RNA–Protein interactions for RNA: ENST00000466707.1

ABCA2-213, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 2

Gene ABCA2, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-213ENST00000466707 IQGAP3Q86VI3 1631 aa39.15■■■■□ 3.86
ABCA2-213ENST00000466707 NWD1Q149M9 1564 aa39.13■■■■□ 3.85
ABCA2-213ENST00000466707 TMEM94Q12767 1356 aa39.1■■■■□ 3.85
ABCA2-213ENST00000466707 PPARGC1BQ86YN6 1023 aaKnown RBP39.1■■■■□ 3.85
ABCA2-213ENST00000466707 KCNA6P17658 529 aa39.09■■■■□ 3.85
ABCA2-213ENST00000466707 RIMS2Q9UQ26 1411 aa39.06■■■■□ 3.84
ABCA2-213ENST00000466707 NKTRP30414 1462 aaKnown RBP39.05■■■■□ 3.84
ABCA2-213ENST00000466707 ITGAEP38570 1179 aa39.04■■■■□ 3.84
ABCA2-213ENST00000466707 PLEKHG1Q9ULL1 1385 aa39.03■■■■□ 3.84
ABCA2-213ENST00000466707 RBM33Q96EV2 1170 aaKnown RBP39.02■■■■□ 3.84
ABCA2-213ENST00000466707 CHD2O14647 1828 aaKnown RBP39■■■■□ 3.83
ABCA2-213ENST00000466707 PROSER2Q86WR7 435 aaPredicted RBP38.99■■■■□ 3.83
ABCA2-213ENST00000466707 BCANQ96GW7 911 aa38.99■■■■□ 3.83
ABCA2-213ENST00000466707 NUP155O75694 1391 aa38.97■■■■□ 3.83
ABCA2-213ENST00000466707 ROBO1Q9Y6N7 1651 aa38.95■■■■□ 3.83
ABCA2-213ENST00000466707 PPP1R15AO75807 674 aaPredicted RBP38.95■■■■□ 3.83
ABCA2-213ENST00000466707 FAM135BQ49AJ0 1406 aa38.95■■■■□ 3.83
ABCA2-213ENST00000466707 CHGAP10645 457 aaKnown RBP38.94■■■■□ 3.82
ABCA2-213ENST00000466707 NUTM2DQ5VT03 806 aaPredicted RBP38.88■■■■□ 3.81
ABCA2-213ENST00000466707 PHF23Q9BUL5 403 aaPredicted RBP38.88■■■■□ 3.81
ABCA2-213ENST00000466707 ADAMTS13Q76LX8 1427 aa38.88■■■■□ 3.81
ABCA2-213ENST00000466707 SPHKAPQ2M3C7 1700 aa38.87■■■■□ 3.81
ABCA2-213ENST00000466707 HDGFP51858 240 aaKnown RBP38.86■■■■□ 3.81
ABCA2-213ENST00000466707 DIP2AQ14689 1571 aa38.84■■■■□ 3.81
ABCA2-213ENST00000466707 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.84■■■■□ 3.81
ABCA2-213ENST00000466707 MSH6P52701 1360 aa38.82■■■■□ 3.81
ABCA2-213ENST00000466707 TBX22Q9Y458 520 aa38.82■■■■□ 3.8
ABCA2-213ENST00000466707 RRBP1Q9P2E9 1410 aaKnown RBP38.8■■■■□ 3.8
ABCA2-213ENST00000466707 NRXN3Q9Y4C0 1643 aa38.74■■■■□ 3.79
ABCA2-213ENST00000466707 TRPM2O94759 1503 aa38.72■■■■□ 3.79
ABCA2-213ENST00000466707 PHLPP1O60346 1717 aa38.71■■■■□ 3.79
ABCA2-213ENST00000466707 CLTCL1P53675 1640 aa38.7■■■■□ 3.79
ABCA2-213ENST00000466707 PIK3R4Q99570 1358 aa38.7■■■■□ 3.78
ABCA2-213ENST00000466707 SLAIN2Q9P270 581 aa38.69■■■■□ 3.78
ABCA2-213ENST00000466707 RGS17Q9UGC6 210 aaPredicted RBP38.69■■■■□ 3.78
ABCA2-213ENST00000466707 NAIPQ13075 1403 aa38.69■■■■□ 3.78
ABCA2-213ENST00000466707 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.69■■■■□ 3.78
ABCA2-213ENST00000466707 PTPRUQ92729 1446 aa38.68■■■■□ 3.78
ABCA2-213ENST00000466707 NCOA3Q9Y6Q9 1424 aa38.67■■■■□ 3.78
ABCA2-213ENST00000466707 SETBP1Q9Y6X0 1596 aa38.65■■■■□ 3.78
ABCA2-213ENST00000466707 XRN1Q8IZH2 1706 aaKnown RBP38.63■■■■□ 3.77
ABCA2-213ENST00000466707 COL16A1Q07092 1604 aaPredicted RBP38.61■■■■□ 3.77
ABCA2-213ENST00000466707 C14orf37Q86TY3 774 aa38.59■■■■□ 3.77
ABCA2-213ENST00000466707 NEXMIFQ5QGS0 1516 aa38.58■■■■□ 3.77
ABCA2-213ENST00000466707 AMOTL2Q9Y2J4 779 aa38.58■■■■□ 3.77
ABCA2-213ENST00000466707 KIF1BO60333 1816 aa38.55■■■■□ 3.76
ABCA2-213ENST00000466707 ZNF326Q5BKZ1 582 aaKnown RBP38.55■■■■□ 3.76
ABCA2-213ENST00000466707 C19orf44Q9H6X5 657 aa38.52■■■■□ 3.76
ABCA2-213ENST00000466707 HFM1A2PYH4 1435 aa38.52■■■■□ 3.76
ABCA2-213ENST00000466707 METP08581 1390 aa38.5■■■■□ 3.75
ABCA2-213ENST00000466707 AHDC1Q5TGY3 1603 aaPredicted RBP38.49■■■■□ 3.75
ABCA2-213ENST00000466707 JCADQ9P266 1359 aa38.49■■■■□ 3.75
ABCA2-213ENST00000466707 CADPS2Q86UW7 1296 aa38.49■■■■□ 3.75
ABCA2-213ENST00000466707 ATF3P18847 181 aa38.46■■■■□ 3.75
ABCA2-213ENST00000466707 POTEAQ6S8J7 498 aa38.45■■■■□ 3.75
ABCA2-213ENST00000466707 DCCP43146 1447 aa38.43■■■■□ 3.74
ABCA2-213ENST00000466707 TRIM52Q96A61 297 aa38.41■■■■□ 3.74
ABCA2-213ENST00000466707 SETD1AO15047 1707 aaKnown RBP38.41■■■■□ 3.74
ABCA2-213ENST00000466707 LRP6O75581 1613 aa38.39■■■■□ 3.74
ABCA2-213ENST00000466707 SHPRHQ149N8 1683 aa38.39■■■■□ 3.74
ABCA2-213ENST00000466707 NALCNQ8IZF0 1738 aa38.38■■■■□ 3.74
ABCA2-213ENST00000466707 BRINP3Q76B58 766 aa38.36■■■■□ 3.73
ABCA2-213ENST00000466707 MST1RQ04912 1400 aa38.35■■■■□ 3.73
ABCA2-213ENST00000466707 ASXL1Q8IXJ9 1541 aa38.34■■■■□ 3.73
ABCA2-213ENST00000466707 ADGRL3Q9HAR2 1447 aa38.32■■■■□ 3.73
ABCA2-213ENST00000466707 PPLO60437 1756 aa38.31■■■■□ 3.72
ABCA2-213ENST00000466707 NHSL1Q5SYE7 1610 aa38.31■■■■□ 3.72
ABCA2-213ENST00000466707 SLC4A1APQ9BWU0 796 aaKnown RBP38.31■■■■□ 3.72
ABCA2-213ENST00000466707 SPATA31A6Q5VVP1 1343 aa38.28■■■■□ 3.72
ABCA2-213ENST00000466707 PTCH1Q13635 1447 aa38.22■■■■□ 3.71
ABCA2-213ENST00000466707 FOXD1Q16676 465 aa38.22■■■■□ 3.71
ABCA2-213ENST00000466707 VGFO15240 615 aaPredicted RBP38.21■■■■□ 3.71
ABCA2-213ENST00000466707 ROBO2Q9HCK4 1378 aa38.19■■■■□ 3.7
ABCA2-213ENST00000466707 RPGRIP1LQ68CZ1 1315 aa38.18■■■■□ 3.7
ABCA2-213ENST00000466707 SETD5Q9C0A6 1442 aa38.17■■■■□ 3.7
ABCA2-213ENST00000466707 PRAG1Q86YV5 1406 aa38.16■■■■□ 3.7
ABCA2-213ENST00000466707 MEX3CQ5U5Q3 659 aaKnown RBP38.15■■■■□ 3.7
ABCA2-213ENST00000466707 DDX17Q92841 729 aaKnown RBP38.14■■■■□ 3.7
ABCA2-213ENST00000466707 IFT172Q9UG01 1749 aa38.12■■■■□ 3.69
ABCA2-213ENST00000466707 C1orf167Q5SNV9 1468 aa38.11■■■■□ 3.69
ABCA2-213ENST00000466707 CCDC144AA2RUR9 1427 aa38.08■■■■□ 3.69
ABCA2-213ENST00000466707 NUTM2BA6NNL0 878 aaPredicted RBP38.08■■■■□ 3.69
ABCA2-213ENST00000466707 NUTM2EB1AL46 878 aaPredicted RBP38.08■■■■□ 3.69
ABCA2-213ENST00000466707 NUTM2AQ8IVF1 878 aaPredicted RBP38.08■■■■□ 3.69
ABCA2-213ENST00000466707 LAMC1P11047 1609 aa38.08■■■■□ 3.69
ABCA2-213ENST00000466707 SPATA31E1Q6ZUB1 1445 aa38.07■■■■□ 3.69
ABCA2-213ENST00000466707 ADGRF5Q8IZF2 1346 aa38.04■■■■□ 3.68
ABCA2-213ENST00000466707 PNPLA6Q8IY17 1366 aa38.03■■■■□ 3.68
ABCA2-213ENST00000466707 ZNF772Q68DY9 489 aaPredicted RBP38.02■■■■□ 3.68
ABCA2-213ENST00000466707 MPHOSPH9Q99550 1183 aa38.02■■■■□ 3.68
ABCA2-213ENST00000466707 LRRC59Q96AG4 307 aaKnown RBP38.01■■■■□ 3.68
ABCA2-213ENST00000466707 RGL3Q3MIN7 710 aa37.98■■■■□ 3.67
ABCA2-213ENST00000466707 ORAI2Q96SN7 254 aa37.97■■■■□ 3.67
ABCA2-213ENST00000466707 CDC42BPGQ6DT37 1551 aa37.96■■■■□ 3.67
ABCA2-213ENST00000466707 AFF2P51816 1311 aa37.93■■■■□ 3.66
ABCA2-213ENST00000466707 KNDC1Q76NI1 1749 aa37.92■■■■□ 3.66
ABCA2-213ENST00000466707 ANKRD30BQ9BXX2 1392 aa37.92■■■■□ 3.66
ABCA2-213ENST00000466707 TECPR2O15040 1411 aa37.9■■■■□ 3.66
ABCA2-213ENST00000466707 PIK3C2GO75747 1445 aa37.89■■■■□ 3.66
ABCA2-213ENST00000466707 SOS2Q07890 1332 aaPredicted RBP37.88■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms