RNA–Protein interactions for RNA: ENST00000467825.2

RPL13A-202, Transcript of ribosomal protein L13a, humanhuman

TSL 5

Gene RPL13A, Length 660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-202ENST00000467825 KCNA6P17658 529 aa22.77■■□□□ 1.24
RPL13A-202ENST00000467825 XIRP1Q702N8 1843 aaKnown RBP22.77■■□□□ 1.24
RPL13A-202ENST00000467825 SPHKAPQ2M3C7 1700 aa22.77■■□□□ 1.23
RPL13A-202ENST00000467825 CHGAP10645 457 aaKnown RBP22.76■■□□□ 1.23
RPL13A-202ENST00000467825 ADAMTS13Q76LX8 1427 aa22.74■■□□□ 1.23
RPL13A-202ENST00000467825 PIP4K2BP78356 416 aa22.74■■□□□ 1.23
RPL13A-202ENST00000467825 NWD1Q149M9 1564 aa22.74■■□□□ 1.23
RPL13A-202ENST00000467825 NUTM2DQ5VT03 806 aaPredicted RBP22.73■■□□□ 1.23
RPL13A-202ENST00000467825 SENP3Q9H4L4 574 aaPredicted RBP22.73■■□□□ 1.23
RPL13A-202ENST00000467825 TRPM2O94759 1503 aa22.72■■□□□ 1.23
RPL13A-202ENST00000467825 HDGFP51858 240 aaKnown RBP22.72■■□□□ 1.23
RPL13A-202ENST00000467825 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.72■■□□□ 1.23
RPL13A-202ENST00000467825 HSPA1LP34931 641 aa22.71■■□□□ 1.23
RPL13A-202ENST00000467825 TBX22Q9Y458 520 aa22.71■■□□□ 1.23
RPL13A-202ENST00000467825 TMEM94Q12767 1356 aa22.71■■□□□ 1.23
RPL13A-202ENST00000467825 CLTCL1P53675 1640 aa22.71■■□□□ 1.23
RPL13A-202ENST00000467825 PPP1R15AO75807 674 aaPredicted RBP22.7■■□□□ 1.22
RPL13A-202ENST00000467825 NKTRP30414 1462 aaKnown RBP22.68■■□□□ 1.22
RPL13A-202ENST00000467825 TRIM52Q96A61 297 aa22.68■■□□□ 1.22
RPL13A-202ENST00000467825 RBM33Q96EV2 1170 aaKnown RBP22.68■■□□□ 1.22
RPL13A-202ENST00000467825 SCAF1Q9H7N4 1312 aaKnown RBP22.67■■□□□ 1.22
RPL13A-202ENST00000467825 BCANQ96GW7 911 aa22.67■■□□□ 1.22
RPL13A-202ENST00000467825 CHD2O14647 1828 aaKnown RBP22.66■■□□□ 1.22
RPL13A-202ENST00000467825 SLC4A1APQ9BWU0 796 aaKnown RBP22.65■■□□□ 1.22
RPL13A-202ENST00000467825 NRXN3Q9Y4C0 1643 aa22.64■■□□□ 1.22
RPL13A-202ENST00000467825 PROSER2Q86WR7 435 aaPredicted RBP22.64■■□□□ 1.21
RPL13A-202ENST00000467825 DIP2AQ14689 1571 aa22.63■■□□□ 1.21
RPL13A-202ENST00000467825 NEXMIFQ5QGS0 1516 aa22.62■■□□□ 1.21
RPL13A-202ENST00000467825 PTPRUQ92729 1446 aa22.62■■□□□ 1.21
RPL13A-202ENST00000467825 PIK3R4Q99570 1358 aa22.62■■□□□ 1.21
RPL13A-202ENST00000467825 SETBP1Q9Y6X0 1596 aa22.61■■□□□ 1.21
RPL13A-202ENST00000467825 FOXD1Q16676 465 aa22.6■■□□□ 1.21
RPL13A-202ENST00000467825 DISP3Q9P2K9 1392 aa22.6■■□□□ 1.21
RPL13A-202ENST00000467825 ZNF326Q5BKZ1 582 aaKnown RBP22.58■■□□□ 1.21
RPL13A-202ENST00000467825 MPHOSPH9Q99550 1183 aa22.57■■□□□ 1.2
RPL13A-202ENST00000467825 FAM135BQ49AJ0 1406 aa22.57■■□□□ 1.2
RPL13A-202ENST00000467825 KIF1BO60333 1816 aa22.55■■□□□ 1.2
RPL13A-202ENST00000467825 METP08581 1390 aa22.55■■□□□ 1.2
RPL13A-202ENST00000467825 ILDR2Q71H61 639 aa22.54■■□□□ 1.2
RPL13A-202ENST00000467825 SETD5Q9C0A6 1442 aa22.54■■□□□ 1.2
RPL13A-202ENST00000467825 NCOA3Q9Y6Q9 1424 aa22.54■■□□□ 1.2
RPL13A-202ENST00000467825 AMOTL2Q9Y2J4 779 aa22.53■■□□□ 1.2
RPL13A-202ENST00000467825 MSH6P52701 1360 aa22.51■■□□□ 1.19
RPL13A-202ENST00000467825 XRN1Q8IZH2 1706 aaKnown RBP22.51■■□□□ 1.19
RPL13A-202ENST00000467825 SPATA31E1Q6ZUB1 1445 aa22.48■■□□□ 1.19
RPL13A-202ENST00000467825 RPGRIP1LQ68CZ1 1315 aa22.48■■□□□ 1.19
RPL13A-202ENST00000467825 RAB3GAP2Q9H2M9 1393 aa22.48■■□□□ 1.19
RPL13A-202ENST00000467825 MED1Q15648 1581 aaPredicted RBP22.47■■□□□ 1.19
RPL13A-202ENST00000467825 ROBO1Q9Y6N7 1651 aa22.47■■□□□ 1.19
RPL13A-202ENST00000467825 SLAIN2Q9P270 581 aa22.47■■□□□ 1.19
RPL13A-202ENST00000467825 SETD1AO15047 1707 aaKnown RBP22.46■■□□□ 1.19
RPL13A-202ENST00000467825 VGFO15240 615 aaPredicted RBP22.45■■□□□ 1.18
RPL13A-202ENST00000467825 CCDC144AA2RUR9 1427 aa22.45■■□□□ 1.18
RPL13A-202ENST00000467825 PPLO60437 1756 aa22.45■■□□□ 1.18
RPL13A-202ENST00000467825 C19orf44Q9H6X5 657 aa22.44■■□□□ 1.18
RPL13A-202ENST00000467825 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.44■■□□□ 1.18
RPL13A-202ENST00000467825 ACIN1Q9UKV3 1341 aaKnown RBP22.42■■□□□ 1.18
RPL13A-202ENST00000467825 ADGRF5Q8IZF2 1346 aa22.4■■□□□ 1.18
RPL13A-202ENST00000467825 PRAG1Q86YV5 1406 aa22.4■■□□□ 1.18
RPL13A-202ENST00000467825 CADPS2Q86UW7 1296 aa22.39■■□□□ 1.17
RPL13A-202ENST00000467825 C14orf37Q86TY3 774 aa22.38■■□□□ 1.17
RPL13A-202ENST00000467825 DCCP43146 1447 aa22.38■■□□□ 1.17
RPL13A-202ENST00000467825 RGL3Q3MIN7 710 aa22.37■■□□□ 1.17
RPL13A-202ENST00000467825 IFT172Q9UG01 1749 aa22.37■■□□□ 1.17
RPL13A-202ENST00000467825 PTCH1Q13635 1447 aa22.36■■□□□ 1.17
RPL13A-202ENST00000467825 ROBO2Q9HCK4 1378 aa22.36■■□□□ 1.17
RPL13A-202ENST00000467825 ADGRL3Q9HAR2 1447 aa22.34■■□□□ 1.17
RPL13A-202ENST00000467825 ATF3P18847 181 aa22.34■■□□□ 1.17
RPL13A-202ENST00000467825 HRCP23327 699 aa22.34■■□□□ 1.17
RPL13A-202ENST00000467825 ANKRD30BQ9BXX2 1392 aa22.34■■□□□ 1.17
RPL13A-202ENST00000467825 MST1RQ04912 1400 aa22.33■■□□□ 1.17
RPL13A-202ENST00000467825 COL16A1Q07092 1604 aaPredicted RBP22.31■■□□□ 1.16
RPL13A-202ENST00000467825 NALCNQ8IZF0 1738 aa22.31■■□□□ 1.16
RPL13A-202ENST00000467825 BRINP3Q76B58 766 aa22.31■■□□□ 1.16
RPL13A-202ENST00000467825 ASXL1Q8IXJ9 1541 aa22.31■■□□□ 1.16
RPL13A-202ENST00000467825 PIK3C2GO75747 1445 aa22.31■■□□□ 1.16
RPL13A-202ENST00000467825 PHLPP1O60346 1717 aa22.3■■□□□ 1.16
RPL13A-202ENST00000467825 AHDC1Q5TGY3 1603 aaPredicted RBP22.3■■□□□ 1.16
RPL13A-202ENST00000467825 RGS17Q9UGC6 210 aaPredicted RBP22.29■■□□□ 1.16
RPL13A-202ENST00000467825 NRXN1Q9ULB1 1477 aa22.28■■□□□ 1.16
RPL13A-202ENST00000467825 SOCS7O14512 581 aa22.27■■□□□ 1.16
RPL13A-202ENST00000467825 TECPR2O15040 1411 aa22.26■■□□□ 1.15
RPL13A-202ENST00000467825 JCADQ9P266 1359 aa22.25■■□□□ 1.15
RPL13A-202ENST00000467825 MYOM2P54296 1465 aa22.24■■□□□ 1.15
RPL13A-202ENST00000467825 LRPPRCP42704 1394 aaKnown RBP22.24■■□□□ 1.15
RPL13A-202ENST00000467825 TMEM132EQ6IEE7 984 aa22.23■■□□□ 1.15
RPL13A-202ENST00000467825 ABCC11Q96J66 1382 aa22.23■■□□□ 1.15
RPL13A-202ENST00000467825 C14orf93Q9H972 538 aaKnown RBP22.22■■□□□ 1.15
RPL13A-202ENST00000467825 C1orf167Q5SNV9 1468 aa22.22■■□□□ 1.15
RPL13A-202ENST00000467825 PHF23Q9BUL5 403 aaPredicted RBP22.21■■□□□ 1.15
RPL13A-202ENST00000467825 WAPLQ7Z5K2 1190 aa22.19■■□□□ 1.14
RPL13A-202ENST00000467825 PLEKHH1Q9ULM0 1364 aa22.19■■□□□ 1.14
RPL13A-202ENST00000467825 NHSL1Q5SYE7 1610 aa22.19■■□□□ 1.14
RPL13A-202ENST00000467825 YTHDC2Q9H6S0 1430 aaKnown RBP22.18■■□□□ 1.14
RPL13A-202ENST00000467825 CFAP70Q5T0N1 1121 aa22.18■■□□□ 1.14
RPL13A-202ENST00000467825 DDX17Q92841 729 aaKnown RBP22.18■■□□□ 1.14
RPL13A-202ENST00000467825 STK26Q9P289 416 aa22.18■■□□□ 1.14
RPL13A-202ENST00000467825 LRP6O75581 1613 aa22.17■■□□□ 1.14
RPL13A-202ENST00000467825 KNDC1Q76NI1 1749 aa22.17■■□□□ 1.14
RPL13A-202ENST00000467825 SHPRHQ149N8 1683 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms