RNA–Protein interactions for RNA: ENST00000462710.5

SRRM1-205, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-205ENST00000462710 ANKRD30AQ9BXX3 1397 aa14.35□□□□□ -0.11
SRRM1-205ENST00000462710 CFAP65Q6ZU64 1925 aaKnown RBP14.34□□□□□ -0.11
SRRM1-205ENST00000462710 TMEM131LA2VDJ0 1609 aa14.34□□□□□ -0.11
SRRM1-205ENST00000462710 UNC13BO14795 1591 aa14.34□□□□□ -0.11
SRRM1-205ENST00000462710 SPATA31A6Q5VVP1 1343 aa14.33□□□□□ -0.11
SRRM1-205ENST00000462710 MSH6P52701 1360 aa14.33□□□□□ -0.12
SRRM1-205ENST00000462710 HDGFP51858 240 aaKnown RBP14.32□□□□□ -0.12
SRRM1-205ENST00000462710 DCCP43146 1447 aa14.32□□□□□ -0.12
SRRM1-205ENST00000462710 POTEAQ6S8J7 498 aa14.3□□□□□ -0.12
SRRM1-205ENST00000462710 SETD1AO15047 1707 aaKnown RBP14.3□□□□□ -0.12
SRRM1-205ENST00000462710 TBX22Q9Y458 520 aa14.3□□□□□ -0.12
SRRM1-205ENST00000462710 IDI1Q13907 227 aa14.29□□□□□ -0.12
SRRM1-205ENST00000462710 PROSER2Q86WR7 435 aaPredicted RBP14.28□□□□□ -0.12
SRRM1-205ENST00000462710 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.28□□□□□ -0.12
SRRM1-205ENST00000462710 LAMC1P11047 1609 aa14.28□□□□□ -0.12
SRRM1-205ENST00000462710 TRPM2O94759 1503 aa14.27□□□□□ -0.12
SRRM1-205ENST00000462710 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.27□□□□□ -0.12
SRRM1-205ENST00000462710 MYO5BQ9ULV0 1848 aa14.27□□□□□ -0.13
SRRM1-205ENST00000462710 IQGAP3Q86VI3 1631 aa14.26□□□□□ -0.13
SRRM1-205ENST00000462710 RIMS2Q9UQ26 1411 aa14.26□□□□□ -0.13
SRRM1-205ENST00000462710 NHSL1Q5SYE7 1610 aa14.26□□□□□ -0.13
SRRM1-205ENST00000462710 XRN1Q8IZH2 1706 aaKnown RBP14.25□□□□□ -0.13
SRRM1-205ENST00000462710 SLAIN2Q9P270 581 aa14.25□□□□□ -0.13
SRRM1-205ENST00000462710 KANK4Q5T7N3 995 aaPredicted RBP14.25□□□□□ -0.13
SRRM1-205ENST00000462710 ZNF772Q68DY9 489 aaPredicted RBP14.25□□□□□ -0.13
SRRM1-205ENST00000462710 STAG3Q9UJ98 1225 aa14.24□□□□□ -0.13
SRRM1-205ENST00000462710 ADAMTS13Q76LX8 1427 aa14.24□□□□□ -0.13
SRRM1-205ENST00000462710 SETBP1Q9Y6X0 1596 aa14.23□□□□□ -0.13
SRRM1-205ENST00000462710 LRP6O75581 1613 aa14.23□□□□□ -0.13
SRRM1-205ENST00000462710 SETD5Q9C0A6 1442 aa14.22□□□□□ -0.13
SRRM1-205ENST00000462710 E9PCH4 1651 aa14.21□□□□□ -0.13
SRRM1-205ENST00000462710 RRP7BPQ9NSQ0 103 aa14.21□□□□□ -0.13
SRRM1-205ENST00000462710 PRAG1Q86YV5 1406 aa14.21□□□□□ -0.13
SRRM1-205ENST00000462710 ROCK1Q13464 1354 aa14.21□□□□□ -0.13
SRRM1-205ENST00000462710 CADPS2Q86UW7 1296 aa14.2□□□□□ -0.14
SRRM1-205ENST00000462710 ANKRD50Q9ULJ7 1429 aa14.2□□□□□ -0.14
SRRM1-205ENST00000462710 C19orf44Q9H6X5 657 aa14.18□□□□□ -0.14
SRRM1-205ENST00000462710 NRXN3Q9Y4C0 1643 aa14.18□□□□□ -0.14
SRRM1-205ENST00000462710 SLC26A8Q96RN1 970 aa14.17□□□□□ -0.14
SRRM1-205ENST00000462710 ASXL1Q8IXJ9 1541 aa14.16□□□□□ -0.14
SRRM1-205ENST00000462710 UPF1Q92900 1129 aaKnown RBP eCLIP14.16□□□□□ -0.14
SRRM1-205ENST00000462710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.14□□□□□ -0.153e-9■■■□□ 18.1
SRRM1-205ENST00000462710 COL22A1Q8NFW1 1626 aaPredicted RBP14.13□□□□□ -0.15
SRRM1-205ENST00000462710 MST1RQ04912 1400 aa14.12□□□□□ -0.15
SRRM1-205ENST00000462710 SPHKAPQ2M3C7 1700 aa14.12□□□□□ -0.15
SRRM1-205ENST00000462710 PTPRUQ92729 1446 aa14.12□□□□□ -0.15
SRRM1-205ENST00000462710 ATF3P18847 181 aa14.1□□□□□ -0.15
SRRM1-205ENST00000462710 ADGRL3Q9HAR2 1447 aa14.1□□□□□ -0.15
SRRM1-205ENST00000462710 RXRBP28702 533 aa14.1□□□□□ -0.15
SRRM1-205ENST00000462710 APLP2Q06481 763 aa14.09□□□□□ -0.15
SRRM1-205ENST00000462710 PTCH1Q13635 1447 aa14.09□□□□□ -0.15
SRRM1-205ENST00000462710 PPP1R15AO75807 674 aaPredicted RBP14.09□□□□□ -0.15
SRRM1-205ENST00000462710 BRINP3Q76B58 766 aa14.08□□□□□ -0.16
SRRM1-205ENST00000462710 MEX3CQ5U5Q3 659 aaKnown RBP14.07□□□□□ -0.16
SRRM1-205ENST00000462710 NALCNQ8IZF0 1738 aa14.07□□□□□ -0.16
SRRM1-205ENST00000462710 PNPLA6Q8IY17 1366 aa14.07□□□□□ -0.16
SRRM1-205ENST00000462710 FOXD1Q16676 465 aa14.06□□□□□ -0.16
SRRM1-205ENST00000462710 LRRC59Q96AG4 307 aaKnown RBP14.06□□□□□ -0.16
SRRM1-205ENST00000462710 NEXMIFQ5QGS0 1516 aa14.05□□□□□ -0.16
SRRM1-205ENST00000462710 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.05□□□□□ -0.16
SRRM1-205ENST00000462710 RBM6P78332 1123 aaKnown RBP14.04□□□□□ -0.16
SRRM1-205ENST00000462710 AMOTL2Q9Y2J4 779 aa14.04□□□□□ -0.16
SRRM1-205ENST00000462710 RGS12O14924 1447 aa14.04□□□□□ -0.16
SRRM1-205ENST00000462710 SENP3Q9H4L4 574 aaPredicted RBP14.04□□□□□ -0.16
SRRM1-205ENST00000462710 MARF1Q9Y4F3 1742 aaKnown RBP14.04□□□□□ -0.16
SRRM1-205ENST00000462710 BCANQ96GW7 911 aa14.03□□□□□ -0.16
SRRM1-205ENST00000462710 AFF2P51816 1311 aa14.02□□□□□ -0.16
SRRM1-205ENST00000462710 KIF1BO60333 1816 aa14.02□□□□□ -0.17
SRRM1-205ENST00000462710 CHIC2Q9UKJ5 165 aa14.01□□□□□ -0.17
SRRM1-205ENST00000462710 ATAD2Q6PL18 1390 aa14.01□□□□□ -0.17
SRRM1-205ENST00000462710 ATRNO75882 1429 aa14.01□□□□□ -0.17
SRRM1-205ENST00000462710 C1orf167Q5SNV9 1468 aa14□□□□□ -0.17
SRRM1-205ENST00000462710 CDC42BPGQ6DT37 1551 aa13.99□□□□□ -0.17
SRRM1-205ENST00000462710 CCDC125Q86Z20 511 aa13.99□□□□□ -0.17
SRRM1-205ENST00000462710 RBM33Q96EV2 1170 aaKnown RBP13.99□□□□□ -0.17
SRRM1-205ENST00000462710 CLTCL1P53675 1640 aa13.99□□□□□ -0.17
SRRM1-205ENST00000462710 SOS2Q07890 1332 aaPredicted RBP13.99□□□□□ -0.17
SRRM1-205ENST00000462710 C14orf37Q86TY3 774 aa13.98□□□□□ -0.17
SRRM1-205ENST00000462710 HFM1A2PYH4 1435 aa13.98□□□□□ -0.17
SRRM1-205ENST00000462710 NGLY1Q96IV0 654 aa13.98□□□□□ -0.17
SRRM1-205ENST00000462710 RPGRIP1LQ68CZ1 1315 aa13.97□□□□□ -0.17
SRRM1-205ENST00000462710 MYOM2P54296 1465 aa13.96□□□□□ -0.17
SRRM1-205ENST00000462710 FNBP4Q8N3X1 1017 aaPredicted RBP13.96□□□□□ -0.17
SRRM1-205ENST00000462710 KNDC1Q76NI1 1749 aa13.96□□□□□ -0.17
SRRM1-205ENST00000462710 METP08581 1390 aa13.96□□□□□ -0.18
SRRM1-205ENST00000462710 TRIM52Q96A61 297 aa13.95□□□□□ -0.18
SRRM1-205ENST00000462710 NUP155O75694 1391 aa13.95□□□□□ -0.18
SRRM1-205ENST00000462710 PPLO60437 1756 aa13.95□□□□□ -0.18
SRRM1-205ENST00000462710 QTRT2Q9H974 415 aaKnown RBP13.94□□□□□ -0.18
SRRM1-205ENST00000462710 KIF1AQ12756 1690 aa13.94□□□□□ -0.18
SRRM1-205ENST00000462710 LRP5O75197 1615 aa13.93□□□□□ -0.18
SRRM1-205ENST00000462710 TRPC5Q9UL62 973 aaPredicted RBP13.93□□□□□ -0.18
SRRM1-205ENST00000462710 LOC105371045A0A1W2PR82 267 aa13.93□□□□□ -0.18
SRRM1-205ENST00000462710 TECPR2O15040 1411 aa13.92□□□□□ -0.18
SRRM1-205ENST00000462710 PXDNQ92626 1479 aa13.91□□□□□ -0.18
SRRM1-205ENST00000462710 FAM50AQ14320 339 aaKnown RBP13.91□□□□□ -0.18
SRRM1-205ENST00000462710 CHGAP10645 457 aaKnown RBP13.91□□□□□ -0.18
SRRM1-205ENST00000462710 NWD2Q9ULI1 1742 aa13.89□□□□□ -0.19
SRRM1-205ENST00000462710 LRPPRCP42704 1394 aaKnown RBP13.89□□□□□ -0.19
SRRM1-205ENST00000462710 IFT172Q9UG01 1749 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 184.8 ms