-221ENST00000469415 CENPJQ9HC77 1338 aaPredicted RBP23.45■■□□□ 1.34
MCF2L-221ENST00000469415 MORC1Q86VD1 984 aa23.44■■□□□ 1.34
MCF2L-221ENST00000469415 MADDQ8WXG6 1647 aa23.44■■□□□ 1.34
MCF2L-221ENST00000469415 DUSP27Q5VZP5 1158 aa23.43■■□□□ 1.34
MCF2L-221ENST00000469415 NOP58Q9Y2X3 529 aaKnown RBP23.43■■□□□ 1.34
MCF2L-221ENST00000469415 BCAR3O75815 825 aa23.42■■□□□ 1.34
MCF2L-221ENST00000469415 CABP2Q9NPB3 220 aa23.41■■□□□ 1.34
MCF2L-221ENST00000469415 BLMP54132 1417 aaPredicted RBP23.38■■□□□ 1.33
MCF2L-221ENST00000469415 PDE4AP27815 886 aa23.38■■□□□ 1.33
MCF2L-221ENST00000469415 SPHKAPQ2M3C7 1700 aa23.38■■□□□ 1.33
MCF2L-221ENST00000469415 MLECQ14165 292 aa23.38■■□□□ 1.33
MCF2L-221ENST00000469415 RGS3P49796 1198 aa23.37■■□□□ 1.33
MCF2L-221ENST00000469415 ZBTB47Q9UFB7 747 aaPredicted RBP23.36■■□□□ 1.33
MCF2L-221ENST00000469415 STAC3Q96MF2 364 aa23.35■■□□□ 1.33
MCF2L-221ENST00000469415 FRAT1Q92837 279 aaPredicted RBP23.35■■□□□ 1.33
MCF2L-221ENST00000469415 BCL2L13Q9BXK5 485 aa23.35■■□□□ 1.33
MCF2L-221ENST00000469415 NPATQ14207 1427 aa23.35■■□□□ 1.33
MCF2L-221ENST00000469415 ASXL1Q8IXJ9 1541 aa23.34■■□□□ 1.33
MCF2L-221ENST00000469415 IDI1Q13907 227 aa23.34■■□□□ 1.33
MCF2L-221ENST00000469415 ERVK-7P63135 1459 aa23.34■■□□□ 1.33
MCF2L-221ENST00000469415 CANXP27824 592 aaKnown RBP23.34■■□□□ 1.33
MCF2L-221ENST00000469415 SRPK2P78362 688 aaKnown RBP23.33■■□□□ 1.33
MCF2L-221ENST00000469415 FBXO31Q5XUX0 539 aaPredicted RBP23.33■■□□□ 1.33
MCF2L-221ENST00000469415 MTHFSP49914 203 aa23.33■■□□□ 1.32
MCF2L-221ENST00000469415 SLFN5Q08AF3 891 aa23.33■■□□□ 1.32
MCF2L-221ENST00000469415 ZNF518AQ6AHZ1 1483 aa23.32■■□□□ 1.32
MCF2L-221ENST00000469415 NSD3Q9BZ95 1437 aa23.32■■□□□ 1.32
MCF2L-221ENST00000469415 TET3O43151 1660 aa23.32■■□□□ 1.32
MCF2L-221ENST00000469415 STAG3Q9UJ98 1225 aa23.32■■□□□ 1.32
MCF2L-221ENST00000469415 IPO9Q96P70 1041 aaKnown RBP23.31■■□□□ 1.32
MCF2L-221ENST00000469415 C14orf93Q9H972 538 aaKnown RBP23.31■■□□□ 1.32
MCF2L-221ENST00000469415 INO80Q9ULG1 1556 aaPredicted RBP23.31■■□□□ 1.32
MCF2L-221ENST00000469415 MINK1Q8N4C8 1332 aaPredicted RBP23.31■■□□□ 1.32
MCF2L-221ENST00000469415 ABCA9Q8IUA7 1624 aa23.3■■□□□ 1.32
MCF2L-221ENST00000469415 RNF17Q9BXT8 1623 aaKnown RBP23.3■■□□□ 1.32
MCF2L-221ENST00000469415 LAS1LQ9Y4W2 734 aaKnown RBP23.3■■□□□ 1.32
MCF2L-221ENST00000469415 LAMC1P11047 1609 aa23.3■■□□□ 1.32
MCF2L-221ENST00000469415 TCERG1O14776 1098 aaKnown RBP23.29■■□□□ 1.32
MCF2L-221ENST00000469415 GGNBP2Q9H3C7 697 aa23.27■■□□□ 1.32
MCF2L-221ENST00000469415 KIDINS220Q9ULH0 1771 aa23.27■■□□□ 1.32
MCF2L-221ENST00000469415 IQGAP1P46940 1657 aa23.27■■□□□ 1.32
MCF2L-221ENST00000469415 ZMYM4Q5VZL5 1548 aa23.26■■□□□ 1.31
MCF2L-221ENST00000469415 CEP152O94986 1710 aa23.26■■□□□ 1.31
MCF2L-221ENST00000469415 U2SURPO15042 1029 aaKnown RBP23.26■■□□□ 1.31
MCF2L-221ENST00000469415 U2AF1L5P0DN76 240 aaPredicted RBP23.26■■□□□ 1.31
MCF2L-221ENST00000469415 U2AF1Q01081 240 aaKnown RBP eCLIP23.26■■□□□ 1.31
MCF2L-221ENST00000469415 MROH1Q8NDA8 1641 aa23.26■■□□□ 1.31
MCF2L-221ENST00000469415 ARAP3Q8WWN8 1544 aa23.26■■□□□ 1.31
MCF2L-221ENST00000469415 PANK1Q8TE04 598 aa23.26■■□□□ 1.31
MCF2L-221ENST00000469415 SLC4A3P48751 1232 aa23.25■■□□□ 1.31
MCF2L-221ENST00000469415 ABCA6Q8N139 1617 aa23.25■■□□□ 1.31
MCF2L-221ENST00000469415 CLUAP1Q96AJ1 413 aa23.25■■□□□ 1.31
MCF2L-221ENST00000469415 ZNF521Q96K83 1311 aa23.25■■□□□ 1.31
MCF2L-221ENST00000469415 PPRC1Q5VV67 1664 aaKnown RBP23.25■■□□□ 1.31
MCF2L-221ENST00000469415 TCP11L2Q8N4U5 519 aa23.25■■□□□ 1.31
MCF2L-221ENST00000469415 PPM1GO15355 546 aaPredicted RBP23.24■■□□□ 1.31
MCF2L-221ENST00000469415 FBLN1P23142 703 aa23.24■■□□□ 1.31
MCF2L-221ENST00000469415 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.24■■□□□ 1.31
MCF2L-221ENST00000469415 POGKQ9P215 609 aa23.24■■□□□ 1.31
MCF2L-221ENST00000469415 COG6Q9Y2V7 657 aa23.24■■□□□ 1.31
MCF2L-221ENST00000469415 VGFO15240 615 aaPredicted RBP23.24■■□□□ 1.31
MCF2L-221ENST00000469415 POGZQ7Z3K3 1410 aa23.23■■□□□ 1.31
MCF2L-221ENST00000469415 EFCAB6Q5THR3 1501 aa23.23■■□□□ 1.31
MCF2L-221ENST00000469415 BACH2Q9BYV9 841 aa23.23■■□□□ 1.31
MCF2L-221ENST00000469415 WWC1Q8IX03 1113 aa23.23■■□□□ 1.31
MCF2L-221ENST00000469415 DEPDC5O75140 1603 aa23.23■■□□□ 1.31
MCF2L-221ENST00000469415 TNNQ9UQP3 1299 aa23.22■■□□□ 1.31
MCF2L-221ENST00000469415 FAM69CQ0P6D2 419 aa23.22■■□□□ 1.31
MCF2L-221ENST00000469415 MAP3K4Q9Y6R4 1608 aa23.22■■□□□ 1.31
MCF2L-221ENST00000469415 VWDEQ8N2E2 1590 aa23.21■■□□□ 1.31
MCF2L-221ENST00000469415 PLPPR3Q6T4P5 718 aa23.2■■□□□ 1.3
MCF2L-221ENST00000469415 PIK3C2GO75747 1445 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms