RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-208ENST00000467308 ANKRD50Q9ULJ7 1429 aa24.38■■□□□ 1.49
TSSC4-208ENST00000467308 ZFYVE9O95405 1425 aa24.36■■□□□ 1.49
TSSC4-208ENST00000467308 RBM33Q96EV2 1170 aaKnown RBP24.36■■□□□ 1.49
TSSC4-208ENST00000467308 MSH6P52701 1360 aa24.36■■□□□ 1.49
TSSC4-208ENST00000467308 PLEKHG1Q9ULL1 1385 aa24.35■■□□□ 1.49
TSSC4-208ENST00000467308 MYO5BQ9ULV0 1848 aa24.35■■□□□ 1.49
TSSC4-208ENST00000467308 CHD2O14647 1828 aaKnown RBP24.34■■□□□ 1.49
TSSC4-208ENST00000467308 HDGFP51858 240 aaKnown RBP24.34■■□□□ 1.49
TSSC4-208ENST00000467308 BCANQ96GW7 911 aa24.34■■□□□ 1.49
TSSC4-208ENST00000467308 GCC2Q8IWJ2 1684 aa24.32■■□□□ 1.48
TSSC4-208ENST00000467308 FAM50AQ14320 339 aaKnown RBP24.32■■□□□ 1.48
TSSC4-208ENST00000467308 TMEM131LA2VDJ0 1609 aa24.32■■□□□ 1.48
TSSC4-208ENST00000467308 SLAIN2Q9P270 581 aa24.31■■□□□ 1.48
TSSC4-208ENST00000467308 RIMS2Q9UQ26 1411 aa24.3■■□□□ 1.48
TSSC4-208ENST00000467308 PPP1R15AO75807 674 aaPredicted RBP24.29■■□□□ 1.48
TSSC4-208ENST00000467308 POTEAQ6S8J7 498 aa24.29■■□□□ 1.48
TSSC4-208ENST00000467308 NCOA3Q9Y6Q9 1424 aa24.28■■□□□ 1.48
TSSC4-208ENST00000467308 PHLPP1O60346 1717 aa24.28■■□□□ 1.48
TSSC4-208ENST00000467308 UNC13BO14795 1591 aa24.28■■□□□ 1.48
TSSC4-208ENST00000467308 TBX22Q9Y458 520 aa24.27■■□□□ 1.48
TSSC4-208ENST00000467308 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.26■■□□□ 1.47
TSSC4-208ENST00000467308 JCADQ9P266 1359 aa24.25■■□□□ 1.47
TSSC4-208ENST00000467308 E9PCH4 1651 aa24.22■■□□□ 1.47
TSSC4-208ENST00000467308 DIP2AQ14689 1571 aa24.22■■□□□ 1.47
TSSC4-208ENST00000467308 COL16A1Q07092 1604 aaPredicted RBP24.21■■□□□ 1.47
TSSC4-208ENST00000467308 ADAMTS13Q76LX8 1427 aa24.2■■□□□ 1.46
TSSC4-208ENST00000467308 ROCK1Q13464 1354 aa24.2■■□□□ 1.46
TSSC4-208ENST00000467308 PIK3R4Q99570 1358 aa24.2■■□□□ 1.46
TSSC4-208ENST00000467308 IQGAP3Q86VI3 1631 aa24.19■■□□□ 1.46
TSSC4-208ENST00000467308 CHGAP10645 457 aaKnown RBP24.18■■□□□ 1.46
TSSC4-208ENST00000467308 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.16■■□□□ 1.46
TSSC4-208ENST00000467308 CADPS2Q86UW7 1296 aa24.16■■□□□ 1.46
TSSC4-208ENST00000467308 C19orf44Q9H6X5 657 aa24.16■■□□□ 1.46
TSSC4-208ENST00000467308 C14orf37Q86TY3 774 aa24.15■■□□□ 1.46
TSSC4-208ENST00000467308 SPATA31A6Q5VVP1 1343 aa24.14■■□□□ 1.46
TSSC4-208ENST00000467308 AHDC1Q5TGY3 1603 aaPredicted RBP24.13■■□□□ 1.45
TSSC4-208ENST00000467308 TRPM2O94759 1503 aa24.13■■□□□ 1.45
TSSC4-208ENST00000467308 ATF3P18847 181 aa24.12■■□□□ 1.45
TSSC4-208ENST00000467308 NUTM2DQ5VT03 806 aaPredicted RBP24.12■■□□□ 1.45
TSSC4-208ENST00000467308 SETD1AO15047 1707 aaKnown RBP24.1■■□□□ 1.45
TSSC4-208ENST00000467308 SHPRHQ149N8 1683 aa24.09■■□□□ 1.45
TSSC4-208ENST00000467308 NUP155O75694 1391 aa24.09■■□□□ 1.45
TSSC4-208ENST00000467308 LRP6O75581 1613 aa24.09■■□□□ 1.45
TSSC4-208ENST00000467308 AMOTL2Q9Y2J4 779 aa24.08■■□□□ 1.45
TSSC4-208ENST00000467308 DCCP43146 1447 aa24.07■■□□□ 1.44
TSSC4-208ENST00000467308 PTPRUQ92729 1446 aa24.06■■□□□ 1.44
TSSC4-208ENST00000467308 ZNF772Q68DY9 489 aaPredicted RBP24.05■■□□□ 1.44
TSSC4-208ENST00000467308 MEX3CQ5U5Q3 659 aaKnown RBP24.04■■□□□ 1.44
TSSC4-208ENST00000467308 SETBP1Q9Y6X0 1596 aa24.03■■□□□ 1.44
TSSC4-208ENST00000467308 NRXN3Q9Y4C0 1643 aa24.03■■□□□ 1.44
TSSC4-208ENST00000467308 BRINP3Q76B58 766 aa24.03■■□□□ 1.44
TSSC4-208ENST00000467308 XRN1Q8IZH2 1706 aaKnown RBP24.03■■□□□ 1.44
TSSC4-208ENST00000467308 SPHKAPQ2M3C7 1700 aa24.02■■□□□ 1.44
TSSC4-208ENST00000467308 ASXL1Q8IXJ9 1541 aa23.98■■□□□ 1.43
TSSC4-208ENST00000467308 SETD5Q9C0A6 1442 aa23.96■■□□□ 1.43
TSSC4-208ENST00000467308 ITGAEP38570 1179 aa23.96■■□□□ 1.43
TSSC4-208ENST00000467308 MST1RQ04912 1400 aa23.95■■□□□ 1.42
TSSC4-208ENST00000467308 NHSL1Q5SYE7 1610 aa23.95■■□□□ 1.42
TSSC4-208ENST00000467308 ZNF326Q5BKZ1 582 aaKnown RBP23.94■■□□□ 1.42
TSSC4-208ENST00000467308 METP08581 1390 aa23.93■■□□□ 1.42
TSSC4-208ENST00000467308 RXRBP28702 533 aa23.92■■□□□ 1.42
TSSC4-208ENST00000467308 UPF1Q92900 1129 aaKnown RBP eCLIP23.92■■□□□ 1.42
TSSC4-208ENST00000467308 CDK12Q9NYV4 1490 aaPredicted RBP23.92■■□□□ 1.42
TSSC4-208ENST00000467308 TRIM52Q96A61 297 aa23.91■■□□□ 1.42
TSSC4-208ENST00000467308 ADGRL3Q9HAR2 1447 aa23.91■■□□□ 1.42
TSSC4-208ENST00000467308 NUTM2BA6NNL0 878 aaPredicted RBP23.9■■□□□ 1.42
TSSC4-208ENST00000467308 NUTM2EB1AL46 878 aaPredicted RBP23.9■■□□□ 1.42
TSSC4-208ENST00000467308 NUTM2AQ8IVF1 878 aaPredicted RBP23.9■■□□□ 1.42
TSSC4-208ENST00000467308 LRRC59Q96AG4 307 aaKnown RBP23.9■■□□□ 1.42
TSSC4-208ENST00000467308 NEXMIFQ5QGS0 1516 aa23.89■■□□□ 1.42
TSSC4-208ENST00000467308 CLTCL1P53675 1640 aa23.88■■□□□ 1.41
TSSC4-208ENST00000467308 NALCNQ8IZF0 1738 aa23.87■■□□□ 1.41
TSSC4-208ENST00000467308 AFF2P51816 1311 aa23.86■■□□□ 1.41
TSSC4-208ENST00000467308 KIF1BO60333 1816 aa23.86■■□□□ 1.41
TSSC4-208ENST00000467308 PNPLA6Q8IY17 1366 aa23.83■■□□□ 1.41
TSSC4-208ENST00000467308 PTCH1Q13635 1447 aa23.81■■□□□ 1.4
TSSC4-208ENST00000467308 LAMC1P11047 1609 aa23.81■■□□□ 1.4
TSSC4-208ENST00000467308 DDX17Q92841 729 aaKnown RBP23.79■■□□□ 1.4
TSSC4-208ENST00000467308 C1orf167Q5SNV9 1468 aa23.79■■□□□ 1.4
TSSC4-208ENST00000467308 NAIPQ13075 1403 aa23.78■■□□□ 1.4
TSSC4-208ENST00000467308 VGFO15240 615 aaPredicted RBP23.78■■□□□ 1.4
TSSC4-208ENST00000467308 PPARGC1BQ86YN6 1023 aaKnown RBP23.78■■□□□ 1.4
TSSC4-208ENST00000467308 C8orf37Q96NL8 207 aa23.78■■□□□ 1.4
TSSC4-208ENST00000467308 PRAG1Q86YV5 1406 aa23.77■■□□□ 1.4
TSSC4-208ENST00000467308 RRBP1Q9P2E9 1410 aaKnown RBP23.76■■□□□ 1.39
TSSC4-208ENST00000467308 RBM6P78332 1123 aaKnown RBP23.76■■□□□ 1.39
TSSC4-208ENST00000467308 QTRT2Q9H974 415 aaKnown RBP23.76■■□□□ 1.39
TSSC4-208ENST00000467308 ROBO2Q9HCK4 1378 aa23.74■■□□□ 1.39
TSSC4-208ENST00000467308 RGS12O14924 1447 aa23.74■■□□□ 1.39
TSSC4-208ENST00000467308 SOS2Q07890 1332 aaPredicted RBP23.73■■□□□ 1.39
TSSC4-208ENST00000467308 RPGRIP1LQ68CZ1 1315 aa23.73■■□□□ 1.39
TSSC4-208ENST00000467308 NGLY1Q96IV0 654 aa23.71■■□□□ 1.39
TSSC4-208ENST00000467308 HFM1A2PYH4 1435 aa23.7■■□□□ 1.38
TSSC4-208ENST00000467308 ADAMTS2O95450 1211 aa23.69■■□□□ 1.38
TSSC4-208ENST00000467308 ORAI2Q96SN7 254 aa23.69■■□□□ 1.38
TSSC4-208ENST00000467308 PPLO60437 1756 aa23.69■■□□□ 1.38
TSSC4-208ENST00000467308 COL22A1Q8NFW1 1626 aaPredicted RBP23.66■■□□□ 1.38
TSSC4-208ENST00000467308 SLC4A1APQ9BWU0 796 aaKnown RBP23.64■■□□□ 1.37
TSSC4-208ENST00000467308 CDC42BPGQ6DT37 1551 aa23.63■■□□□ 1.37
TSSC4-208ENST00000467308 FNBP4Q8N3X1 1017 aaPredicted RBP23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms