RNA–Protein interactions for RNA: ENST00000466776.5

GTF3A-205, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-205ENST00000466776 UNC13BO14795 1591 aa18.43■□□□□ 0.54
GTF3A-205ENST00000466776 NKTRP30414 1462 aaKnown RBP18.41■□□□□ 0.54
GTF3A-205ENST00000466776 HDGFP51858 240 aaKnown RBP18.41■□□□□ 0.54
GTF3A-205ENST00000466776 BCANQ96GW7 911 aa18.41■□□□□ 0.54
GTF3A-205ENST00000466776 NWD1Q149M9 1564 aa18.41■□□□□ 0.54
GTF3A-205ENST00000466776 KCNA6P17658 529 aa18.4■□□□□ 0.54
GTF3A-205ENST00000466776 TMEM94Q12767 1356 aa18.39■□□□□ 0.53
GTF3A-205ENST00000466776 CHD2O14647 1828 aaKnown RBP18.38■□□□□ 0.53
GTF3A-205ENST00000466776 SLC26A8Q96RN1 970 aa18.38■□□□□ 0.53
GTF3A-205ENST00000466776 TMEM131LA2VDJ0 1609 aa18.38■□□□□ 0.53
GTF3A-205ENST00000466776 E9PCH4 1651 aa18.38■□□□□ 0.53
GTF3A-205ENST00000466776 PPP1R15AO75807 674 aaPredicted RBP18.37■□□□□ 0.53
GTF3A-205ENST00000466776 PROSER2Q86WR7 435 aaPredicted RBP18.37■□□□□ 0.53
GTF3A-205ENST00000466776 ROCK1Q13464 1354 aa18.37■□□□□ 0.53
GTF3A-205ENST00000466776 IQGAP3Q86VI3 1631 aa18.37■□□□□ 0.53
GTF3A-205ENST00000466776 FAM135BQ49AJ0 1406 aa18.36■□□□□ 0.53
GTF3A-205ENST00000466776 ROBO1Q9Y6N7 1651 aa18.36■□□□□ 0.53
GTF3A-205ENST00000466776 PLEKHG1Q9ULL1 1385 aa18.35■□□□□ 0.53
GTF3A-205ENST00000466776 ZFYVE9O95405 1425 aa18.34■□□□□ 0.53
GTF3A-205ENST00000466776 RIMS2Q9UQ26 1411 aa18.34■□□□□ 0.53
GTF3A-205ENST00000466776 MSH6P52701 1360 aa18.34■□□□□ 0.53
GTF3A-205ENST00000466776 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.33■□□□□ 0.52
GTF3A-205ENST00000466776 DIP2AQ14689 1571 aa18.31■□□□□ 0.52
GTF3A-205ENST00000466776 CHGAP10645 457 aaKnown RBP18.31■□□□□ 0.52
GTF3A-205ENST00000466776 PHLPP1O60346 1717 aa18.29■□□□□ 0.52
GTF3A-205ENST00000466776 SPHKAPQ2M3C7 1700 aa18.28■□□□□ 0.52
GTF3A-205ENST00000466776 NUP155O75694 1391 aa18.27■□□□□ 0.51
GTF3A-205ENST00000466776 NCOA3Q9Y6Q9 1424 aa18.26■□□□□ 0.51
GTF3A-205ENST00000466776 RBM33Q96EV2 1170 aaKnown RBP18.26■□□□□ 0.51
GTF3A-205ENST00000466776 TBX22Q9Y458 520 aa18.26■□□□□ 0.51
GTF3A-205ENST00000466776 ITGAEP38570 1179 aa18.25■□□□□ 0.51
GTF3A-205ENST00000466776 PIK3R4Q99570 1358 aa18.25■□□□□ 0.51
GTF3A-205ENST00000466776 TRPM2O94759 1503 aa18.24■□□□□ 0.51
GTF3A-205ENST00000466776 C14orf37Q86TY3 774 aa18.23■□□□□ 0.51
GTF3A-205ENST00000466776 SLAIN2Q9P270 581 aa18.22■□□□□ 0.51
GTF3A-205ENST00000466776 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.21■□□□□ 0.51
GTF3A-205ENST00000466776 ADAMTS13Q76LX8 1427 aa18.21■□□□□ 0.51
GTF3A-205ENST00000466776 KIF1BO60333 1816 aa18.19■□□□□ 0.5
GTF3A-205ENST00000466776 NUTM2DQ5VT03 806 aaPredicted RBP18.19■□□□□ 0.5
GTF3A-205ENST00000466776 JCADQ9P266 1359 aa18.18■□□□□ 0.5
GTF3A-205ENST00000466776 CADPS2Q86UW7 1296 aa18.18■□□□□ 0.5
GTF3A-205ENST00000466776 ATF3P18847 181 aa18.17■□□□□ 0.5
GTF3A-205ENST00000466776 COL16A1Q07092 1604 aaPredicted RBP18.16■□□□□ 0.5
GTF3A-205ENST00000466776 RGS17Q9UGC6 210 aaPredicted RBP18.16■□□□□ 0.5
GTF3A-205ENST00000466776 SETBP1Q9Y6X0 1596 aa18.16■□□□□ 0.5
GTF3A-205ENST00000466776 C19orf44Q9H6X5 657 aa18.15■□□□□ 0.5
GTF3A-205ENST00000466776 NRXN3Q9Y4C0 1643 aa18.14■□□□□ 0.49
GTF3A-205ENST00000466776 ZNF326Q5BKZ1 582 aaKnown RBP18.14■□□□□ 0.49
GTF3A-205ENST00000466776 PPARGC1BQ86YN6 1023 aaKnown RBP18.14■□□□□ 0.49
GTF3A-205ENST00000466776 XRN1Q8IZH2 1706 aaKnown RBP18.14■□□□□ 0.49
GTF3A-205ENST00000466776 AHDC1Q5TGY3 1603 aaPredicted RBP18.13■□□□□ 0.49
GTF3A-205ENST00000466776 AMOTL2Q9Y2J4 779 aa18.13■□□□□ 0.49
GTF3A-205ENST00000466776 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
GTF3A-205ENST00000466776 DCCP43146 1447 aa18.12■□□□□ 0.49
GTF3A-205ENST00000466776 RRBP1Q9P2E9 1410 aaKnown RBP18.11■□□□□ 0.49
GTF3A-205ENST00000466776 CLTCL1P53675 1640 aa18.11■□□□□ 0.49
GTF3A-205ENST00000466776 SPATA31A6Q5VVP1 1343 aa18.1■□□□□ 0.49
GTF3A-205ENST00000466776 PTPRUQ92729 1446 aa18.09■□□□□ 0.49
GTF3A-205ENST00000466776 SETD1AO15047 1707 aaKnown RBP18.08■□□□□ 0.48
GTF3A-205ENST00000466776 NEXMIFQ5QGS0 1516 aa18.08■□□□□ 0.48
GTF3A-205ENST00000466776 MEX3CQ5U5Q3 659 aaKnown RBP18.07■□□□□ 0.48
GTF3A-205ENST00000466776 POTEAQ6S8J7 498 aa18.07■□□□□ 0.48
GTF3A-205ENST00000466776 NAIPQ13075 1403 aa18.06■□□□□ 0.48
GTF3A-205ENST00000466776 NHSL1Q5SYE7 1610 aa18.05■□□□□ 0.48
GTF3A-205ENST00000466776 NALCNQ8IZF0 1738 aa18.03■□□□□ 0.48
GTF3A-205ENST00000466776 ASXL1Q8IXJ9 1541 aa18.03■□□□□ 0.48
GTF3A-205ENST00000466776 ZNF772Q68DY9 489 aaPredicted RBP18.02■□□□□ 0.48
GTF3A-205ENST00000466776 BRINP3Q76B58 766 aa18.02■□□□□ 0.48
GTF3A-205ENST00000466776 TRIM52Q96A61 297 aa18.02■□□□□ 0.48
GTF3A-205ENST00000466776 METP08581 1390 aa18.02■□□□□ 0.47
GTF3A-205ENST00000466776 LRP6O75581 1613 aa18.01■□□□□ 0.47
GTF3A-205ENST00000466776 HFM1A2PYH4 1435 aa18.01■□□□□ 0.47
GTF3A-205ENST00000466776 ADGRL3Q9HAR2 1447 aa18.01■□□□□ 0.47
GTF3A-205ENST00000466776 MST1RQ04912 1400 aa18■□□□□ 0.47
GTF3A-205ENST00000466776 PPLO60437 1756 aa18■□□□□ 0.47
GTF3A-205ENST00000466776 VGFO15240 615 aaPredicted RBP17.99■□□□□ 0.47
GTF3A-205ENST00000466776 SETD5Q9C0A6 1442 aa17.98■□□□□ 0.47
GTF3A-205ENST00000466776 SLC4A1APQ9BWU0 796 aaKnown RBP17.97■□□□□ 0.47
GTF3A-205ENST00000466776 PTCH1Q13635 1447 aa17.97■□□□□ 0.47
GTF3A-205ENST00000466776 RPGRIP1LQ68CZ1 1315 aa17.97■□□□□ 0.47
GTF3A-205ENST00000466776 LRRC59Q96AG4 307 aaKnown RBP17.95■□□□□ 0.46
GTF3A-205ENST00000466776 NUTM2BA6NNL0 878 aaPredicted RBP17.94■□□□□ 0.46
GTF3A-205ENST00000466776 NUTM2EB1AL46 878 aaPredicted RBP17.94■□□□□ 0.46
GTF3A-205ENST00000466776 NUTM2AQ8IVF1 878 aaPredicted RBP17.94■□□□□ 0.46
GTF3A-205ENST00000466776 LAMC1P11047 1609 aa17.91■□□□□ 0.46
GTF3A-205ENST00000466776 PRAG1Q86YV5 1406 aa17.91■□□□□ 0.46
GTF3A-205ENST00000466776 C1orf167Q5SNV9 1468 aa17.9■□□□□ 0.46
GTF3A-205ENST00000466776 RXRBP28702 533 aa17.9■□□□□ 0.46
GTF3A-205ENST00000466776 CCDC144AA2RUR9 1427 aa17.89■□□□□ 0.45
GTF3A-205ENST00000466776 CDK12Q9NYV4 1490 aaPredicted RBP17.88■□□□□ 0.45
GTF3A-205ENST00000466776 IFT172Q9UG01 1749 aa17.88■□□□□ 0.45
GTF3A-205ENST00000466776 AFF2P51816 1311 aa17.88■□□□□ 0.45
GTF3A-205ENST00000466776 PNPLA6Q8IY17 1366 aa17.88■□□□□ 0.45
GTF3A-205ENST00000466776 ROBO2Q9HCK4 1378 aa17.88■□□□□ 0.45
GTF3A-205ENST00000466776 CDC42BPGQ6DT37 1551 aa17.86■□□□□ 0.45
GTF3A-205ENST00000466776 ACIN1Q9UKV3 1341 aaKnown RBP17.85■□□□□ 0.45
GTF3A-205ENST00000466776 KNDC1Q76NI1 1749 aa17.84■□□□□ 0.45
GTF3A-205ENST00000466776 DDX17Q92841 729 aaKnown RBP17.84■□□□□ 0.45
GTF3A-205ENST00000466776 C8orf37Q96NL8 207 aa17.84■□□□□ 0.45
GTF3A-205ENST00000466776 ANKRD30BQ9BXX2 1392 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms