RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 CHGAP10645 457 aaKnown RBP23.61■■□□□ 1.37
NUP50-213ENST00000461437 SLC26A8Q96RN1 970 aa23.61■■□□□ 1.37
NUP50-213ENST00000461437 SPHKAPQ2M3C7 1700 aa23.59■■□□□ 1.37
NUP50-213ENST00000461437 NUTM2DQ5VT03 806 aaPredicted RBP23.57■■□□□ 1.36
NUP50-213ENST00000461437 ZFYVE9O95405 1425 aa23.57■■□□□ 1.36
NUP50-213ENST00000461437 NAIPQ13075 1403 aa23.57■■□□□ 1.36
NUP50-213ENST00000461437 RIMS2Q9UQ26 1411 aa23.57■■□□□ 1.36
NUP50-213ENST00000461437 TOM1O60784 492 aa23.56■■□□□ 1.36
NUP50-213ENST00000461437 BCANQ96GW7 911 aa23.56■■□□□ 1.36
NUP50-213ENST00000461437 HSPA1LP34931 641 aa23.53■■□□□ 1.36
NUP50-213ENST00000461437 RBM33Q96EV2 1170 aaKnown RBP23.53■■□□□ 1.36
NUP50-213ENST00000461437 PPP1R15AO75807 674 aaPredicted RBP23.51■■□□□ 1.35
NUP50-213ENST00000461437 CHD2O14647 1828 aaKnown RBP23.49■■□□□ 1.35
NUP50-213ENST00000461437 PLEKHG1Q9ULL1 1385 aa23.48■■□□□ 1.35
NUP50-213ENST00000461437 NWD1Q149M9 1564 aa23.48■■□□□ 1.35
NUP50-213ENST00000461437 CLTCL1P53675 1640 aa23.48■■□□□ 1.35
NUP50-213ENST00000461437 KCNA6P17658 529 aa23.46■■□□□ 1.35
NUP50-213ENST00000461437 TMEM94Q12767 1356 aa23.46■■□□□ 1.35
NUP50-213ENST00000461437 HFM1A2PYH4 1435 aa23.45■■□□□ 1.34
NUP50-213ENST00000461437 TRIM52Q96A61 297 aa23.44■■□□□ 1.34
NUP50-213ENST00000461437 PROSER2Q86WR7 435 aaPredicted RBP23.42■■□□□ 1.34
NUP50-213ENST00000461437 KIF1BO60333 1816 aa23.42■■□□□ 1.34
NUP50-213ENST00000461437 ADAMTS13Q76LX8 1427 aa23.42■■□□□ 1.34
NUP50-213ENST00000461437 TRPM2O94759 1503 aa23.4■■□□□ 1.34
NUP50-213ENST00000461437 NKTRP30414 1462 aaKnown RBP23.39■■□□□ 1.34
NUP50-213ENST00000461437 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.39■■□□□ 1.33
NUP50-213ENST00000461437 NRXN3Q9Y4C0 1643 aa23.39■■□□□ 1.33
NUP50-213ENST00000461437 HDGFP51858 240 aaKnown RBP23.38■■□□□ 1.33
NUP50-213ENST00000461437 ZNF326Q5BKZ1 582 aaKnown RBP23.37■■□□□ 1.33
NUP50-213ENST00000461437 MED1Q15648 1581 aaPredicted RBP23.36■■□□□ 1.33
NUP50-213ENST00000461437 DIP2AQ14689 1571 aa23.35■■□□□ 1.33
NUP50-213ENST00000461437 NEXMIFQ5QGS0 1516 aa23.34■■□□□ 1.33
NUP50-213ENST00000461437 FOXD1Q16676 465 aa23.34■■□□□ 1.33
NUP50-213ENST00000461437 TBX22Q9Y458 520 aa23.34■■□□□ 1.33
NUP50-213ENST00000461437 ROBO1Q9Y6N7 1651 aa23.33■■□□□ 1.33
NUP50-213ENST00000461437 SLC4A1APQ9BWU0 796 aaKnown RBP23.33■■□□□ 1.33
NUP50-213ENST00000461437 PTPRUQ92729 1446 aa23.32■■□□□ 1.32
NUP50-213ENST00000461437 SETBP1Q9Y6X0 1596 aa23.29■■□□□ 1.32
NUP50-213ENST00000461437 MSH6P52701 1360 aa23.27■■□□□ 1.32
NUP50-213ENST00000461437 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.27■■□□□ 1.32
NUP50-213ENST00000461437 XRN1Q8IZH2 1706 aaKnown RBP23.26■■□□□ 1.31
NUP50-213ENST00000461437 AMOTL2Q9Y2J4 779 aa23.25■■□□□ 1.31
NUP50-213ENST00000461437 PPLO60437 1756 aa23.24■■□□□ 1.31
NUP50-213ENST00000461437 C14orf37Q86TY3 774 aa23.24■■□□□ 1.31
NUP50-213ENST00000461437 METP08581 1390 aa23.24■■□□□ 1.31
NUP50-213ENST00000461437 FAM135BQ49AJ0 1406 aa23.24■■□□□ 1.31
NUP50-213ENST00000461437 PIK3R4Q99570 1358 aa23.23■■□□□ 1.31
NUP50-213ENST00000461437 SETD1AO15047 1707 aaKnown RBP23.22■■□□□ 1.31
NUP50-213ENST00000461437 PHLPP1O60346 1717 aa23.21■■□□□ 1.31
NUP50-213ENST00000461437 MPHOSPH9Q99550 1183 aa23.19■■□□□ 1.3
NUP50-213ENST00000461437 SLAIN2Q9P270 581 aa23.19■■□□□ 1.3
NUP50-213ENST00000461437 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
NUP50-213ENST00000461437 NALCNQ8IZF0 1738 aa23.15■■□□□ 1.3
NUP50-213ENST00000461437 IFT172Q9UG01 1749 aa23.14■■□□□ 1.3
NUP50-213ENST00000461437 NCOA3Q9Y6Q9 1424 aa23.14■■□□□ 1.29
NUP50-213ENST00000461437 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
NUP50-213ENST00000461437 CCDC144AA2RUR9 1427 aa23.13■■□□□ 1.29
NUP50-213ENST00000461437 RGL3Q3MIN7 710 aa23.12■■□□□ 1.29
NUP50-213ENST00000461437 C19orf44Q9H6X5 657 aa23.12■■□□□ 1.29
NUP50-213ENST00000461437 RAB3GAP2Q9H2M9 1393 aa23.11■■□□□ 1.29
NUP50-213ENST00000461437 COL16A1Q07092 1604 aaPredicted RBP23.11■■□□□ 1.29
NUP50-213ENST00000461437 ATF3P18847 181 aa23.1■■□□□ 1.29
NUP50-213ENST00000461437 VGFO15240 615 aaPredicted RBP23.09■■□□□ 1.29
NUP50-213ENST00000461437 SPATA31E1Q6ZUB1 1445 aa23.08■■□□□ 1.29
NUP50-213ENST00000461437 CADPS2Q86UW7 1296 aa23.08■■□□□ 1.29
NUP50-213ENST00000461437 ADGRF5Q8IZF2 1346 aa23.08■■□□□ 1.28
NUP50-213ENST00000461437 RPGRIP1LQ68CZ1 1315 aa23.07■■□□□ 1.28
NUP50-213ENST00000461437 ROBO2Q9HCK4 1378 aa23.04■■□□□ 1.28
NUP50-213ENST00000461437 MST1RQ04912 1400 aa23.04■■□□□ 1.28
NUP50-213ENST00000461437 ADGRL3Q9HAR2 1447 aa23.04■■□□□ 1.28
NUP50-213ENST00000461437 RGS17Q9UGC6 210 aaPredicted RBP23.03■■□□□ 1.28
NUP50-213ENST00000461437 AHDC1Q5TGY3 1603 aaPredicted RBP23.03■■□□□ 1.28
NUP50-213ENST00000461437 BRINP3Q76B58 766 aa23.02■■□□□ 1.28
NUP50-213ENST00000461437 DCCP43146 1447 aa23.01■■□□□ 1.27
NUP50-213ENST00000461437 ASXL1Q8IXJ9 1541 aa23.01■■□□□ 1.27
NUP50-213ENST00000461437 PTCH1Q13635 1447 aa22.99■■□□□ 1.27
NUP50-213ENST00000461437 DDX17Q92841 729 aaKnown RBP22.99■■□□□ 1.27
NUP50-213ENST00000461437 NHSL1Q5SYE7 1610 aa22.99■■□□□ 1.27
NUP50-213ENST00000461437 JCADQ9P266 1359 aa22.98■■□□□ 1.27
NUP50-213ENST00000461437 SHPRHQ149N8 1683 aa22.97■■□□□ 1.27
NUP50-213ENST00000461437 STK26Q9P289 416 aa22.96■■□□□ 1.27
NUP50-213ENST00000461437 LRP6O75581 1613 aa22.96■■□□□ 1.27
NUP50-213ENST00000461437 TMEM132EQ6IEE7 984 aa22.95■■□□□ 1.26
NUP50-213ENST00000461437 PIK3C2GO75747 1445 aa22.94■■□□□ 1.26
NUP50-213ENST00000461437 ANKRD30BQ9BXX2 1392 aa22.94■■□□□ 1.26
NUP50-213ENST00000461437 KNDC1Q76NI1 1749 aa22.93■■□□□ 1.26
NUP50-213ENST00000461437 PRAG1Q86YV5 1406 aa22.92■■□□□ 1.26
NUP50-213ENST00000461437 C1orf167Q5SNV9 1468 aa22.92■■□□□ 1.26
NUP50-213ENST00000461437 POTEAQ6S8J7 498 aa22.91■■□□□ 1.26
NUP50-213ENST00000461437 WAPLQ7Z5K2 1190 aa22.91■■□□□ 1.26
NUP50-213ENST00000461437 PLEKHH1Q9ULM0 1364 aa22.89■■□□□ 1.26
NUP50-213ENST00000461437 ORAI2Q96SN7 254 aa22.89■■□□□ 1.25
NUP50-213ENST00000461437 LRPPRCP42704 1394 aaKnown RBP22.88■■□□□ 1.25
NUP50-213ENST00000461437 ACIN1Q9UKV3 1341 aaKnown RBP22.87■■□□□ 1.25
NUP50-213ENST00000461437 MYOM2P54296 1465 aa22.86■■□□□ 1.25
NUP50-213ENST00000461437 NRXN1Q9ULB1 1477 aa22.86■■□□□ 1.25
NUP50-213ENST00000461437 NUTM2BA6NNL0 878 aaPredicted RBP22.86■■□□□ 1.25
NUP50-213ENST00000461437 NUTM2EB1AL46 878 aaPredicted RBP22.86■■□□□ 1.25
NUP50-213ENST00000461437 CFAP70Q5T0N1 1121 aa22.86■■□□□ 1.25
NUP50-213ENST00000461437 NUTM2AQ8IVF1 878 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms