RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 ZFYVE9O95405 1425 aa29.13■■■□□ 2.25
SRSF4-202ENST00000466448 NKTRP30414 1462 aaKnown RBP29.13■■■□□ 2.25
SRSF4-202ENST00000466448 BCANQ96GW7 911 aa29.13■■■□□ 2.25
SRSF4-202ENST00000466448 PLEKHG1Q9ULL1 1385 aa29.09■■■□□ 2.25
SRSF4-202ENST00000466448 UNC13BO14795 1591 aa29.09■■■□□ 2.25
SRSF4-202ENST00000466448 RIMS2Q9UQ26 1411 aa29.08■■■□□ 2.25
SRSF4-202ENST00000466448 RGS17Q9UGC6 210 aaPredicted RBP29.07■■■□□ 2.24
SRSF4-202ENST00000466448 ROBO1Q9Y6N7 1651 aa29.06■■■□□ 2.24
SRSF4-202ENST00000466448 TMEM131LA2VDJ0 1609 aa29.06■■■□□ 2.24
SRSF4-202ENST00000466448 GCC2Q8IWJ2 1684 aa29.05■■■□□ 2.24
SRSF4-202ENST00000466448 PPP1R15AO75807 674 aaPredicted RBP29.05■■■□□ 2.24
SRSF4-202ENST00000466448 MSH6P52701 1360 aa29.03■■■□□ 2.24
SRSF4-202ENST00000466448 ROCK1Q13464 1354 aa29.03■■■□□ 2.24
SRSF4-202ENST00000466448 HDGFP51858 240 aaKnown RBP29.02■■■□□ 2.24
SRSF4-202ENST00000466448 MYO5BQ9ULV0 1848 aa29.01■■■□□ 2.23
SRSF4-202ENST00000466448 E9PCH4 1651 aa28.99■■■□□ 2.23
SRSF4-202ENST00000466448 CHGAP10645 457 aaKnown RBP28.99■■■□□ 2.23
SRSF4-202ENST00000466448 SLAIN2Q9P270 581 aa28.98■■■□□ 2.23
SRSF4-202ENST00000466448 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.97■■■□□ 2.23
SRSF4-202ENST00000466448 TBX22Q9Y458 520 aa28.97■■■□□ 2.23
SRSF4-202ENST00000466448 IQGAP3Q86VI3 1631 aa28.97■■■□□ 2.23
SRSF4-202ENST00000466448 CHD2O14647 1828 aaKnown RBP28.95■■■□□ 2.23
SRSF4-202ENST00000466448 NUTM2DQ5VT03 806 aaPredicted RBP28.95■■■□□ 2.22
SRSF4-202ENST00000466448 ADAMTS13Q76LX8 1427 aa28.94■■■□□ 2.22
SRSF4-202ENST00000466448 NUP155O75694 1391 aa28.93■■■□□ 2.22
SRSF4-202ENST00000466448 ITGAEP38570 1179 aa28.91■■■□□ 2.22
SRSF4-202ENST00000466448 NCOA3Q9Y6Q9 1424 aa28.9■■■□□ 2.22
SRSF4-202ENST00000466448 DIP2AQ14689 1571 aa28.88■■■□□ 2.21
SRSF4-202ENST00000466448 POTEAQ6S8J7 498 aa28.88■■■□□ 2.21
SRSF4-202ENST00000466448 PHLPP1O60346 1717 aa28.86■■■□□ 2.21
SRSF4-202ENST00000466448 C14orf37Q86TY3 774 aa28.86■■■□□ 2.21
SRSF4-202ENST00000466448 PIK3R4Q99570 1358 aa28.86■■■□□ 2.21
SRSF4-202ENST00000466448 JCADQ9P266 1359 aa28.85■■■□□ 2.21
SRSF4-202ENST00000466448 PPARGC1BQ86YN6 1023 aaKnown RBP28.83■■■□□ 2.21
SRSF4-202ENST00000466448 COL16A1Q07092 1604 aaPredicted RBP28.81■■■□□ 2.2
SRSF4-202ENST00000466448 TRPM2O94759 1503 aa28.81■■■□□ 2.2
SRSF4-202ENST00000466448 C19orf44Q9H6X5 657 aa28.8■■■□□ 2.2
SRSF4-202ENST00000466448 PTPRUQ92729 1446 aa28.79■■■□□ 2.2
SRSF4-202ENST00000466448 CADPS2Q86UW7 1296 aa28.79■■■□□ 2.2
SRSF4-202ENST00000466448 AMOTL2Q9Y2J4 779 aa28.79■■■□□ 2.2
SRSF4-202ENST00000466448 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.77■■■□□ 2.2
SRSF4-202ENST00000466448 ATF3P18847 181 aa28.77■■■□□ 2.2
SRSF4-202ENST00000466448 NRXN3Q9Y4C0 1643 aa28.73■■■□□ 2.19
SRSF4-202ENST00000466448 AHDC1Q5TGY3 1603 aaPredicted RBP28.72■■■□□ 2.19
SRSF4-202ENST00000466448 SETBP1Q9Y6X0 1596 aa28.72■■■□□ 2.19
SRSF4-202ENST00000466448 LRP6O75581 1613 aa28.72■■■□□ 2.19
SRSF4-202ENST00000466448 SPHKAPQ2M3C7 1700 aa28.72■■■□□ 2.19
SRSF4-202ENST00000466448 SPATA31A6Q5VVP1 1343 aa28.7■■■□□ 2.19
SRSF4-202ENST00000466448 ZNF326Q5BKZ1 582 aaKnown RBP28.69■■■□□ 2.18
SRSF4-202ENST00000466448 XRN1Q8IZH2 1706 aaKnown RBP28.69■■■□□ 2.18
SRSF4-202ENST00000466448 BRINP3Q76B58 766 aa28.68■■■□□ 2.18
SRSF4-202ENST00000466448 DCCP43146 1447 aa28.68■■■□□ 2.18
SRSF4-202ENST00000466448 METP08581 1390 aa28.67■■■□□ 2.18
SRSF4-202ENST00000466448 CLTCL1P53675 1640 aa28.63■■■□□ 2.17
SRSF4-202ENST00000466448 SHPRHQ149N8 1683 aa28.62■■■□□ 2.17
SRSF4-202ENST00000466448 MEX3CQ5U5Q3 659 aaKnown RBP28.62■■■□□ 2.17
SRSF4-202ENST00000466448 RRBP1Q9P2E9 1410 aaKnown RBP28.61■■■□□ 2.17
SRSF4-202ENST00000466448 NEXMIFQ5QGS0 1516 aa28.61■■■□□ 2.17
SRSF4-202ENST00000466448 ASXL1Q8IXJ9 1541 aa28.61■■■□□ 2.17
SRSF4-202ENST00000466448 MST1RQ04912 1400 aa28.6■■■□□ 2.17
SRSF4-202ENST00000466448 NAIPQ13075 1403 aa28.6■■■□□ 2.17
SRSF4-202ENST00000466448 SETD1AO15047 1707 aaKnown RBP28.6■■■□□ 2.17
SRSF4-202ENST00000466448 ZNF772Q68DY9 489 aaPredicted RBP28.57■■■□□ 2.16
SRSF4-202ENST00000466448 ADGRL3Q9HAR2 1447 aa28.56■■■□□ 2.16
SRSF4-202ENST00000466448 SETD5Q9C0A6 1442 aa28.53■■■□□ 2.16
SRSF4-202ENST00000466448 NUTM2BA6NNL0 878 aaPredicted RBP28.53■■■□□ 2.16
SRSF4-202ENST00000466448 NUTM2EB1AL46 878 aaPredicted RBP28.53■■■□□ 2.16
SRSF4-202ENST00000466448 NUTM2AQ8IVF1 878 aaPredicted RBP28.53■■■□□ 2.16
SRSF4-202ENST00000466448 NHSL1Q5SYE7 1610 aa28.51■■■□□ 2.15
SRSF4-202ENST00000466448 NALCNQ8IZF0 1738 aa28.49■■■□□ 2.15
SRSF4-202ENST00000466448 DDX17Q92841 729 aaKnown RBP28.48■■■□□ 2.15
SRSF4-202ENST00000466448 TRIM52Q96A61 297 aa28.48■■■□□ 2.15
SRSF4-202ENST00000466448 HFM1A2PYH4 1435 aa28.47■■■□□ 2.15
SRSF4-202ENST00000466448 LRRC59Q96AG4 307 aaKnown RBP28.47■■■□□ 2.15
SRSF4-202ENST00000466448 KIF1BO60333 1816 aa28.46■■■□□ 2.15
SRSF4-202ENST00000466448 PTCH1Q13635 1447 aa28.45■■■□□ 2.15
SRSF4-202ENST00000466448 VGFO15240 615 aaPredicted RBP28.45■■■□□ 2.14
SRSF4-202ENST00000466448 ROBO2Q9HCK4 1378 aa28.43■■■□□ 2.14
SRSF4-202ENST00000466448 RXRBP28702 533 aa28.43■■■□□ 2.14
SRSF4-202ENST00000466448 AFF2P51816 1311 aa28.43■■■□□ 2.14
SRSF4-202ENST00000466448 C1orf167Q5SNV9 1468 aa28.42■■■□□ 2.14
SRSF4-202ENST00000466448 PNPLA6Q8IY17 1366 aa28.42■■■□□ 2.14
SRSF4-202ENST00000466448 SLC4A1APQ9BWU0 796 aaKnown RBP28.41■■■□□ 2.14
SRSF4-202ENST00000466448 RPGRIP1LQ68CZ1 1315 aa28.4■■■□□ 2.14
SRSF4-202ENST00000466448 PRAG1Q86YV5 1406 aa28.39■■■□□ 2.14
SRSF4-202ENST00000466448 UPF1Q92900 1129 aaKnown RBP eCLIP28.39■■■□□ 2.14
SRSF4-202ENST00000466448 CDK12Q9NYV4 1490 aaPredicted RBP28.37■■■□□ 2.13
SRSF4-202ENST00000466448 C8orf37Q96NL8 207 aa28.36■■■□□ 2.13
SRSF4-202ENST00000466448 ORAI2Q96SN7 254 aa28.35■■■□□ 2.13
SRSF4-202ENST00000466448 LAMC1P11047 1609 aa28.33■■■□□ 2.13
SRSF4-202ENST00000466448 FOXD1Q16676 465 aa28.31■■■□□ 2.12
SRSF4-202ENST00000466448 SOS2Q07890 1332 aaPredicted RBP28.31■■■□□ 2.12
SRSF4-202ENST00000466448 PPLO60437 1756 aa28.31■■■□□ 2.12
SRSF4-202ENST00000466448 ADAMTS2O95450 1211 aa28.28■■■□□ 2.12
SRSF4-202ENST00000466448 QTRT2Q9H974 415 aaKnown RBP28.28■■■□□ 2.12
SRSF4-202ENST00000466448 RGS12O14924 1447 aa28.26■■■□□ 2.12
SRSF4-202ENST00000466448 RBM6P78332 1123 aaKnown RBP28.25■■■□□ 2.11
SRSF4-202ENST00000466448 NGLY1Q96IV0 654 aa28.25■■■□□ 2.11
SRSF4-202ENST00000466448 ADGRF5Q8IZF2 1346 aa28.24■■■□□ 2.11
SRSF4-202ENST00000466448 CCDC144AA2RUR9 1427 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms