RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 DNAJB2P25686 324 aa7.42□□□□□ -1.22
SCFD1-204ENST00000463622 ITGBL1O95965 494 aaPredicted RBP7.42□□□□□ -1.22
SCFD1-204ENST00000463622 PXYLP1Q8TE99 480 aa7.42□□□□□ -1.22
SCFD1-204ENST00000463622 KCNC4Q03721 635 aa7.41□□□□□ -1.22
SCFD1-204ENST00000463622 SLF2Q8IX21 1173 aa7.41□□□□□ -1.22
SCFD1-204ENST00000463622 TMEM134Q9H6X4 195 aa7.41□□□□□ -1.22
SCFD1-204ENST00000463622 CC2D2AQ9P2K1 1620 aa7.41□□□□□ -1.22
SCFD1-204ENST00000463622 TJAP1Q5JTD0 557 aa7.4□□□□□ -1.23
SCFD1-204ENST00000463622 METTL3Q86U44 580 aaKnown RBP7.4□□□□□ -1.23
SCFD1-204ENST00000463622 ZNF516Q92618 1163 aa7.4□□□□□ -1.23
SCFD1-204ENST00000463622 MTRQ99707 1265 aa7.4□□□□□ -1.23
SCFD1-204ENST00000463622 OATP04181 439 aa7.39□□□□□ -1.23
SCFD1-204ENST00000463622 IFFO2Q5TF58 517 aa7.39□□□□□ -1.23
SCFD1-204ENST00000463622 A0A0G2JS52 829 aa7.39□□□□□ -1.23
SCFD1-204ENST00000463622 COPS2P61201 443 aa7.39□□□□□ -1.23
SCFD1-204ENST00000463622 PHOX2BQ99453 314 aa7.39□□□□□ -1.23
SCFD1-204ENST00000463622 TULP1O00294 542 aaPredicted RBP7.37□□□□□ -1.23
SCFD1-204ENST00000463622 SLC10A3P09131 477 aa7.37□□□□□ -1.23
SCFD1-204ENST00000463622 SLC4A3P48751 1232 aa7.37□□□□□ -1.23
SCFD1-204ENST00000463622 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.37□□□□□ -1.23
SCFD1-204ENST00000463622 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.37□□□□□ -1.23
SCFD1-204ENST00000463622 NKX2-3Q8TAU0 364 aa7.36□□□□□ -1.23
SCFD1-204ENST00000463622 IL21Q9HBE4 155 aa7.35□□□□□ -1.23
SCFD1-204ENST00000463622 EIF4G1Q04637 1599 aaKnown RBP7.35□□□□□ -1.23
SCFD1-204ENST00000463622 CFHP08603 1231 aa7.34□□□□□ -1.23
SCFD1-204ENST00000463622 LMOD2Q6P5Q4 547 aa7.33□□□□□ -1.24
SCFD1-204ENST00000463622 BLOC1S3Q6QNY0 202 aa7.33□□□□□ -1.24
SCFD1-204ENST00000463622 PCDHB3Q9Y5E6 796 aa7.33□□□□□ -1.24
SCFD1-204ENST00000463622 NECTIN2Q92692 538 aa7.33□□□□□ -1.24
SCFD1-204ENST00000463622 DDX11L8A8MPP1 907 aa7.32□□□□□ -1.24
SCFD1-204ENST00000463622 DCAF1Q9Y4B6 1507 aa7.32□□□□□ -1.24
SCFD1-204ENST00000463622 RDH13Q8NBN7 331 aa7.31□□□□□ -1.24
SCFD1-204ENST00000463622 DAXXQ9UER7 740 aaPredicted RBP7.31□□□□□ -1.24
SCFD1-204ENST00000463622 IRF6O14896 467 aa7.31□□□□□ -1.24
SCFD1-204ENST00000463622 MAP2K5Q13163 448 aa7.31□□□□□ -1.24
SCFD1-204ENST00000463622 PUS10Q3MIT2 529 aaKnown RBP7.31□□□□□ -1.24
SCFD1-204ENST00000463622 ACTN4O43707 911 aaKnown RBP7.3□□□□□ -1.24
SCFD1-204ENST00000463622 KMT5BQ4FZB7 885 aa7.3□□□□□ -1.24
SCFD1-204ENST00000463622 PPP1R18Q6NYC8 613 aa7.3□□□□□ -1.24
SCFD1-204ENST00000463622 TLL1O43897 1013 aa7.29□□□□□ -1.24
SCFD1-204ENST00000463622 ZPR1O75312 459 aa7.29□□□□□ -1.24
SCFD1-204ENST00000463622 PRR14Q9BWN1 585 aa7.29□□□□□ -1.24
SCFD1-204ENST00000463622 CCDC102AQ96A19 550 aa7.28□□□□□ -1.24
SCFD1-204ENST00000463622 MDM2Q00987 491 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-204ENST00000463622 MINK1Q8N4C8 1332 aaPredicted RBP7.27□□□□□ -1.25
SCFD1-204ENST00000463622 ZCCHC6Q5VYS8 1495 aaKnown RBP7.27□□□□□ -1.25
SCFD1-204ENST00000463622 RSPH4AQ5TD94 716 aa7.26□□□□□ -1.25
SCFD1-204ENST00000463622 KRI1Q8N9T8 703 aaKnown RBP7.26□□□□□ -1.25
SCFD1-204ENST00000463622 ZC3H15Q8WU90 426 aaKnown RBP7.26□□□□□ -1.25
SCFD1-204ENST00000463622 FUT2Q10981 343 aa7.25□□□□□ -1.25
SCFD1-204ENST00000463622 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.25□□□□□ -1.25
SCFD1-204ENST00000463622 SCRIBQ14160 1630 aa7.25□□□□□ -1.25
SCFD1-204ENST00000463622 RGS20O76081 388 aa7.25□□□□□ -1.25
SCFD1-204ENST00000463622 SCUBE3Q8IX30 993 aa7.25□□□□□ -1.25
SCFD1-204ENST00000463622 PPEF1O14829 653 aaPredicted RBP7.23□□□□□ -1.25
SCFD1-204ENST00000463622 GCGRP47871 477 aa7.23□□□□□ -1.25
SCFD1-204ENST00000463622 SULF1Q8IWU6 871 aa7.23□□□□□ -1.25
SCFD1-204ENST00000463622 ZMYND10O75800 440 aa7.23□□□□□ -1.25
SCFD1-204ENST00000463622 BARGINQ6ZT62 677 aa7.23□□□□□ -1.25
SCFD1-204ENST00000463622 PRKD2Q9BZL6 878 aa7.23□□□□□ -1.25
SCFD1-204ENST00000463622 CUX2O14529 1486 aa7.22□□□□□ -1.25
SCFD1-204ENST00000463622 NR1I2O75469 434 aa7.22□□□□□ -1.25
SCFD1-204ENST00000463622 REPIN1Q9BWE0 567 aaKnown RBP7.22□□□□□ -1.25
SCFD1-204ENST00000463622 S1PR4O95977 384 aa7.21□□□□□ -1.25
SCFD1-204ENST00000463622 RNF223E7ERA6 249 aa7.21□□□□□ -1.26
SCFD1-204ENST00000463622 CD46P15529 392 aa7.21□□□□□ -1.26
SCFD1-204ENST00000463622 MORN1Q5T089 497 aa7.21□□□□□ -1.26
SCFD1-204ENST00000463622 IRX2Q9BZI1 471 aaPredicted RBP7.21□□□□□ -1.26
SCFD1-204ENST00000463622 SLC27A5Q9Y2P5 690 aa7.21□□□□□ -1.26
SCFD1-204ENST00000463622 ATP6V1AP38606 617 aa7.2□□□□□ -1.26
SCFD1-204ENST00000463622 GGCXP38435 758 aa7.19□□□□□ -1.26
SCFD1-204ENST00000463622 SLC24A1O60721 1099 aa7.19□□□□□ -1.26
SCFD1-204ENST00000463622 ADH1BP00325 375 aa7.19□□□□□ -1.26
SCFD1-204ENST00000463622 HLA-CQ95604 372 aa7.19□□□□□ -1.26
SCFD1-204ENST00000463622 SPSB2Q99619 263 aa7.19□□□□□ -1.26
SCFD1-204ENST00000463622 GPCPD1Q9NPB8 672 aa7.19□□□□□ -1.26
SCFD1-204ENST00000463622 CLCN1P35523 988 aa7.17□□□□□ -1.26
SCFD1-204ENST00000463622 SLC6A16Q9GZN6 736 aa7.17□□□□□ -1.26
SCFD1-204ENST00000463622 FAM217BQ9NTX9 383 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-204ENST00000463622 EMID1Q96A84 441 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-204ENST00000463622 TMUB1Q9BVT8 246 aa7.17□□□□□ -1.26
SCFD1-204ENST00000463622 KDM4AO75164 1064 aa7.16□□□□□ -1.26
SCFD1-204ENST00000463622 TTLL12Q14166 644 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-204ENST00000463622 RNF19BQ6ZMZ0 732 aa7.16□□□□□ -1.26
SCFD1-204ENST00000463622 THAP11Q96EK4 314 aa7.16□□□□□ -1.26
SCFD1-204ENST00000463622 GUCA2AQ02747 115 aa7.15□□□□□ -1.26
SCFD1-204ENST00000463622 SSTR3P32745 418 aaPredicted RBP7.15□□□□□ -1.27
SCFD1-204ENST00000463622 FAM160A2Q8N612 972 aaPredicted RBP7.15□□□□□ -1.27
SCFD1-204ENST00000463622 PRDM9Q9NQV7 894 aa7.15□□□□□ -1.27
SCFD1-204ENST00000463622 FMNL1O95466 1100 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-204ENST00000463622 PLA2G2CQ5R387 149 aa7.14□□□□□ -1.27
SCFD1-204ENST00000463622 BRICD5Q6PL45 260 aa7.13□□□□□ -1.27
SCFD1-204ENST00000463622 LIAT1Q6ZQX7 453 aa7.13□□□□□ -1.27
SCFD1-204ENST00000463622 V9GY48 417 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-204ENST00000463622 NCAPD3P42695 1498 aa7.13□□□□□ -1.27
SCFD1-204ENST00000463622 TRIM66O15016 1216 aa7.13□□□□□ -1.27
SCFD1-204ENST00000463622 GFRA3O60609 400 aa7.13□□□□□ -1.27
SCFD1-204ENST00000463622 SLC19A1P41440 591 aa7.13□□□□□ -1.27
SCFD1-204ENST00000463622 GRIPAP1Q4V328 841 aa7.13□□□□□ -1.27
SCFD1-204ENST00000463622 ANKLE1Q8NAG6 615 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms