RNA–Protein interactions for RNA: ENST00000468600.1

SSB-208, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-208ENST00000468600 LIAT1Q6ZQX7 453 aa10.61□□□□□ -0.71
SSB-208ENST00000468600 SLF2Q8IX21 1173 aa10.61□□□□□ -0.71
SSB-208ENST00000468600 TTC13Q8NBP0 860 aa10.61□□□□□ -0.71
SSB-208ENST00000468600 AAASQ9NRG9 546 aa10.61□□□□□ -0.71
SSB-208ENST00000468600 GRXCR2A6NFK2 248 aa10.6□□□□□ -0.71
SSB-208ENST00000468600 TNFRSF10AO00220 468 aa10.6□□□□□ -0.71
SSB-208ENST00000468600 ZNF697Q5TEC3 545 aa10.6□□□□□ -0.71
SSB-208ENST00000468600 SPRYD3Q8NCJ5 442 aa10.6□□□□□ -0.71
SSB-208ENST00000468600 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.6□□□□□ -0.71
SSB-208ENST00000468600 BLOC1S3Q6QNY0 202 aa10.59□□□□□ -0.71
SSB-208ENST00000468600 ANKLE1Q8NAG6 615 aa10.59□□□□□ -0.71
SSB-208ENST00000468600 WDR70Q9NW82 654 aa10.59□□□□□ -0.71
SSB-208ENST00000468600 PCDHB3Q9Y5E6 796 aa10.58□□□□□ -0.72
SSB-208ENST00000468600 PPEF1O14829 653 aaPredicted RBP10.57□□□□□ -0.72
SSB-208ENST00000468600 AMER1Q5JTC6 1135 aaPredicted RBP10.56□□□□□ -0.72
SSB-208ENST00000468600 S1PR4O95977 384 aa10.55□□□□□ -0.72
SSB-208ENST00000468600 OSBPP22059 807 aa10.55□□□□□ -0.72
SSB-208ENST00000468600 ARIH1Q9Y4X5 557 aaPredicted RBP10.55□□□□□ -0.72
SSB-208ENST00000468600 PADI6Q6TGC4 694 aa10.54□□□□□ -0.72
SSB-208ENST00000468600 PRR14Q9BWN1 585 aa10.53□□□□□ -0.72
SSB-208ENST00000468600 PLA2G2CQ5R387 149 aa10.52□□□□□ -0.73
SSB-208ENST00000468600 EYA1Q99502 592 aa10.52□□□□□ -0.73
SSB-208ENST00000468600 NPDC1Q9NQX5 325 aaPredicted RBP10.52□□□□□ -0.73
SSB-208ENST00000468600 STK17AQ9UEE5 414 aa10.52□□□□□ -0.73
SSB-208ENST00000468600 DACH1Q9UI36 760 aa10.52□□□□□ -0.73
SSB-208ENST00000468600 WFS1O76024 890 aa10.51□□□□□ -0.73
SSB-208ENST00000468600 CRIPAKQ8N1N5 446 aa10.49□□□□□ -0.73
SSB-208ENST00000468600 PKD2L1Q9P0L9 805 aa10.49□□□□□ -0.73
SSB-208ENST00000468600 SLC4A3P48751 1232 aa10.48□□□□□ -0.73
SSB-208ENST00000468600 NFX1Q12986 1120 aaKnown RBP10.48□□□□□ -0.73
SSB-208ENST00000468600 WIPF1O43516 503 aa10.47□□□□□ -0.73
SSB-208ENST00000468600 CFAP44Q96MT7 982 aa10.47□□□□□ -0.73
SSB-208ENST00000468600 GMPR2Q9P2T1 348 aaKnown RBP10.46□□□□□ -0.73
SSB-208ENST00000468600 LCE2CQ5TA81 110 aa10.45□□□□□ -0.74
SSB-208ENST00000468600 PAXIP1Q6ZW49 1069 aaPredicted RBP10.45□□□□□ -0.74
SSB-208ENST00000468600 ADH1BP00325 375 aa10.44□□□□□ -0.74
SSB-208ENST00000468600 RTN4Q9NQC3 1192 aaKnown RBP10.44□□□□□ -0.74
SSB-208ENST00000468600 ACTN4O43707 911 aaKnown RBP10.43□□□□□ -0.74
SSB-208ENST00000468600 AVPP01185 164 aa10.43□□□□□ -0.74
SSB-208ENST00000468600 LOC100996750A0A140TA64 210 aa10.41□□□□□ -0.74
SSB-208ENST00000468600 LMOD2Q6P5Q4 547 aa10.41□□□□□ -0.74
SSB-208ENST00000468600 KRTAP4-6Q9BYQ5 205 aa10.41□□□□□ -0.74
SSB-208ENST00000468600 C11orf95C9JLR9 678 aaPredicted RBP10.4□□□□□ -0.74
SSB-208ENST00000468600 FOXC1Q12948 553 aa10.4□□□□□ -0.74
SSB-208ENST00000468600 INSM1Q01101 510 aaPredicted RBP10.39□□□□□ -0.75
SSB-208ENST00000468600 TOR4AQ9NXH8 423 aa10.39□□□□□ -0.75
SSB-208ENST00000468600 SLC6A16Q9GZN6 736 aa10.38□□□□□ -0.75
SSB-208ENST00000468600 CFHP08603 1231 aa10.37□□□□□ -0.75
SSB-208ENST00000468600 DNAJB2P25686 324 aa10.37□□□□□ -0.75
SSB-208ENST00000468600 TMEM134Q9H6X4 195 aa10.37□□□□□ -0.75
SSB-208ENST00000468600 AXIN1O15169 862 aa10.36□□□□□ -0.75
SSB-208ENST00000468600 KMT5BQ4FZB7 885 aa10.36□□□□□ -0.75
SSB-208ENST00000468600 SMCPP49901 116 aaPredicted RBP10.34□□□□□ -0.75
SSB-208ENST00000468600 NR1I2O75469 434 aa10.33□□□□□ -0.76
SSB-208ENST00000468600 CTC1Q2NKJ3 1217 aa10.33□□□□□ -0.76
SSB-208ENST00000468600 SLC10A3P09131 477 aa10.32□□□□□ -0.76
SSB-208ENST00000468600 RPIAP49247 311 aa10.3□□□□□ -0.76
SSB-208ENST00000468600 RBM46Q8TBY0 533 aaKnown RBP10.3□□□□□ -0.76
SSB-208ENST00000468600 ADGRG1Q9Y653 693 aa10.3□□□□□ -0.76
SSB-208ENST00000468600 SCUBE3Q8IX30 993 aa10.29□□□□□ -0.76
SSB-208ENST00000468600 CYP4X1Q8N118 509 aa10.29□□□□□ -0.76
SSB-208ENST00000468600 RCCD1A6NED2 376 aa10.28□□□□□ -0.76
SSB-208ENST00000468600 SNRPBP14678 240 aaKnown RBP10.28□□□□□ -0.76
SSB-208ENST00000468600 TERTO14746 1132 aaKnown RBP10.27□□□□□ -0.77
SSB-208ENST00000468600 ARHGEF1Q92888 912 aaKnown RBP10.27□□□□□ -0.77
SSB-208ENST00000468600 MLLT3P42568 568 aaPredicted RBP10.26□□□□□ -0.77
SSB-208ENST00000468600 SPSB2Q99619 263 aa10.26□□□□□ -0.77
SSB-208ENST00000468600 PTGDRQ13258 359 aa10.25□□□□□ -0.77
SSB-208ENST00000468600 FAM161AQ3B820 660 aa10.24□□□□□ -0.77
SSB-208ENST00000468600 PUS10Q3MIT2 529 aaKnown RBP10.24□□□□□ -0.77
SSB-208ENST00000468600 ATP13A2Q9NQ11 1180 aa10.24□□□□□ -0.77
SSB-208ENST00000468600 FCF1Q9Y324 198 aaKnown RBP10.24□□□□□ -0.77
SSB-208ENST00000468600 TRIM47Q96LD4 638 aa10.22□□□□□ -0.77
SSB-208ENST00000468600 NUTM2FA1L443 756 aa10.21□□□□□ -0.77
SSB-208ENST00000468600 CD2BP2O95400 341 aaKnown RBP10.21□□□□□ -0.77
SSB-208ENST00000468600 KCNV2Q8TDN2 545 aa10.21□□□□□ -0.77
SSB-208ENST00000468600 SMPD1P17405 629 aa10.2□□□□□ -0.78
SSB-208ENST00000468600 LORP23490 312 aaPredicted RBP10.2□□□□□ -0.78
SSB-208ENST00000468600 TTC24A2A3L6 582 aaPredicted RBP10.18□□□□□ -0.78
SSB-208ENST00000468600 THAP11Q96EK4 314 aa10.18□□□□□ -0.78
SSB-208ENST00000468600 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.17□□□□□ -0.78
SSB-208ENST00000468600 FCHSD2O94868 740 aa10.16□□□□□ -0.78
SSB-208ENST00000468600 FAM160A2Q8N612 972 aaPredicted RBP10.16□□□□□ -0.78
SSB-208ENST00000468600 SENP2Q9HC62 589 aa10.15□□□□□ -0.78
SSB-208ENST00000468600 PRDM9Q9NQV7 894 aa10.15□□□□□ -0.78
SSB-208ENST00000468600 P3H3Q8IVL6 736 aa10.14□□□□□ -0.79
SSB-208ENST00000468600 TSHZ2Q9NRE2 1034 aa10.14□□□□□ -0.79
SSB-208ENST00000468600 WNT7AO00755 349 aa10.13□□□□□ -0.79
SSB-208ENST00000468600 MORN1Q5T089 497 aa10.13□□□□□ -0.79
SSB-208ENST00000468600 RSPH4AQ5TD94 716 aa10.13□□□□□ -0.79
SSB-208ENST00000468600 J3QL48 77 aa10.12□□□□□ -0.79
SSB-208ENST00000468600 SNIP1Q8TAD8 396 aaKnown RBP10.12□□□□□ -0.79
SSB-208ENST00000468600 FAM181BA6NEQ2 426 aa10.11□□□□□ -0.79
SSB-208ENST00000468600 OATP04181 439 aa10.11□□□□□ -0.79
SSB-208ENST00000468600 GMPRP36959 345 aa10.1□□□□□ -0.79
SSB-208ENST00000468600 PXYLP1Q8TE99 480 aa10.1□□□□□ -0.79
SSB-208ENST00000468600 HPS1Q92902 700 aa10.09□□□□□ -0.79
SSB-208ENST00000468600 ZSCAN1Q8NBB4 408 aa10.08□□□□□ -0.8
SSB-208ENST00000468600 KIFC2Q96AC6 838 aa10.08□□□□□ -0.8
SSB-208ENST00000468600 MRGPRX2Q96LB1 330 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms