RNA–Protein interactions for RNA: ENST00000462527.2

EIF3A-202, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

TSL 2

Gene EIF3A, Length 1,192 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-202ENST00000462527 RFC5P40937 340 aa11.93□□□□□ -0.5
EIF3A-202ENST00000462527 BEGAINQ9BUH8 593 aa11.93□□□□□ -0.5
EIF3A-202ENST00000462527 OCEL1Q9H607 264 aa11.93□□□□□ -0.5
EIF3A-202ENST00000462527 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.92□□□□□ -0.5
EIF3A-202ENST00000462527 ABL2P42684 1182 aa11.92□□□□□ -0.5
EIF3A-202ENST00000462527 ERCC3P19447 782 aa11.91□□□□□ -0.5
EIF3A-202ENST00000462527 TMUB1Q9BVT8 246 aa11.91□□□□□ -0.5
EIF3A-202ENST00000462527 PDCD7Q8N8D1 485 aaKnown RBP11.9□□□□□ -0.5
EIF3A-202ENST00000462527 DRC1Q96MC2 740 aa11.9□□□□□ -0.5
EIF3A-202ENST00000462527 NESP48681 1621 aa11.89□□□□□ -0.51
EIF3A-202ENST00000462527 OSBPP22059 807 aa11.89□□□□□ -0.51
EIF3A-202ENST00000462527 BRD2P25440 801 aaKnown RBP11.89□□□□□ -0.51
EIF3A-202ENST00000462527 MAMSTRQ6ZN01 415 aa11.89□□□□□ -0.51
EIF3A-202ENST00000462527 MRRFQ96E11 262 aaKnown RBP11.89□□□□□ -0.51
EIF3A-202ENST00000462527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.89□□□□□ -0.513e-7■■■■■ 32.4
EIF3A-202ENST00000462527 POM121CA8CG34 1229 aa11.88□□□□□ -0.51
EIF3A-202ENST00000462527 CLK2P49760 499 aaKnown RBP11.88□□□□□ -0.51
EIF3A-202ENST00000462527 B4GALNT3Q6L9W6 998 aa11.88□□□□□ -0.51
EIF3A-202ENST00000462527 SCUBE2Q9NQ36 999 aa11.88□□□□□ -0.51
EIF3A-202ENST00000462527 NCLP19338 710 aaKnown RBP11.87□□□□□ -0.51
EIF3A-202ENST00000462527 MDM2Q00987 491 aaPredicted RBP11.87□□□□□ -0.51
EIF3A-202ENST00000462527 GNEQ9Y223 722 aaKnown RBP11.87□□□□□ -0.51
EIF3A-202ENST00000462527 KIF21AQ7Z4S6 1674 aa11.86□□□□□ -0.51
EIF3A-202ENST00000462527 PRDM2Q13029 1718 aa11.86□□□□□ -0.51
EIF3A-202ENST00000462527 MYSM1Q5VVJ2 828 aa11.85□□□□□ -0.51
EIF3A-202ENST00000462527 SOCS7O14512 581 aa11.84□□□□□ -0.51
EIF3A-202ENST00000462527 HDGFL1Q5TGJ6 251 aa11.84□□□□□ -0.51
EIF3A-202ENST00000462527 DPY19L2Q6NUT2 758 aa11.84□□□□□ -0.51
EIF3A-202ENST00000462527 SRPK2P78362 688 aaKnown RBP11.83□□□□□ -0.52
EIF3A-202ENST00000462527 MAP3K9P80192 1104 aa11.83□□□□□ -0.52
EIF3A-202ENST00000462527 PTGDRQ13258 359 aa11.83□□□□□ -0.52
EIF3A-202ENST00000462527 DIXDC1Q155Q3 683 aa11.83□□□□□ -0.52
EIF3A-202ENST00000462527 MTMR14Q8NCE2 650 aa11.83□□□□□ -0.52
EIF3A-202ENST00000462527 SPATA32Q96LK8 384 aa11.83□□□□□ -0.52
EIF3A-202ENST00000462527 KIAA1522Q9P206 1035 aaPredicted RBP11.83□□□□□ -0.52
EIF3A-202ENST00000462527 LAMC3Q9Y6N6 1575 aa11.83□□□□□ -0.52
EIF3A-202ENST00000462527 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
EIF3A-202ENST00000462527 CARNS1A5YM72 827 aa11.82□□□□□ -0.52
EIF3A-202ENST00000462527 CFAP70Q5T0N1 1121 aa11.82□□□□□ -0.52
EIF3A-202ENST00000462527 SREK1Q8WXA9 508 aaKnown RBP11.82□□□□□ -0.52
EIF3A-202ENST00000462527 TSR1Q2NL82 804 aaKnown RBP11.81□□□□□ -0.52
EIF3A-202ENST00000462527 ILDR1Q86SU0 546 aaPredicted RBP11.81□□□□□ -0.52
EIF3A-202ENST00000462527 SMARCA5O60264 1052 aaPredicted RBP11.8□□□□□ -0.52
EIF3A-202ENST00000462527 TCF3P15923 654 aa11.8□□□□□ -0.52
EIF3A-202ENST00000462527 DSG2Q14126 1118 aa11.8□□□□□ -0.52
EIF3A-202ENST00000462527 PPP2R2DQ66LE6 453 aa11.8□□□□□ -0.52
EIF3A-202ENST00000462527 SIRT1Q96EB6 747 aa11.8□□□□□ -0.52
EIF3A-202ENST00000462527 C8orf37Q96NL8 207 aa11.8□□□□□ -0.52
EIF3A-202ENST00000462527 ANKRD13AQ8IZ07 590 aa11.79□□□□□ -0.52
EIF3A-202ENST00000462527 CCER1Q8TC90 406 aaPredicted RBP11.79□□□□□ -0.52
EIF3A-202ENST00000462527 PPP1R12CQ9BZL4 782 aa11.78□□□□□ -0.52
EIF3A-202ENST00000462527 TXNDC2Q86VQ3 553 aa11.77□□□□□ -0.53
EIF3A-202ENST00000462527 CWC22Q9HCG8 908 aaKnown RBP11.77□□□□□ -0.53
EIF3A-202ENST00000462527 FAM217BQ9NTX9 383 aaPredicted RBP11.77□□□□□ -0.53
EIF3A-202ENST00000462527 TBC1D2BQ9UPU7 963 aa11.77□□□□□ -0.53
EIF3A-202ENST00000462527 PTGER2P43116 358 aa11.76□□□□□ -0.53
EIF3A-202ENST00000462527 DHX37Q8IY37 1157 aaKnown RBP11.76□□□□□ -0.53
EIF3A-202ENST00000462527 SLAIN1Q8ND83 568 aa11.76□□□□□ -0.53
EIF3A-202ENST00000462527 ATG7O95352 703 aa11.75□□□□□ -0.53
EIF3A-202ENST00000462527 WASHC4Q2M389 1173 aa11.75□□□□□ -0.53
EIF3A-202ENST00000462527 ARID4BQ4LE39 1312 aaPredicted RBP11.75□□□□□ -0.53
EIF3A-202ENST00000462527 TMEM88BA6NKF7 163 aa11.74□□□□□ -0.53
EIF3A-202ENST00000462527 FOXK1P85037 733 aa11.74□□□□□ -0.53
EIF3A-202ENST00000462527 ZNF16P17020 682 aaPredicted RBP11.73□□□□□ -0.53
EIF3A-202ENST00000462527 THOC2Q8NI27 1593 aaKnown RBP11.73□□□□□ -0.53
EIF3A-202ENST00000462527 TMC2Q8TDI7 906 aa11.73□□□□□ -0.53
EIF3A-202ENST00000462527 CADPSQ9ULU8 1353 aa11.73□□□□□ -0.53
EIF3A-202ENST00000462527 CFTRP13569 1480 aa11.72□□□□□ -0.53
EIF3A-202ENST00000462527 ERCC6Q03468 1493 aa11.72□□□□□ -0.53
EIF3A-202ENST00000462527 LMOD1P29536 600 aaPredicted RBP11.72□□□□□ -0.53
EIF3A-202ENST00000462527 UBXN4Q92575 508 aa11.72□□□□□ -0.53
EIF3A-202ENST00000462527 L3MBTL3Q96JM7 780 aaPredicted RBP11.72□□□□□ -0.53
EIF3A-202ENST00000462527 BCL2L13Q9BXK5 485 aa11.72□□□□□ -0.53
EIF3A-202ENST00000462527 TBC1D2Q9BYX2 928 aa11.72□□□□□ -0.53
EIF3A-202ENST00000462527 DDX12PQ92771 950 aa11.71□□□□□ -0.53
EIF3A-202ENST00000462527 FAM163AQ96GL9 167 aaPredicted RBP11.7□□□□□ -0.54
EIF3A-202ENST00000462527 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.7□□□□□ -0.54
EIF3A-202ENST00000462527 PALM3A6NDB9 673 aaPredicted RBP11.69□□□□□ -0.54
EIF3A-202ENST00000462527 ZC3H6P61129 1189 aaKnown RBP11.69□□□□□ -0.54
EIF3A-202ENST00000462527 SF3A1Q15459 793 aaKnown RBP11.69□□□□□ -0.54
EIF3A-202ENST00000462527 LCE2DQ5TA82 110 aaPredicted RBP11.68□□□□□ -0.54
EIF3A-202ENST00000462527 DNAJC14Q6Y2X3 702 aaPredicted RBP11.68□□□□□ -0.54
EIF3A-202ENST00000462527 ADAMTS19Q8TE59 1207 aa11.68□□□□□ -0.54
EIF3A-202ENST00000462527 C3orf67Q6ZVT6 689 aa11.67□□□□□ -0.54
EIF3A-202ENST00000462527 PLPP6Q8IY26 295 aa11.67□□□□□ -0.54
EIF3A-202ENST00000462527 PPP1R1BQ9UD71 204 aaPredicted RBP11.67□□□□□ -0.54
EIF3A-202ENST00000462527 BOLA1Q9Y3E2 137 aa11.67□□□□□ -0.54
EIF3A-202ENST00000462527 FANCD2Q9BXW9 1451 aa11.66□□□□□ -0.54
EIF3A-202ENST00000462527 RIC3Q7Z5B4 369 aa11.66□□□□□ -0.54
EIF3A-202ENST00000462527 PHOX2BQ99453 314 aa11.66□□□□□ -0.54
EIF3A-202ENST00000462527 NDUFB9Q9Y6M9 179 aa11.66□□□□□ -0.54
EIF3A-202ENST00000462527 TUSC1Q2TAM9 212 aa11.65□□□□□ -0.54
EIF3A-202ENST00000462527 ZNF326Q5BKZ1 582 aaKnown RBP11.65□□□□□ -0.54
EIF3A-202ENST00000462527 FAM9AQ8IZU1 332 aaPredicted RBP11.65□□□□□ -0.54
EIF3A-202ENST00000462527 LIMD1Q9UGP4 676 aa11.65□□□□□ -0.54
EIF3A-202ENST00000462527 CEP164Q9UPV0 1460 aa11.64□□□□□ -0.55
EIF3A-202ENST00000462527 PDS5BQ9NTI5 1447 aa11.64□□□□□ -0.55
EIF3A-202ENST00000462527 ANKRD62A6NC57 917 aa11.64□□□□□ -0.55
EIF3A-202ENST00000462527 FBXO31Q5XUX0 539 aaPredicted RBP11.64□□□□□ -0.55
EIF3A-202ENST00000462527 GIPC2Q8TF65 315 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms