RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 IDI1Q13907 227 aa31.31■■■□□ 2.6
CD58-204ENST00000464088 NWD1Q149M9 1564 aa31.3■■■□□ 2.6
CD58-204ENST00000464088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.3■■■□□ 2.6
CD58-204ENST00000464088 KANK1Q14678 1352 aa31.3■■■□□ 2.6
CD58-204ENST00000464088 NKTRP30414 1462 aaKnown RBP31.29■■■□□ 2.6
CD58-204ENST00000464088 PROSER2Q86WR7 435 aaPredicted RBP31.29■■■□□ 2.6
CD58-204ENST00000464088 SLC26A8Q96RN1 970 aa31.26■■■□□ 2.59
CD58-204ENST00000464088 NOS1P29475 1434 aa31.24■■■□□ 2.59
CD58-204ENST00000464088 IQGAP3Q86VI3 1631 aa31.23■■■□□ 2.59
CD58-204ENST00000464088 ADGRB3O60242 1522 aa31.23■■■□□ 2.59
CD58-204ENST00000464088 PHLPP1O60346 1717 aa31.21■■■□□ 2.59
CD58-204ENST00000464088 RBM33Q96EV2 1170 aaKnown RBP31.21■■■□□ 2.59
CD58-204ENST00000464088 MSH6P52701 1360 aa31.19■■■□□ 2.58
CD58-204ENST00000464088 SETD5Q9C0A6 1442 aa31.19■■■□□ 2.58
CD58-204ENST00000464088 SLAIN2Q9P270 581 aa31.18■■■□□ 2.58
CD58-204ENST00000464088 SETD1AO15047 1707 aaKnown RBP31.18■■■□□ 2.58
CD58-204ENST00000464088 NUP155O75694 1391 aa31.17■■■□□ 2.58
CD58-204ENST00000464088 CHD2O14647 1828 aaKnown RBP31.17■■■□□ 2.58
CD58-204ENST00000464088 JCADQ9P266 1359 aa31.17■■■□□ 2.58
CD58-204ENST00000464088 SLC52A1Q9NWF4 448 aa31.16■■■□□ 2.58
CD58-204ENST00000464088 COL16A1Q07092 1604 aaPredicted RBP31.12■■■□□ 2.57
CD58-204ENST00000464088 ZFYVE9O95405 1425 aa31.1■■■□□ 2.57
CD58-204ENST00000464088 RAB3GAP2Q9H2M9 1393 aa31.09■■■□□ 2.57
CD58-204ENST00000464088 PLEKHG1Q9ULL1 1385 aa31.09■■■□□ 2.57
CD58-204ENST00000464088 TRIM26Q12899 539 aaPredicted RBP31.09■■■□□ 2.57
CD58-204ENST00000464088 RPRD2Q5VT52 1461 aaKnown RBP31.08■■■□□ 2.57
CD58-204ENST00000464088 MYO5BQ9ULV0 1848 aa31.08■■■□□ 2.57
CD58-204ENST00000464088 E9PCH4 1651 aa31.08■■■□□ 2.57
CD58-204ENST00000464088 NCOA3Q9Y6Q9 1424 aa31.07■■■□□ 2.57
CD58-204ENST00000464088 BCANQ96GW7 911 aa31.05■■■□□ 2.56
CD58-204ENST00000464088 TRIM52Q96A61 297 aa31.04■■■□□ 2.56
CD58-204ENST00000464088 SPATA31A6Q5VVP1 1343 aa31.02■■■□□ 2.56
CD58-204ENST00000464088 TMEM131LA2VDJ0 1609 aa31.02■■■□□ 2.56
CD58-204ENST00000464088 LRP6O75581 1613 aa31.02■■■□□ 2.56
CD58-204ENST00000464088 ACIN1Q9UKV3 1341 aaKnown RBP31.01■■■□□ 2.56
CD58-204ENST00000464088 RIMS2Q9UQ26 1411 aa31■■■□□ 2.55
CD58-204ENST00000464088 HRCP23327 699 aa31■■■□□ 2.55
CD58-204ENST00000464088 HDGFP51858 240 aaKnown RBP31■■■□□ 2.55
CD58-204ENST00000464088 TBX22Q9Y458 520 aa31■■■□□ 2.55
CD58-204ENST00000464088 AHDC1Q5TGY3 1603 aaPredicted RBP30.98■■■□□ 2.55
CD58-204ENST00000464088 SHPRHQ149N8 1683 aa30.97■■■□□ 2.55
CD58-204ENST00000464088 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.95■■■□□ 2.55
CD58-204ENST00000464088 ZNF772Q68DY9 489 aaPredicted RBP30.95■■■□□ 2.55
CD58-204ENST00000464088 PPP1R15AO75807 674 aaPredicted RBP30.94■■■□□ 2.54
CD58-204ENST00000464088 UPF1Q92900 1129 aaKnown RBP eCLIP30.94■■■□□ 2.54
CD58-204ENST00000464088 DIP2AQ14689 1571 aa30.92■■■□□ 2.54
CD58-204ENST00000464088 SLC4A1APQ9BWU0 796 aaKnown RBP30.92■■■□□ 2.54
CD58-204ENST00000464088 ADAMTS13Q76LX8 1427 aa30.91■■■□□ 2.54
CD58-204ENST00000464088 CADPS2Q86UW7 1296 aa30.91■■■□□ 2.54
CD58-204ENST00000464088 PIK3R4Q99570 1358 aa30.91■■■□□ 2.54
CD58-204ENST00000464088 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.9■■■□□ 2.54
CD58-204ENST00000464088 MPHOSPH9Q99550 1183 aa30.9■■■□□ 2.54
CD58-204ENST00000464088 C19orf44Q9H6X5 657 aa30.9■■■□□ 2.54
CD58-204ENST00000464088 SPHKAPQ2M3C7 1700 aa30.9■■■□□ 2.54
CD58-204ENST00000464088 MEX3CQ5U5Q3 659 aaKnown RBP30.89■■■□□ 2.54
CD58-204ENST00000464088 C14orf37Q86TY3 774 aa30.86■■■□□ 2.53
CD58-204ENST00000464088 ATF3P18847 181 aa30.85■■■□□ 2.53
CD58-204ENST00000464088 CDK12Q9NYV4 1490 aaPredicted RBP30.83■■■□□ 2.53
CD58-204ENST00000464088 TRPM2O94759 1503 aa30.81■■■□□ 2.52
CD58-204ENST00000464088 RXRBP28702 533 aa30.8■■■□□ 2.52
CD58-204ENST00000464088 BRINP3Q76B58 766 aa30.79■■■□□ 2.52
CD58-204ENST00000464088 FOXD1Q16676 465 aa30.78■■■□□ 2.52
CD58-204ENST00000464088 DCCP43146 1447 aa30.78■■■□□ 2.52
CD58-204ENST00000464088 CHGAP10645 457 aaKnown RBP30.76■■■□□ 2.51
CD58-204ENST00000464088 NUTM2DQ5VT03 806 aaPredicted RBP30.76■■■□□ 2.51
CD58-204ENST00000464088 PTPRUQ92729 1446 aa30.75■■■□□ 2.51
CD58-204ENST00000464088 CLTCL1P53675 1640 aa30.75■■■□□ 2.51
CD58-204ENST00000464088 AMOTL2Q9Y2J4 779 aa30.74■■■□□ 2.51
CD58-204ENST00000464088 NHSL1Q5SYE7 1610 aa30.72■■■□□ 2.51
CD58-204ENST00000464088 ASXL1Q8IXJ9 1541 aa30.72■■■□□ 2.51
CD58-204ENST00000464088 XRN1Q8IZH2 1706 aaKnown RBP30.7■■■□□ 2.51
CD58-204ENST00000464088 NUTM2BA6NNL0 878 aaPredicted RBP30.69■■■□□ 2.5
CD58-204ENST00000464088 NUTM2EB1AL46 878 aaPredicted RBP30.69■■■□□ 2.5
CD58-204ENST00000464088 NUTM2AQ8IVF1 878 aaPredicted RBP30.69■■■□□ 2.5
CD58-204ENST00000464088 AFF2P51816 1311 aa30.69■■■□□ 2.5
CD58-204ENST00000464088 MST1RQ04912 1400 aa30.67■■■□□ 2.5
CD58-204ENST00000464088 NRXN3Q9Y4C0 1643 aa30.67■■■□□ 2.5
CD58-204ENST00000464088 PCGF6Q9BYE7 350 aa30.67■■■□□ 2.5
CD58-204ENST00000464088 SETBP1Q9Y6X0 1596 aa30.64■■■□□ 2.5
CD58-204ENST00000464088 KIF1BO60333 1816 aa30.63■■■□□ 2.49
CD58-204ENST00000464088 LRRC59Q96AG4 307 aaKnown RBP30.63■■■□□ 2.49
CD58-204ENST00000464088 ANKRD30BQ9BXX2 1392 aa30.63■■■□□ 2.49
CD58-204ENST00000464088 CCDC144AA2RUR9 1427 aa30.6■■■□□ 2.49
CD58-204ENST00000464088 RGS12O14924 1447 aa30.59■■■□□ 2.49
CD58-204ENST00000464088 RBM6P78332 1123 aaKnown RBP30.57■■■□□ 2.48
CD58-204ENST00000464088 PNPLA6Q8IY17 1366 aa30.56■■■□□ 2.48
CD58-204ENST00000464088 QTRT2Q9H974 415 aaKnown RBP30.56■■■□□ 2.48
CD58-204ENST00000464088 DHX57Q6P158 1386 aaKnown RBP30.55■■■□□ 2.48
CD58-204ENST00000464088 ADGRL3Q9HAR2 1447 aa30.54■■■□□ 2.48
CD58-204ENST00000464088 C8orf37Q96NL8 207 aa30.53■■■□□ 2.48
CD58-204ENST00000464088 METP08581 1390 aa30.53■■■□□ 2.48
CD58-204ENST00000464088 NALCNQ8IZF0 1738 aa30.51■■■□□ 2.47
CD58-204ENST00000464088 SPATA31E1Q6ZUB1 1445 aa30.51■■■□□ 2.47
CD58-204ENST00000464088 LAMC1P11047 1609 aa30.51■■■□□ 2.47
CD58-204ENST00000464088 DDX17Q92841 729 aaKnown RBP30.48■■■□□ 2.47
CD58-204ENST00000464088 NEXMIFQ5QGS0 1516 aa30.47■■■□□ 2.47
CD58-204ENST00000464088 SRCAPQ6ZRS2 3230 aa30.47■■■□□ 2.47
CD58-204ENST00000464088 NGLY1Q96IV0 654 aa30.44■■■□□ 2.46
CD58-204ENST00000464088 ZNF326Q5BKZ1 582 aaKnown RBP30.43■■■□□ 2.46
CD58-204ENST00000464088 C1orf167Q5SNV9 1468 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms