RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 ANKRD30AQ9BXX3 1397 aa21.6■■□□□ 1.05
PABPC4-208ENST00000461578 SLAIN2Q9P270 581 aa21.59■■□□□ 1.05
PABPC4-208ENST00000461578 FGD6Q6ZV73 1430 aa21.57■■□□□ 1.04
PABPC4-208ENST00000461578 JCADQ9P266 1359 aa21.56■■□□□ 1.04
PABPC4-208ENST00000461578 APLP2Q06481 763 aa21.55■■□□□ 1.04
PABPC4-208ENST00000461578 SLC52A1Q9NWF4 448 aa21.55■■□□□ 1.04
PABPC4-208ENST00000461578 MYO5BQ9ULV0 1848 aa21.55■■□□□ 1.04
PABPC4-208ENST00000461578 PPP1R15AO75807 674 aaPredicted RBP21.54■■□□□ 1.04
PABPC4-208ENST00000461578 CHD2O14647 1828 aaKnown RBP21.52■■□□□ 1.04
PABPC4-208ENST00000461578 GCC2Q8IWJ2 1684 aa21.52■■□□□ 1.04
PABPC4-208ENST00000461578 COL16A1Q07092 1604 aaPredicted RBP21.51■■□□□ 1.03
PABPC4-208ENST00000461578 PLEKHG1Q9ULL1 1385 aa21.51■■□□□ 1.03
PABPC4-208ENST00000461578 ZFYVE9O95405 1425 aa21.51■■□□□ 1.03
PABPC4-208ENST00000461578 RIMS2Q9UQ26 1411 aa21.51■■□□□ 1.03
PABPC4-208ENST00000461578 C14orf37Q86TY3 774 aa21.5■■□□□ 1.03
PABPC4-208ENST00000461578 LRP6O75581 1613 aa21.49■■□□□ 1.03
PABPC4-208ENST00000461578 MEX3CQ5U5Q3 659 aaKnown RBP21.49■■□□□ 1.03
PABPC4-208ENST00000461578 CHGAP10645 457 aaKnown RBP21.47■■□□□ 1.03
PABPC4-208ENST00000461578 RPRD2Q5VT52 1461 aaKnown RBP21.46■■□□□ 1.03
PABPC4-208ENST00000461578 NUTM2DQ5VT03 806 aaPredicted RBP21.46■■□□□ 1.03
PABPC4-208ENST00000461578 TRIM52Q96A61 297 aa21.46■■□□□ 1.03
PABPC4-208ENST00000461578 TMEM131LA2VDJ0 1609 aa21.46■■□□□ 1.03
PABPC4-208ENST00000461578 ADGRL2O95490 1459 aa21.45■■□□□ 1.03
PABPC4-208ENST00000461578 HDGFP51858 240 aaKnown RBP21.45■■□□□ 1.02
PABPC4-208ENST00000461578 FAM50AQ14320 339 aaKnown RBP21.44■■□□□ 1.02
PABPC4-208ENST00000461578 SPATA31A6Q5VVP1 1343 aa21.44■■□□□ 1.02
PABPC4-208ENST00000461578 ANKRD50Q9ULJ7 1429 aa21.44■■□□□ 1.02
PABPC4-208ENST00000461578 TBX22Q9Y458 520 aa21.43■■□□□ 1.02
PABPC4-208ENST00000461578 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.43■■□□□ 1.02
PABPC4-208ENST00000461578 ZNF772Q68DY9 489 aaPredicted RBP21.41■■□□□ 1.02
PABPC4-208ENST00000461578 UPF1Q92900 1129 aaKnown RBP eCLIP21.41■■□□□ 1.02
PABPC4-208ENST00000461578 NCOA3Q9Y6Q9 1424 aa21.4■■□□□ 1.02
PABPC4-208ENST00000461578 ATF3P18847 181 aa21.4■■□□□ 1.02
PABPC4-208ENST00000461578 CADPS2Q86UW7 1296 aa21.4■■□□□ 1.02
PABPC4-208ENST00000461578 AHDC1Q5TGY3 1603 aaPredicted RBP21.4■■□□□ 1.02
PABPC4-208ENST00000461578 ADAMTS13Q76LX8 1427 aa21.39■■□□□ 1.02
PABPC4-208ENST00000461578 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.39■■□□□ 1.01
PABPC4-208ENST00000461578 SHPRHQ149N8 1683 aa21.39■■□□□ 1.01
PABPC4-208ENST00000461578 C19orf44Q9H6X5 657 aa21.38■■□□□ 1.01
PABPC4-208ENST00000461578 NUTM2BA6NNL0 878 aaPredicted RBP21.37■■□□□ 1.01
PABPC4-208ENST00000461578 NUTM2EB1AL46 878 aaPredicted RBP21.37■■□□□ 1.01
PABPC4-208ENST00000461578 NUTM2AQ8IVF1 878 aaPredicted RBP21.37■■□□□ 1.01
PABPC4-208ENST00000461578 DIP2AQ14689 1571 aa21.36■■□□□ 1.01
PABPC4-208ENST00000461578 E9PCH4 1651 aa21.35■■□□□ 1.01
PABPC4-208ENST00000461578 RXRBP28702 533 aa21.34■■□□□ 1.01
PABPC4-208ENST00000461578 UNC13BO14795 1591 aa21.33■■□□□ 1.01
PABPC4-208ENST00000461578 BRINP3Q76B58 766 aa21.33■■□□□ 1.01
PABPC4-208ENST00000461578 AMOTL2Q9Y2J4 779 aa21.33■■□□□ 1.01
PABPC4-208ENST00000461578 PIK3R4Q99570 1358 aa21.33■■□□□ 1
PABPC4-208ENST00000461578 TRPM2O94759 1503 aa21.32■■□□□ 1
PABPC4-208ENST00000461578 PTPRUQ92729 1446 aa21.31■■□□□ 1
PABPC4-208ENST00000461578 AFF2P51816 1311 aa21.29■■□□□ 1
PABPC4-208ENST00000461578 ASXL1Q8IXJ9 1541 aa21.28■■□□□ 1
PABPC4-208ENST00000461578 IQGAP3Q86VI3 1631 aa21.26■□□□□ 0.99
PABPC4-208ENST00000461578 DCCP43146 1447 aa21.24■□□□□ 0.99
PABPC4-208ENST00000461578 CDK12Q9NYV4 1490 aaPredicted RBP21.24■□□□□ 0.99
PABPC4-208ENST00000461578 MST1RQ04912 1400 aa21.23■□□□□ 0.99
PABPC4-208ENST00000461578 DDX17Q92841 729 aaKnown RBP21.23■□□□□ 0.99
PABPC4-208ENST00000461578 XRN1Q8IZH2 1706 aaKnown RBP21.23■□□□□ 0.99
PABPC4-208ENST00000461578 NHSL1Q5SYE7 1610 aa21.22■□□□□ 0.99
PABPC4-208ENST00000461578 NRXN3Q9Y4C0 1643 aa21.22■□□□□ 0.99
PABPC4-208ENST00000461578 SETD5Q9C0A6 1442 aa21.22■□□□□ 0.99
PABPC4-208ENST00000461578 C8orf37Q96NL8 207 aa21.22■□□□□ 0.99
PABPC4-208ENST00000461578 NUP155O75694 1391 aa21.22■□□□□ 0.99
PABPC4-208ENST00000461578 LRRC59Q96AG4 307 aaKnown RBP21.2■□□□□ 0.98
PABPC4-208ENST00000461578 RGS12O14924 1447 aa21.2■□□□□ 0.98
PABPC4-208ENST00000461578 ZNF326Q5BKZ1 582 aaKnown RBP21.19■□□□□ 0.98
PABPC4-208ENST00000461578 QTRT2Q9H974 415 aaKnown RBP21.19■□□□□ 0.98
PABPC4-208ENST00000461578 METP08581 1390 aa21.18■□□□□ 0.98
PABPC4-208ENST00000461578 SETBP1Q9Y6X0 1596 aa21.18■□□□□ 0.98
PABPC4-208ENST00000461578 ROCK1Q13464 1354 aa21.17■□□□□ 0.98
PABPC4-208ENST00000461578 PNPLA6Q8IY17 1366 aa21.17■□□□□ 0.98
PABPC4-208ENST00000461578 ITGAEP38570 1179 aa21.16■□□□□ 0.98
PABPC4-208ENST00000461578 RBM6P78332 1123 aaKnown RBP21.15■□□□□ 0.98
PABPC4-208ENST00000461578 SPHKAPQ2M3C7 1700 aa21.15■□□□□ 0.98
PABPC4-208ENST00000461578 ADGRL3Q9HAR2 1447 aa21.14■□□□□ 0.98
PABPC4-208ENST00000461578 ADAMTS2O95450 1211 aa21.14■□□□□ 0.97
PABPC4-208ENST00000461578 NALCNQ8IZF0 1738 aa21.14■□□□□ 0.97
PABPC4-208ENST00000461578 NGLY1Q96IV0 654 aa21.12■□□□□ 0.97
PABPC4-208ENST00000461578 C1orf167Q5SNV9 1468 aa21.08■□□□□ 0.97
PABPC4-208ENST00000461578 NEXMIFQ5QGS0 1516 aa21.07■□□□□ 0.96
PABPC4-208ENST00000461578 CLTCL1P53675 1640 aa21.06■□□□□ 0.96
PABPC4-208ENST00000461578 ORAI2Q96SN7 254 aa21.05■□□□□ 0.96
PABPC4-208ENST00000461578 USP21Q9UK80 565 aa21.04■□□□□ 0.96
PABPC4-208ENST00000461578 ATAD2Q6PL18 1390 aa21.04■□□□□ 0.96
PABPC4-208ENST00000461578 TRPC5Q9UL62 973 aaPredicted RBP21.01■□□□□ 0.95
PABPC4-208ENST00000461578 SOS2Q07890 1332 aaPredicted RBP21.01■□□□□ 0.95
PABPC4-208ENST00000461578 LAMC1P11047 1609 aa21■□□□□ 0.95
PABPC4-208ENST00000461578 ROBO2Q9HCK4 1378 aa21■□□□□ 0.95
PABPC4-208ENST00000461578 KIF1BO60333 1816 aa21■□□□□ 0.95
PABPC4-208ENST00000461578 PPARGC1BQ86YN6 1023 aaKnown RBP21■□□□□ 0.95
PABPC4-208ENST00000461578 PTCH1Q13635 1447 aa20.99■□□□□ 0.95
PABPC4-208ENST00000461578 SRCAPQ6ZRS2 3230 aa20.97■□□□□ 0.95
PABPC4-208ENST00000461578 ATRNO75882 1429 aa20.95■□□□□ 0.95
PABPC4-208ENST00000461578 FNBP4Q8N3X1 1017 aaPredicted RBP20.95■□□□□ 0.94
PABPC4-208ENST00000461578 COL22A1Q8NFW1 1626 aaPredicted RBP20.94■□□□□ 0.94
PABPC4-208ENST00000461578 ZRANB1Q9UGI0 708 aa20.94■□□□□ 0.94
PABPC4-208ENST00000461578 VGFO15240 615 aaPredicted RBP20.93■□□□□ 0.94
PABPC4-208ENST00000461578 XPCQ01831 940 aaPredicted RBP20.91■□□□□ 0.94
PABPC4-208ENST00000461578 ESCO1Q5FWF5 840 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms