RNA–Protein interactions for RNA: ENST00000466588.5

GAPDH-207, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,363 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-207ENST00000466588 ZFYVE9O95405 1425 aa16.89■□□□□ 0.29
GAPDH-207ENST00000466588 PROSER2Q86WR7 435 aaPredicted RBP16.89■□□□□ 0.29
GAPDH-207ENST00000466588 RBM33Q96EV2 1170 aaKnown RBP16.87■□□□□ 0.29
GAPDH-207ENST00000466588 ANKRD50Q9ULJ7 1429 aa16.87■□□□□ 0.29
GAPDH-207ENST00000466588 PLEKHG1Q9ULL1 1385 aa16.86■□□□□ 0.29
GAPDH-207ENST00000466588 MSH6P52701 1360 aa16.85■□□□□ 0.29
GAPDH-207ENST00000466588 GCC2Q8IWJ2 1684 aa16.83■□□□□ 0.29
GAPDH-207ENST00000466588 RIMS2Q9UQ26 1411 aa16.83■□□□□ 0.29
GAPDH-207ENST00000466588 POTEAQ6S8J7 498 aa16.83■□□□□ 0.28
GAPDH-207ENST00000466588 TMEM131LA2VDJ0 1609 aa16.83■□□□□ 0.28
GAPDH-207ENST00000466588 UNC13BO14795 1591 aa16.82■□□□□ 0.28
GAPDH-207ENST00000466588 CHD2O14647 1828 aaKnown RBP16.8■□□□□ 0.28
GAPDH-207ENST00000466588 BCANQ96GW7 911 aa16.8■□□□□ 0.28
GAPDH-207ENST00000466588 SLAIN2Q9P270 581 aa16.8■□□□□ 0.28
GAPDH-207ENST00000466588 PHLPP1O60346 1717 aa16.8■□□□□ 0.28
GAPDH-207ENST00000466588 FAM50AQ14320 339 aaKnown RBP16.79■□□□□ 0.28
GAPDH-207ENST00000466588 JCADQ9P266 1359 aa16.79■□□□□ 0.28
GAPDH-207ENST00000466588 COL16A1Q07092 1604 aaPredicted RBP16.79■□□□□ 0.28
GAPDH-207ENST00000466588 MYO5BQ9ULV0 1848 aa16.79■□□□□ 0.28
GAPDH-207ENST00000466588 NCOA3Q9Y6Q9 1424 aa16.78■□□□□ 0.28
GAPDH-207ENST00000466588 PPP1R15AO75807 674 aaPredicted RBP16.78■□□□□ 0.28
GAPDH-207ENST00000466588 DIP2AQ14689 1571 aa16.78■□□□□ 0.28
GAPDH-207ENST00000466588 ADAMTS13Q76LX8 1427 aa16.78■□□□□ 0.28
GAPDH-207ENST00000466588 TRIM26Q12899 539 aaPredicted RBP16.77■□□□□ 0.28
GAPDH-207ENST00000466588 HDGFP51858 240 aaKnown RBP16.77■□□□□ 0.27
GAPDH-207ENST00000466588 TBX22Q9Y458 520 aa16.77■□□□□ 0.27
GAPDH-207ENST00000466588 E9PCH4 1651 aa16.76■□□□□ 0.27
GAPDH-207ENST00000466588 IQGAP3Q86VI3 1631 aa16.75■□□□□ 0.27
GAPDH-207ENST00000466588 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.75■□□□□ 0.27
GAPDH-207ENST00000466588 PIK3R4Q99570 1358 aa16.74■□□□□ 0.27
GAPDH-207ENST00000466588 AHDC1Q5TGY3 1603 aaPredicted RBP16.73■□□□□ 0.27
GAPDH-207ENST00000466588 ROCK1Q13464 1354 aa16.73■□□□□ 0.27
GAPDH-207ENST00000466588 LRP6O75581 1613 aa16.73■□□□□ 0.27
GAPDH-207ENST00000466588 SETD1AO15047 1707 aaKnown RBP16.72■□□□□ 0.27
GAPDH-207ENST00000466588 CHGAP10645 457 aaKnown RBP16.71■□□□□ 0.27
GAPDH-207ENST00000466588 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.71■□□□□ 0.27
GAPDH-207ENST00000466588 TRPM2O94759 1503 aa16.71■□□□□ 0.27
GAPDH-207ENST00000466588 SPATA31A6Q5VVP1 1343 aa16.7■□□□□ 0.26
GAPDH-207ENST00000466588 C14orf37Q86TY3 774 aa16.69■□□□□ 0.26
GAPDH-207ENST00000466588 CADPS2Q86UW7 1296 aa16.69■□□□□ 0.26
GAPDH-207ENST00000466588 SHPRHQ149N8 1683 aa16.69■□□□□ 0.26
GAPDH-207ENST00000466588 NUTM2DQ5VT03 806 aaPredicted RBP16.68■□□□□ 0.26
GAPDH-207ENST00000466588 C19orf44Q9H6X5 657 aa16.68■□□□□ 0.26
GAPDH-207ENST00000466588 PTPRUQ92729 1446 aa16.68■□□□□ 0.26
GAPDH-207ENST00000466588 DCCP43146 1447 aa16.67■□□□□ 0.26
GAPDH-207ENST00000466588 ATF3P18847 181 aa16.66■□□□□ 0.26
GAPDH-207ENST00000466588 XRN1Q8IZH2 1706 aaKnown RBP16.66■□□□□ 0.26
GAPDH-207ENST00000466588 SETBP1Q9Y6X0 1596 aa16.66■□□□□ 0.26
GAPDH-207ENST00000466588 NUP155O75694 1391 aa16.66■□□□□ 0.26
GAPDH-207ENST00000466588 NRXN3Q9Y4C0 1643 aa16.65■□□□□ 0.26
GAPDH-207ENST00000466588 RRBP1Q9P2E9 1410 aaKnown RBP16.65■□□□□ 0.26
GAPDH-207ENST00000466588 PCGF6Q9BYE7 350 aa16.64■□□□□ 0.26
GAPDH-207ENST00000466588 AMOTL2Q9Y2J4 779 aa16.64■□□□□ 0.26
GAPDH-207ENST00000466588 BRINP3Q76B58 766 aa16.64■□□□□ 0.25
GAPDH-207ENST00000466588 ASXL1Q8IXJ9 1541 aa16.63■□□□□ 0.25
GAPDH-207ENST00000466588 ZNF772Q68DY9 489 aaPredicted RBP16.63■□□□□ 0.25
GAPDH-207ENST00000466588 MEX3CQ5U5Q3 659 aaKnown RBP16.62■□□□□ 0.25
GAPDH-207ENST00000466588 MST1RQ04912 1400 aa16.61■□□□□ 0.25
GAPDH-207ENST00000466588 SPHKAPQ2M3C7 1700 aa16.61■□□□□ 0.25
GAPDH-207ENST00000466588 NHSL1Q5SYE7 1610 aa16.6■□□□□ 0.25
GAPDH-207ENST00000466588 SETD5Q9C0A6 1442 aa16.59■□□□□ 0.25
GAPDH-207ENST00000466588 METP08581 1390 aa16.58■□□□□ 0.24
GAPDH-207ENST00000466588 CDK12Q9NYV4 1490 aaPredicted RBP16.58■□□□□ 0.24
GAPDH-207ENST00000466588 ADGRL3Q9HAR2 1447 aa16.57■□□□□ 0.24
GAPDH-207ENST00000466588 UPF1Q92900 1129 aaKnown RBP eCLIP16.56■□□□□ 0.24
GAPDH-207ENST00000466588 TRIM52Q96A61 297 aa16.56■□□□□ 0.24
GAPDH-207ENST00000466588 NEXMIFQ5QGS0 1516 aa16.56■□□□□ 0.24
GAPDH-207ENST00000466588 ITGAEP38570 1179 aa16.55■□□□□ 0.24
GAPDH-207ENST00000466588 CLTCL1P53675 1640 aa16.54■□□□□ 0.24
GAPDH-207ENST00000466588 NALCNQ8IZF0 1738 aa16.54■□□□□ 0.24
GAPDH-207ENST00000466588 NUTM2BA6NNL0 878 aaPredicted RBP16.53■□□□□ 0.24
GAPDH-207ENST00000466588 NUTM2EB1AL46 878 aaPredicted RBP16.53■□□□□ 0.24
GAPDH-207ENST00000466588 RXRBP28702 533 aa16.53■□□□□ 0.24
GAPDH-207ENST00000466588 ZNF326Q5BKZ1 582 aaKnown RBP16.53■□□□□ 0.24
GAPDH-207ENST00000466588 NUTM2AQ8IVF1 878 aaPredicted RBP16.53■□□□□ 0.24
GAPDH-207ENST00000466588 AFF2P51816 1311 aa16.53■□□□□ 0.24
GAPDH-207ENST00000466588 PNPLA6Q8IY17 1366 aa16.52■□□□□ 0.23
GAPDH-207ENST00000466588 LRRC59Q96AG4 307 aaKnown RBP16.51■□□□□ 0.23
GAPDH-207ENST00000466588 PTCH1Q13635 1447 aa16.5■□□□□ 0.23
GAPDH-207ENST00000466588 LAMC1P11047 1609 aa16.49■□□□□ 0.23
GAPDH-207ENST00000466588 RGS12O14924 1447 aa16.49■□□□□ 0.23
GAPDH-207ENST00000466588 C1orf167Q5SNV9 1468 aa16.48■□□□□ 0.23
GAPDH-207ENST00000466588 DDX17Q92841 729 aaKnown RBP16.48■□□□□ 0.23
GAPDH-207ENST00000466588 PRAG1Q86YV5 1406 aa16.48■□□□□ 0.23
GAPDH-207ENST00000466588 NAIPQ13075 1403 aa16.46■□□□□ 0.23
GAPDH-207ENST00000466588 C8orf37Q96NL8 207 aa16.46■□□□□ 0.23
GAPDH-207ENST00000466588 KIF1BO60333 1816 aa16.44■□□□□ 0.22
GAPDH-207ENST00000466588 ROBO2Q9HCK4 1378 aa16.44■□□□□ 0.22
GAPDH-207ENST00000466588 RBM6P78332 1123 aaKnown RBP16.43■□□□□ 0.22
GAPDH-207ENST00000466588 QTRT2Q9H974 415 aaKnown RBP16.42■□□□□ 0.22
GAPDH-207ENST00000466588 SRCAPQ6ZRS2 3230 aa16.42■□□□□ 0.22
GAPDH-207ENST00000466588 SOS2Q07890 1332 aaPredicted RBP16.42■□□□□ 0.22
GAPDH-207ENST00000466588 VGFO15240 615 aaPredicted RBP16.4■□□□□ 0.22
GAPDH-207ENST00000466588 HFM1A2PYH4 1435 aa16.4■□□□□ 0.22
GAPDH-207ENST00000466588 ORAI2Q96SN7 254 aa16.39■□□□□ 0.21
GAPDH-207ENST00000466588 COL22A1Q8NFW1 1626 aaPredicted RBP16.39■□□□□ 0.21
GAPDH-207ENST00000466588 ADAMTS2O95450 1211 aa16.38■□□□□ 0.21
GAPDH-207ENST00000466588 RPGRIP1LQ68CZ1 1315 aa16.38■□□□□ 0.21
GAPDH-207ENST00000466588 CDC42BPGQ6DT37 1551 aa16.38■□□□□ 0.21
GAPDH-207ENST00000466588 NGLY1Q96IV0 654 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms