RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 KCNC4Q03721 635 aa14.32□□□□□ -0.12
SSB-207ENST00000465871 METTL3Q86U44 580 aaKnown RBP14.31□□□□□ -0.12
SSB-207ENST00000465871 APLP1P51693 650 aa14.3□□□□□ -0.12
SSB-207ENST00000465871 TJAP1Q5JTD0 557 aa14.26□□□□□ -0.13
SSB-207ENST00000465871 MTRQ99707 1265 aa14.26□□□□□ -0.13
SSB-207ENST00000465871 PRR14Q9BWN1 585 aa14.25□□□□□ -0.13
SSB-207ENST00000465871 IL21Q9HBE4 155 aa14.23□□□□□ -0.13
SSB-207ENST00000465871 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.2□□□□□ -0.14
SSB-207ENST00000465871 RGS20O76081 388 aa14.19□□□□□ -0.14
SSB-207ENST00000465871 MAP2K5Q13163 448 aa14.19□□□□□ -0.14
SSB-207ENST00000465871 CFHP08603 1231 aa14.18□□□□□ -0.14
SSB-207ENST00000465871 SLC10A3P09131 477 aa14.17□□□□□ -0.14
SSB-207ENST00000465871 KMT5BQ4FZB7 885 aa14.17□□□□□ -0.14
SSB-207ENST00000465871 LMOD2Q6P5Q4 547 aa14.16□□□□□ -0.14
SSB-207ENST00000465871 PCDHB3Q9Y5E6 796 aa14.16□□□□□ -0.14
SSB-207ENST00000465871 COPS2P61201 443 aa14.15□□□□□ -0.14
SSB-207ENST00000465871 ZNF516Q92618 1163 aa14.15□□□□□ -0.14
SSB-207ENST00000465871 PHOX2BQ99453 314 aa14.15□□□□□ -0.14
SSB-207ENST00000465871 DAXXQ9UER7 740 aaPredicted RBP14.15□□□□□ -0.14
SSB-207ENST00000465871 ACTN4O43707 911 aaKnown RBP14.14□□□□□ -0.15
SSB-207ENST00000465871 NLRP7Q8WX94 980 aa14.14□□□□□ -0.15
SSB-207ENST00000465871 RSPH4AQ5TD94 716 aa14.12□□□□□ -0.15
SSB-207ENST00000465871 MINK1Q8N4C8 1332 aaPredicted RBP14.11□□□□□ -0.15
SSB-207ENST00000465871 IRF6O14896 467 aa14.1□□□□□ -0.15
SSB-207ENST00000465871 BLOC1S3Q6QNY0 202 aa14.1□□□□□ -0.15
SSB-207ENST00000465871 ZPR1O75312 459 aa14.09□□□□□ -0.15
SSB-207ENST00000465871 RDH13Q8NBN7 331 aa14.08□□□□□ -0.16
SSB-207ENST00000465871 DDX11L8A8MPP1 907 aa14.07□□□□□ -0.16
SSB-207ENST00000465871 SULF1Q8IWU6 871 aa14.07□□□□□ -0.16
SSB-207ENST00000465871 CCDC102AQ96A19 550 aa14.06□□□□□ -0.16
SSB-207ENST00000465871 NKX2-3Q8TAU0 364 aa14.05□□□□□ -0.16
SSB-207ENST00000465871 PPP1R18Q6NYC8 613 aa14.03□□□□□ -0.16
SSB-207ENST00000465871 TLL1O43897 1013 aa14□□□□□ -0.17
SSB-207ENST00000465871 NR1I2O75469 434 aa14□□□□□ -0.17
SSB-207ENST00000465871 ZC3H15Q8WU90 426 aaKnown RBP13.99□□□□□ -0.17
SSB-207ENST00000465871 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.99□□□□□ -0.17
SSB-207ENST00000465871 GGCXP38435 758 aa13.98□□□□□ -0.17
SSB-207ENST00000465871 GCGRP47871 477 aa13.98□□□□□ -0.17
SSB-207ENST00000465871 MDM2Q00987 491 aaPredicted RBP13.98□□□□□ -0.17
SSB-207ENST00000465871 ZMYND10O75800 440 aa13.97□□□□□ -0.17
SSB-207ENST00000465871 BARGINQ6ZT62 677 aa13.97□□□□□ -0.17
SSB-207ENST00000465871 FUT2Q10981 343 aa13.96□□□□□ -0.17
SSB-207ENST00000465871 PUS10Q3MIT2 529 aaKnown RBP13.96□□□□□ -0.17
SSB-207ENST00000465871 CD46P15529 392 aa13.94□□□□□ -0.18
SSB-207ENST00000465871 KRI1Q8N9T8 703 aaKnown RBP13.94□□□□□ -0.18
SSB-207ENST00000465871 TMUB1Q9BVT8 246 aa13.94□□□□□ -0.18
SSB-207ENST00000465871 ADH1BP00325 375 aa13.93□□□□□ -0.18
SSB-207ENST00000465871 ATP6V1AP38606 617 aa13.93□□□□□ -0.18
SSB-207ENST00000465871 SCUBE3Q8IX30 993 aa13.93□□□□□ -0.18
SSB-207ENST00000465871 GPCPD1Q9NPB8 672 aa13.93□□□□□ -0.18
SSB-207ENST00000465871 CLCN1P35523 988 aa13.92□□□□□ -0.18
SSB-207ENST00000465871 MORN1Q5T089 497 aa13.92□□□□□ -0.18
SSB-207ENST00000465871 SLC24A1O60721 1099 aa13.91□□□□□ -0.18
SSB-207ENST00000465871 IRX2Q9BZI1 471 aaPredicted RBP13.9□□□□□ -0.18
SSB-207ENST00000465871 PRKD2Q9BZL6 878 aa13.89□□□□□ -0.19
SSB-207ENST00000465871 S1PR4O95977 384 aa13.88□□□□□ -0.19
SSB-207ENST00000465871 RNF223E7ERA6 249 aa13.87□□□□□ -0.19
SSB-207ENST00000465871 FAM217BQ9NTX9 383 aaPredicted RBP13.87□□□□□ -0.19
SSB-207ENST00000465871 V9GY48 417 aaPredicted RBP13.87□□□□□ -0.19
SSB-207ENST00000465871 GRIPAP1Q4V328 841 aa13.86□□□□□ -0.19
SSB-207ENST00000465871 SPSB2Q99619 263 aa13.86□□□□□ -0.19
SSB-207ENST00000465871 SLC27A5Q9Y2P5 690 aa13.86□□□□□ -0.19
SSB-207ENST00000465871 SLC6A16Q9GZN6 736 aa13.85□□□□□ -0.19
SSB-207ENST00000465871 KDM4AO75164 1064 aa13.84□□□□□ -0.19
SSB-207ENST00000465871 AMHR2Q16671 573 aa13.83□□□□□ -0.2
SSB-207ENST00000465871 ANKLE1Q8NAG6 615 aa13.83□□□□□ -0.2
SSB-207ENST00000465871 THAP11Q96EK4 314 aa13.83□□□□□ -0.2
SSB-207ENST00000465871 REPIN1Q9BWE0 567 aaKnown RBP13.82□□□□□ -0.2
SSB-207ENST00000465871 SALL2Q9Y467 1007 aaPredicted RBP13.82□□□□□ -0.2
SSB-207ENST00000465871 FMNL1O95466 1100 aaPredicted RBP13.81□□□□□ -0.2
SSB-207ENST00000465871 USP46P62068 366 aa13.8□□□□□ -0.2
SSB-207ENST00000465871 TTLL12Q14166 644 aaPredicted RBP13.8□□□□□ -0.2
SSB-207ENST00000465871 PPEF1O14829 653 aaPredicted RBP13.79□□□□□ -0.2
SSB-207ENST00000465871 BRICD5Q6PL45 260 aa13.78□□□□□ -0.2
SSB-207ENST00000465871 RNF19BQ6ZMZ0 732 aa13.77□□□□□ -0.21
SSB-207ENST00000465871 HOXA2O43364 376 aa13.76□□□□□ -0.21
SSB-207ENST00000465871 Q3C1V9 767 aa13.76□□□□□ -0.21
SSB-207ENST00000465871 BCANQ96GW7 911 aa13.76□□□□□ -0.21
SSB-207ENST00000465871 SSTR3P32745 418 aaPredicted RBP13.75□□□□□ -0.21
SSB-207ENST00000465871 GIGYF2Q6Y7W6 1299 aaKnown RBP13.75□□□□□ -0.21
SSB-207ENST00000465871 EMID1Q96A84 441 aaPredicted RBP13.75□□□□□ -0.21
SSB-207ENST00000465871 AK7Q96M32 723 aa13.75□□□□□ -0.21
SSB-207ENST00000465871 TRIM66O15016 1216 aa13.74□□□□□ -0.21
SSB-207ENST00000465871 FAM160A2Q8N612 972 aaPredicted RBP13.74□□□□□ -0.21
SSB-207ENST00000465871 SLC19A1P41440 591 aa13.73□□□□□ -0.21
SSB-207ENST00000465871 MSS51Q4VC12 460 aa13.73□□□□□ -0.21
SSB-207ENST00000465871 HLA-CQ95604 372 aa13.73□□□□□ -0.21
SSB-207ENST00000465871 LAPTM4AQ15012 233 aa13.72□□□□□ -0.21
SSB-207ENST00000465871 NUTM1Q86Y26 1132 aa13.72□□□□□ -0.21
SSB-207ENST00000465871 PARP9Q8IXQ6 854 aa13.71□□□□□ -0.21
SSB-207ENST00000465871 PRDM9Q9NQV7 894 aa13.71□□□□□ -0.21
SSB-207ENST00000465871 PLA2G2CQ5R387 149 aa13.7□□□□□ -0.22
SSB-207ENST00000465871 GFRA3O60609 400 aa13.68□□□□□ -0.22
SSB-207ENST00000465871 GUCA2AQ02747 115 aa13.68□□□□□ -0.22
SSB-207ENST00000465871 SPRYD7Q5W111 196 aa13.68□□□□□ -0.22
SSB-207ENST00000465871 LIAT1Q6ZQX7 453 aa13.68□□□□□ -0.22
SSB-207ENST00000465871 FCF1Q9Y324 198 aaKnown RBP13.68□□□□□ -0.22
SSB-207ENST00000465871 USB1Q9BQ65 265 aaKnown RBP13.67□□□□□ -0.22
SSB-207ENST00000465871 SLC24A3Q9HC58 644 aa13.66□□□□□ -0.22
SSB-207ENST00000465871 NRG2O14511 850 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms