RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 TMEM131LA2VDJ0 1609 aa18.52■□□□□ 0.56
CNOT4-208ENST00000465721 RPRD2Q5VT52 1461 aaKnown RBP18.52■□□□□ 0.56
CNOT4-208ENST00000465721 ZFYVE9O95405 1425 aa18.51■□□□□ 0.55
CNOT4-208ENST00000465721 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
CNOT4-208ENST00000465721 UNC13BO14795 1591 aa18.5■□□□□ 0.55
CNOT4-208ENST00000465721 COL16A1Q07092 1604 aaPredicted RBP18.49■□□□□ 0.55
CNOT4-208ENST00000465721 CHIC2Q9UKJ5 165 aa18.49■□□□□ 0.55
CNOT4-208ENST00000465721 E9PCH4 1651 aa18.47■□□□□ 0.55
CNOT4-208ENST00000465721 PROSER2Q86WR7 435 aaPredicted RBP18.47■□□□□ 0.55
CNOT4-208ENST00000465721 RBM33Q96EV2 1170 aaKnown RBP18.47■□□□□ 0.55
CNOT4-208ENST00000465721 PLEKHG1Q9ULL1 1385 aa18.46■□□□□ 0.55
CNOT4-208ENST00000465721 POTEAQ6S8J7 498 aa18.46■□□□□ 0.55
CNOT4-208ENST00000465721 MSH6P52701 1360 aa18.45■□□□□ 0.54
CNOT4-208ENST00000465721 SLC52A1Q9NWF4 448 aa18.45■□□□□ 0.54
CNOT4-208ENST00000465721 ANKRD50Q9ULJ7 1429 aa18.45■□□□□ 0.54
CNOT4-208ENST00000465721 RIMS2Q9UQ26 1411 aa18.44■□□□□ 0.54
CNOT4-208ENST00000465721 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.43■□□□□ 0.54
CNOT4-208ENST00000465721 DIP2AQ14689 1571 aa18.43■□□□□ 0.54
CNOT4-208ENST00000465721 ADRA2BP18089 450 aa18.43■□□□□ 0.54
CNOT4-208ENST00000465721 APLP2Q06481 763 aa18.43■□□□□ 0.54
CNOT4-208ENST00000465721 SHPRHQ149N8 1683 aa18.42■□□□□ 0.54
CNOT4-208ENST00000465721 IQGAP3Q86VI3 1631 aa18.41■□□□□ 0.54
CNOT4-208ENST00000465721 AHDC1Q5TGY3 1603 aaPredicted RBP18.4■□□□□ 0.54
CNOT4-208ENST00000465721 JCADQ9P266 1359 aa18.4■□□□□ 0.54
CNOT4-208ENST00000465721 ADAMTS13Q76LX8 1427 aa18.39■□□□□ 0.53
CNOT4-208ENST00000465721 LRP6O75581 1613 aa18.38■□□□□ 0.53
CNOT4-208ENST00000465721 SLAIN2Q9P270 581 aa18.38■□□□□ 0.53
CNOT4-208ENST00000465721 NCOA3Q9Y6Q9 1424 aa18.38■□□□□ 0.53
CNOT4-208ENST00000465721 BCANQ96GW7 911 aa18.36■□□□□ 0.53
CNOT4-208ENST00000465721 NRXN3Q9Y4C0 1643 aa18.36■□□□□ 0.53
CNOT4-208ENST00000465721 XRN1Q8IZH2 1706 aaKnown RBP18.35■□□□□ 0.53
CNOT4-208ENST00000465721 TRPM2O94759 1503 aa18.34■□□□□ 0.53
CNOT4-208ENST00000465721 PPP1R15AO75807 674 aaPredicted RBP18.34■□□□□ 0.53
CNOT4-208ENST00000465721 SPHKAPQ2M3C7 1700 aa18.33■□□□□ 0.52
CNOT4-208ENST00000465721 FAM50AQ14320 339 aaKnown RBP18.33■□□□□ 0.52
CNOT4-208ENST00000465721 TBX22Q9Y458 520 aa18.33■□□□□ 0.52
CNOT4-208ENST00000465721 PIK3R4Q99570 1358 aa18.31■□□□□ 0.52
CNOT4-208ENST00000465721 NHSL1Q5SYE7 1610 aa18.31■□□□□ 0.52
CNOT4-208ENST00000465721 HDGFP51858 240 aaKnown RBP18.29■□□□□ 0.52
CNOT4-208ENST00000465721 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.29■□□□□ 0.52
CNOT4-208ENST00000465721 PTPRUQ92729 1446 aa18.29■□□□□ 0.52
CNOT4-208ENST00000465721 SETBP1Q9Y6X0 1596 aa18.29■□□□□ 0.52
CNOT4-208ENST00000465721 ROCK1Q13464 1354 aa18.29■□□□□ 0.52
CNOT4-208ENST00000465721 SPATA31A6Q5VVP1 1343 aa18.28■□□□□ 0.52
CNOT4-208ENST00000465721 DCCP43146 1447 aa18.26■□□□□ 0.51
CNOT4-208ENST00000465721 NUTM2DQ5VT03 806 aaPredicted RBP18.26■□□□□ 0.51
CNOT4-208ENST00000465721 ASXL1Q8IXJ9 1541 aa18.26■□□□□ 0.51
CNOT4-208ENST00000465721 NALCNQ8IZF0 1738 aa18.26■□□□□ 0.51
CNOT4-208ENST00000465721 CHGAP10645 457 aaKnown RBP18.25■□□□□ 0.51
CNOT4-208ENST00000465721 CADPS2Q86UW7 1296 aa18.25■□□□□ 0.51
CNOT4-208ENST00000465721 C19orf44Q9H6X5 657 aa18.25■□□□□ 0.51
CNOT4-208ENST00000465721 C14orf37Q86TY3 774 aa18.24■□□□□ 0.51
CNOT4-208ENST00000465721 ATF3P18847 181 aa18.22■□□□□ 0.51
CNOT4-208ENST00000465721 BRINP3Q76B58 766 aa18.21■□□□□ 0.51
CNOT4-208ENST00000465721 MST1RQ04912 1400 aa18.21■□□□□ 0.51
CNOT4-208ENST00000465721 CLTCL1P53675 1640 aa18.2■□□□□ 0.5
CNOT4-208ENST00000465721 MEX3CQ5U5Q3 659 aaKnown RBP18.2■□□□□ 0.5
CNOT4-208ENST00000465721 AMOTL2Q9Y2J4 779 aa18.2■□□□□ 0.5
CNOT4-208ENST00000465721 CDK12Q9NYV4 1490 aaPredicted RBP18.2■□□□□ 0.5
CNOT4-208ENST00000465721 NUP155O75694 1391 aa18.19■□□□□ 0.5
CNOT4-208ENST00000465721 NEXMIFQ5QGS0 1516 aa18.19■□□□□ 0.5
CNOT4-208ENST00000465721 KIF1BO60333 1816 aa18.19■□□□□ 0.5
CNOT4-208ENST00000465721 ZNF772Q68DY9 489 aaPredicted RBP18.19■□□□□ 0.5
CNOT4-208ENST00000465721 SETD5Q9C0A6 1442 aa18.19■□□□□ 0.5
CNOT4-208ENST00000465721 LAMC1P11047 1609 aa18.18■□□□□ 0.5
CNOT4-208ENST00000465721 UPF1Q92900 1129 aaKnown RBP eCLIP18.16■□□□□ 0.5
CNOT4-208ENST00000465721 TRIM52Q96A61 297 aa18.16■□□□□ 0.5
CNOT4-208ENST00000465721 ADGRL3Q9HAR2 1447 aa18.15■□□□□ 0.5
CNOT4-208ENST00000465721 METP08581 1390 aa18.15■□□□□ 0.5
CNOT4-208ENST00000465721 SRCAPQ6ZRS2 3230 aa18.11■□□□□ 0.49
CNOT4-208ENST00000465721 RGS12O14924 1447 aa18.1■□□□□ 0.49
CNOT4-208ENST00000465721 PNPLA6Q8IY17 1366 aa18.1■□□□□ 0.49
CNOT4-208ENST00000465721 AFF2P51816 1311 aa18.1■□□□□ 0.49
CNOT4-208ENST00000465721 NUTM2BA6NNL0 878 aaPredicted RBP18.1■□□□□ 0.49
CNOT4-208ENST00000465721 NUTM2EB1AL46 878 aaPredicted RBP18.1■□□□□ 0.49
CNOT4-208ENST00000465721 RXRBP28702 533 aa18.1■□□□□ 0.49
CNOT4-208ENST00000465721 NUTM2AQ8IVF1 878 aaPredicted RBP18.1■□□□□ 0.49
CNOT4-208ENST00000465721 PIAS4Q8N2W9 510 aaPredicted RBP18.1■□□□□ 0.49
CNOT4-208ENST00000465721 PTCH1Q13635 1447 aa18.08■□□□□ 0.49
CNOT4-208ENST00000465721 PPLO60437 1756 aa18.08■□□□□ 0.48
CNOT4-208ENST00000465721 EP400Q96L91 3159 aa18.08■□□□□ 0.48
CNOT4-208ENST00000465721 PRAG1Q86YV5 1406 aa18.06■□□□□ 0.48
CNOT4-208ENST00000465721 ITGAEP38570 1179 aa18.06■□□□□ 0.48
CNOT4-208ENST00000465721 ZNF326Q5BKZ1 582 aaKnown RBP18.06■□□□□ 0.48
CNOT4-208ENST00000465721 DDX17Q92841 729 aaKnown RBP18.06■□□□□ 0.48
CNOT4-208ENST00000465721 C1orf167Q5SNV9 1468 aa18.06■□□□□ 0.48
CNOT4-208ENST00000465721 COL22A1Q8NFW1 1626 aaPredicted RBP18.05■□□□□ 0.48
CNOT4-208ENST00000465721 LRRC59Q96AG4 307 aaKnown RBP18.05■□□□□ 0.48
CNOT4-208ENST00000465721 MARF1Q9Y4F3 1742 aaKnown RBP18.05■□□□□ 0.48
CNOT4-208ENST00000465721 C8orf37Q96NL8 207 aa18.02■□□□□ 0.48
CNOT4-208ENST00000465721 ROBO2Q9HCK4 1378 aa18.01■□□□□ 0.47
CNOT4-208ENST00000465721 NAIPQ13075 1403 aa18■□□□□ 0.47
CNOT4-208ENST00000465721 CDC42BPGQ6DT37 1551 aa18■□□□□ 0.47
CNOT4-208ENST00000465721 RBM6P78332 1123 aaKnown RBP17.99■□□□□ 0.47
CNOT4-208ENST00000465721 IFT172Q9UG01 1749 aa17.98■□□□□ 0.47
CNOT4-208ENST00000465721 RRBP1Q9P2E9 1410 aaKnown RBP17.98■□□□□ 0.47
CNOT4-208ENST00000465721 SOS2Q07890 1332 aaPredicted RBP17.98■□□□□ 0.47
CNOT4-208ENST00000465721 QTRT2Q9H974 415 aaKnown RBP17.97■□□□□ 0.47
CNOT4-208ENST00000465721 MYOM2P54296 1465 aa17.95■□□□□ 0.46
CNOT4-208ENST00000465721 HFM1A2PYH4 1435 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms