RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 ZNF521Q96K83 1311 aa15.36■□□□□ 0.05
PDZRN3-203ENST00000462146 RGS3P49796 1198 aa15.36■□□□□ 0.05
PDZRN3-203ENST00000462146 KNSTRNQ9Y448 316 aa15.36■□□□□ 0.05
PDZRN3-203ENST00000462146 MADDQ8WXG6 1647 aa15.36■□□□□ 0.05
PDZRN3-203ENST00000462146 AMER1Q5JTC6 1135 aaPredicted RBP15.35■□□□□ 0.05
PDZRN3-203ENST00000462146 RSPH4AQ5TD94 716 aa15.35■□□□□ 0.05
PDZRN3-203ENST00000462146 SPINK5Q9NQ38 1064 aaPredicted RBP15.35■□□□□ 0.05
PDZRN3-203ENST00000462146 MYOM1P52179 1685 aa15.35■□□□□ 0.05
PDZRN3-203ENST00000462146 GOLGA2Q08379 1002 aa15.34■□□□□ 0.05
PDZRN3-203ENST00000462146 BRPF3Q9ULD4 1205 aa15.33■□□□□ 0.05
PDZRN3-203ENST00000462146 FAM161AQ3B820 660 aa15.33■□□□□ 0.04
PDZRN3-203ENST00000462146 ATP10AO60312 1499 aa15.32■□□□□ 0.04
PDZRN3-203ENST00000462146 SYNMO15061 1565 aa15.31■□□□□ 0.04
PDZRN3-203ENST00000462146 DUOX2Q9NRD8 1548 aa15.31■□□□□ 0.04
PDZRN3-203ENST00000462146 SLFN5Q08AF3 891 aa15.31■□□□□ 0.04
PDZRN3-203ENST00000462146 GSE1Q14687 1217 aa15.31■□□□□ 0.04
PDZRN3-203ENST00000462146 BCAR3O75815 825 aa15.3■□□□□ 0.04
PDZRN3-203ENST00000462146 SPHKAPQ2M3C7 1700 aa15.3■□□□□ 0.04
PDZRN3-203ENST00000462146 FRAT1Q92837 279 aaPredicted RBP15.3■□□□□ 0.04
PDZRN3-203ENST00000462146 ASXL1Q8IXJ9 1541 aa15.3■□□□□ 0.04
PDZRN3-203ENST00000462146 DMRT2Q9Y5R5 561 aa15.3■□□□□ 0.04
PDZRN3-203ENST00000462146 VIRMAQ69YN4 1812 aaKnown RBP15.29■□□□□ 0.04
PDZRN3-203ENST00000462146 DAXXQ9UER7 740 aaPredicted RBP15.29■□□□□ 0.04
PDZRN3-203ENST00000462146 APAF1O14727 1248 aa15.28■□□□□ 0.04
PDZRN3-203ENST00000462146 CEP152O94986 1710 aa15.27■□□□□ 0.04
PDZRN3-203ENST00000462146 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.27■□□□□ 0.03
PDZRN3-203ENST00000462146 ERCC6L2Q5T890 1561 aa15.27■□□□□ 0.03
PDZRN3-203ENST00000462146 FRAT2O75474 233 aaPredicted RBP15.27■□□□□ 0.03
PDZRN3-203ENST00000462146 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.27■□□□□ 0.03
PDZRN3-203ENST00000462146 PIK3C2GO75747 1445 aa15.26■□□□□ 0.03
PDZRN3-203ENST00000462146 TRMT2AQ8IZ69 625 aaKnown RBP15.26■□□□□ 0.03
PDZRN3-203ENST00000462146 CLTCL1P53675 1640 aa15.26■□□□□ 0.03
PDZRN3-203ENST00000462146 IGHDP01880 384 aa15.26■□□□□ 0.03
PDZRN3-203ENST00000462146 NKTRP30414 1462 aaKnown RBP15.25■□□□□ 0.03
PDZRN3-203ENST00000462146 SCAF11Q99590 1463 aaKnown RBP15.25■□□□□ 0.03
PDZRN3-203ENST00000462146 KDM5AP29375 1690 aaKnown RBP15.24■□□□□ 0.03
PDZRN3-203ENST00000462146 ABCC2Q92887 1545 aa15.24■□□□□ 0.03
PDZRN3-203ENST00000462146 TRAPPC8Q9Y2L5 1435 aa15.23■□□□□ 0.03
PDZRN3-203ENST00000462146 EIF3AQ14152 1382 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-203ENST00000462146 TRPM2O94759 1503 aa15.22■□□□□ 0.03
PDZRN3-203ENST00000462146 USP19O94966 1318 aa15.21■□□□□ 0.03
PDZRN3-203ENST00000462146 SEC24BO95487 1268 aa15.21■□□□□ 0.03
PDZRN3-203ENST00000462146 PRKCSHP14314 528 aaPredicted RBP15.2■□□□□ 0.02
PDZRN3-203ENST00000462146 ABCC1P33527 1531 aa15.2■□□□□ 0.02
PDZRN3-203ENST00000462146 CDCA8Q53HL2 280 aa15.2■□□□□ 0.02
PDZRN3-203ENST00000462146 PANK1Q8TE04 598 aa15.2■□□□□ 0.02
PDZRN3-203ENST00000462146 SCAPERQ9BY12 1400 aa15.19■□□□□ 0.02
PDZRN3-203ENST00000462146 CARD14Q9BXL6 1004 aa15.19■□□□□ 0.02
PDZRN3-203ENST00000462146 COG6Q9Y2V7 657 aa15.19■□□□□ 0.02
PDZRN3-203ENST00000462146 E9PSI1 815 aa15.18■□□□□ 0.02
PDZRN3-203ENST00000462146 ERVK-7P63135 1459 aa15.18■□□□□ 0.02
PDZRN3-203ENST00000462146 UGGT1Q9NYU2 1555 aa15.18■□□□□ 0.02
PDZRN3-203ENST00000462146 PLCH2O75038 1416 aa15.17■□□□□ 0.02
PDZRN3-203ENST00000462146 NPC1L1Q9UHC9 1359 aa15.17■□□□□ 0.02
PDZRN3-203ENST00000462146 CFAP70Q5T0N1 1121 aa15.17■□□□□ 0.02
PDZRN3-203ENST00000462146 AFAP1Q8N556 730 aa15.16■□□□□ 0.02
PDZRN3-203ENST00000462146 RIMBP3CA6NJZ7 1639 aa15.16■□□□□ 0.02
PDZRN3-203ENST00000462146 RIMBP3BA6NNM3 1639 aa15.16■□□□□ 0.02
PDZRN3-203ENST00000462146 RIMBP3Q9UFD9 1639 aa15.16■□□□□ 0.02
PDZRN3-203ENST00000462146 ABCA6Q8N139 1617 aa15.16■□□□□ 0.02
PDZRN3-203ENST00000462146 TNNQ9UQP3 1299 aa15.16■□□□□ 0.02
PDZRN3-203ENST00000462146 ZCCHC11Q5TAX3 1644 aaKnown RBP15.15■□□□□ 0.02
PDZRN3-203ENST00000462146 PTPRTO14522 1441 aa15.15■□□□□ 0.02
PDZRN3-203ENST00000462146 NEUROD2Q15784 382 aa15.15■□□□□ 0.02
PDZRN3-203ENST00000462146 CANXP27824 592 aaKnown RBP15.15■□□□□ 0.02
PDZRN3-203ENST00000462146 RRP7AQ9Y3A4 280 aaKnown RBP15.15■□□□□ 0.02
PDZRN3-203ENST00000462146 CENPJQ9HC77 1338 aaPredicted RBP15.15■□□□□ 0.02
PDZRN3-203ENST00000462146 SHPRHQ149N8 1683 aa15.14■□□□□ 0.01
PDZRN3-203ENST00000462146 CLUAP1Q96AJ1 413 aa15.14■□□□□ 0.01
PDZRN3-203ENST00000462146 KIAA1210Q9ULL0 1709 aa15.14■□□□□ 0.01
PDZRN3-203ENST00000462146 ZFYVE16Q7Z3T8 1539 aa15.14■□□□□ 0.01
PDZRN3-203ENST00000462146 EFCAB2Q5VUJ9 269 aa15.14■□□□□ 0.01
PDZRN3-203ENST00000462146 NLRP1Q9C000 1473 aa15.14■□□□□ 0.01
PDZRN3-203ENST00000462146 WWC1Q8IX03 1113 aa15.13■□□□□ 0.01
PDZRN3-203ENST00000462146 SPAG9O60271 1321 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-203ENST00000462146 TET3O43151 1660 aa15.13■□□□□ 0.01
PDZRN3-203ENST00000462146 DEPDC5O75140 1603 aa15.13■□□□□ 0.01
PDZRN3-203ENST00000462146 TNNT2P45379 298 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-203ENST00000462146 ADGRF5Q8IZF2 1346 aa15.13■□□□□ 0.01
PDZRN3-203ENST00000462146 SLKQ9H2G2 1235 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-203ENST00000462146 CGNL1Q0VF96 1302 aa15.12■□□□□ 0.01
PDZRN3-203ENST00000462146 MAP3K4Q9Y6R4 1608 aa15.12■□□□□ 0.01
PDZRN3-203ENST00000462146 BCL2L13Q9BXK5 485 aa15.11■□□□□ 0.01
PDZRN3-203ENST00000462146 POGKQ9P215 609 aa15.11■□□□□ 0.01
PDZRN3-203ENST00000462146 MROH2AA6NES4 1674 aa15.11■□□□□ 0.01
PDZRN3-203ENST00000462146 PDE3AQ14432 1141 aa15.11■□□□□ 0.01
PDZRN3-203ENST00000462146 RLBP1P12271 317 aa15.1■□□□□ 0.01
PDZRN3-203ENST00000462146 PCDHB15Q9Y5E8 787 aa15.09■□□□□ 0.01
PDZRN3-203ENST00000462146 KIF1BO60333 1816 aa15.08■□□□□ 0.01
PDZRN3-203ENST00000462146 IFT172Q9UG01 1749 aa15.08■□□□□ 0
PDZRN3-203ENST00000462146 MAPK8IP3Q9UPT6 1336 aa15.08■□□□□ 0
PDZRN3-203ENST00000462146 POLR3AO14802 1390 aaPredicted RBP15.07■□□□□ 0
PDZRN3-203ENST00000462146 RARSP54136 660 aaKnown RBP15.07■□□□□ 0
PDZRN3-203ENST00000462146 NSD3Q9BZ95 1437 aa15.07■□□□□ 0
PDZRN3-203ENST00000462146 KIF3BO15066 747 aa15.06■□□□□ 0
PDZRN3-203ENST00000462146 VWDEQ8N2E2 1590 aa15.06■□□□□ 0
PDZRN3-203ENST00000462146 CFAP65Q6ZU64 1925 aaKnown RBP15.05■□□□□ 0
PDZRN3-203ENST00000462146 UHRF1BP1LA0JNW5 1464 aa15.05■□□□□ 0
PDZRN3-203ENST00000462146 IQSEC2Q5JU85 1478 aa15.05■□□□□ 0
PDZRN3-203ENST00000462146 TCP11L2Q8N4U5 519 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms