RNA–Protein interactions for RNA: ENST00000461370.1

CCT4-202, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2

Gene CCT4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-202ENST00000461370 WBP1LQ9NX94 342 aa9.53□□□□□ -0.88
CCT4-202ENST00000461370 PPP4CP60510 307 aa9.52□□□□□ -0.89
CCT4-202ENST00000461370 NECTIN2Q92692 538 aa9.52□□□□□ -0.89
CCT4-202ENST00000461370 MINK1Q8N4C8 1332 aaPredicted RBP9.52□□□□□ -0.89
CCT4-202ENST00000461370 IRF6O14896 467 aa9.5□□□□□ -0.89
CCT4-202ENST00000461370 CCDC102AQ96A19 550 aa9.5□□□□□ -0.89
CCT4-202ENST00000461370 ZMYND10O75800 440 aa9.49□□□□□ -0.89
CCT4-202ENST00000461370 BARGINQ6ZT62 677 aa9.48□□□□□ -0.89
CCT4-202ENST00000461370 KRI1Q8N9T8 703 aaKnown RBP9.47□□□□□ -0.89
CCT4-202ENST00000461370 PHOX2BQ99453 314 aa9.47□□□□□ -0.89
CCT4-202ENST00000461370 NLRP7Q8WX94 980 aa9.46□□□□□ -0.9
CCT4-202ENST00000461370 DAXXQ9UER7 740 aaPredicted RBP9.45□□□□□ -0.9
CCT4-202ENST00000461370 PLA2G2EQ9NZK7 142 aa9.44□□□□□ -0.9
CCT4-202ENST00000461370 PRR14Q9BWN1 585 aa9.43□□□□□ -0.9
CCT4-202ENST00000461370 APLP1P51693 650 aa9.42□□□□□ -0.9
CCT4-202ENST00000461370 SULF1Q8IWU6 871 aa9.42□□□□□ -0.9
CCT4-202ENST00000461370 CFHP08603 1231 aa9.41□□□□□ -0.9
CCT4-202ENST00000461370 RSPH4AQ5TD94 716 aa9.41□□□□□ -0.9
CCT4-202ENST00000461370 DDX11L8A8MPP1 907 aa9.4□□□□□ -0.9
CCT4-202ENST00000461370 ITGBL1O95965 494 aaPredicted RBP9.4□□□□□ -0.9
CCT4-202ENST00000461370 MDM2Q00987 491 aaPredicted RBP9.4□□□□□ -0.9
CCT4-202ENST00000461370 KMT5BQ4FZB7 885 aa9.4□□□□□ -0.9
CCT4-202ENST00000461370 NISCHQ9Y2I1 1504 aa9.4□□□□□ -0.91
CCT4-202ENST00000461370 SLC10A3P09131 477 aa9.39□□□□□ -0.91
CCT4-202ENST00000461370 RDH13Q8NBN7 331 aa9.39□□□□□ -0.91
CCT4-202ENST00000461370 CLCN1P35523 988 aa9.38□□□□□ -0.91
CCT4-202ENST00000461370 GPCPD1Q9NPB8 672 aa9.38□□□□□ -0.91
CCT4-202ENST00000461370 TTLL12Q14166 644 aaPredicted RBP9.36□□□□□ -0.91
CCT4-202ENST00000461370 AMHR2Q16671 573 aa9.36□□□□□ -0.91
CCT4-202ENST00000461370 IFFO2Q5TF58 517 aa9.36□□□□□ -0.91
CCT4-202ENST00000461370 AK7Q96M32 723 aa9.36□□□□□ -0.91
CCT4-202ENST00000461370 MTRQ99707 1265 aa9.36□□□□□ -0.91
CCT4-202ENST00000461370 PCDHB3Q9Y5E6 796 aa9.36□□□□□ -0.91
CCT4-202ENST00000461370 ACTN4O43707 911 aaKnown RBP9.35□□□□□ -0.91
CCT4-202ENST00000461370 KCNC4Q03721 635 aa9.35□□□□□ -0.91
CCT4-202ENST00000461370 IL21Q9HBE4 155 aa9.35□□□□□ -0.91
CCT4-202ENST00000461370 TJAP1Q5JTD0 557 aa9.34□□□□□ -0.91
CCT4-202ENST00000461370 SLC24A3Q9HC58 644 aa9.34□□□□□ -0.91
CCT4-202ENST00000461370 COPS2P61201 443 aa9.33□□□□□ -0.92
CCT4-202ENST00000461370 TRIM66O15016 1216 aa9.32□□□□□ -0.92
CCT4-202ENST00000461370 CD46P15529 392 aa9.32□□□□□ -0.92
CCT4-202ENST00000461370 TMUB1Q9BVT8 246 aa9.32□□□□□ -0.92
CCT4-202ENST00000461370 FAM217BQ9NTX9 383 aaPredicted RBP9.32□□□□□ -0.92
CCT4-202ENST00000461370 GCGRP47871 477 aa9.31□□□□□ -0.92
CCT4-202ENST00000461370 BLOC1S3Q6QNY0 202 aa9.31□□□□□ -0.92
CCT4-202ENST00000461370 REPIN1Q9BWE0 567 aaKnown RBP9.3□□□□□ -0.92
CCT4-202ENST00000461370 FUT2Q10981 343 aa9.29□□□□□ -0.92
CCT4-202ENST00000461370 GIGYF2Q6Y7W6 1299 aaKnown RBP9.29□□□□□ -0.92
CCT4-202ENST00000461370 PARP9Q8IXQ6 854 aa9.29□□□□□ -0.92
CCT4-202ENST00000461370 A0A0G2JS52 829 aa9.28□□□□□ -0.92
CCT4-202ENST00000461370 ZNF516Q92618 1163 aa9.28□□□□□ -0.92
CCT4-202ENST00000461370 ZPR1O75312 459 aa9.27□□□□□ -0.93
CCT4-202ENST00000461370 NR1I2O75469 434 aa9.27□□□□□ -0.93
CCT4-202ENST00000461370 SSTR3P32745 418 aaPredicted RBP9.26□□□□□ -0.93
CCT4-202ENST00000461370 ATP6V1AP38606 617 aa9.26□□□□□ -0.93
CCT4-202ENST00000461370 PDE4DQ08499 809 aa9.26□□□□□ -0.93
CCT4-202ENST00000461370 PUS10Q3MIT2 529 aaKnown RBP9.26□□□□□ -0.93
CCT4-202ENST00000461370 KDM4AO75164 1064 aa9.25□□□□□ -0.93
CCT4-202ENST00000461370 GRIPAP1Q4V328 841 aa9.25□□□□□ -0.93
CCT4-202ENST00000461370 TLL1O43897 1013 aa9.24□□□□□ -0.93
CCT4-202ENST00000461370 MORN1Q5T089 497 aa9.24□□□□□ -0.93
CCT4-202ENST00000461370 USP46P62068 366 aa9.23□□□□□ -0.93
CCT4-202ENST00000461370 SCUBE3Q8IX30 993 aa9.22□□□□□ -0.93
CCT4-202ENST00000461370 TPRNQ4KMQ1 711 aa9.21□□□□□ -0.94
CCT4-202ENST00000461370 NUTM1Q86Y26 1132 aa9.21□□□□□ -0.94
CCT4-202ENST00000461370 NKX2-3Q8TAU0 364 aa9.21□□□□□ -0.94
CCT4-202ENST00000461370 HOXA2O43364 376 aa9.2□□□□□ -0.94
CCT4-202ENST00000461370 ADH1BP00325 375 aa9.2□□□□□ -0.94
CCT4-202ENST00000461370 MS4A1P11836 297 aa9.2□□□□□ -0.94
CCT4-202ENST00000461370 BEGAINQ9BUH8 593 aa9.2□□□□□ -0.94
CCT4-202ENST00000461370 SLC27A5Q9Y2P5 690 aa9.2□□□□□ -0.94
CCT4-202ENST00000461370 GGCXP38435 758 aa9.19□□□□□ -0.94
CCT4-202ENST00000461370 Q3C1V9 767 aa9.17□□□□□ -0.94
CCT4-202ENST00000461370 PPP1R18Q6NYC8 613 aa9.17□□□□□ -0.94
CCT4-202ENST00000461370 SPSB2Q99619 263 aa9.17□□□□□ -0.94
CCT4-202ENST00000461370 RGS20O76081 388 aa9.16□□□□□ -0.94
CCT4-202ENST00000461370 FMNL1O95466 1100 aaPredicted RBP9.16□□□□□ -0.94
CCT4-202ENST00000461370 SPIRE2Q8WWL2 714 aa9.16□□□□□ -0.94
CCT4-202ENST00000461370 HLA-CQ95604 372 aa9.16□□□□□ -0.94
CCT4-202ENST00000461370 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.16□□□□□ -0.94
CCT4-202ENST00000461370 SALL2Q9Y467 1007 aaPredicted RBP9.16□□□□□ -0.94
CCT4-202ENST00000461370 DIXDC1Q155Q3 683 aa9.15□□□□□ -0.94
CCT4-202ENST00000461370 THAP11Q96EK4 314 aa9.15□□□□□ -0.94
CCT4-202ENST00000461370 S1PR4O95977 384 aa9.14□□□□□ -0.95
CCT4-202ENST00000461370 RNF19BQ6ZMZ0 732 aa9.14□□□□□ -0.95
CCT4-202ENST00000461370 SLC6A16Q9GZN6 736 aa9.14□□□□□ -0.95
CCT4-202ENST00000461370 GUCA2AQ02747 115 aa9.13□□□□□ -0.95
CCT4-202ENST00000461370 BRICD5Q6PL45 260 aa9.13□□□□□ -0.95
CCT4-202ENST00000461370 TBC1D2Q9BYX2 928 aa9.13□□□□□ -0.95
CCT4-202ENST00000461370 KDM4CQ9H3R0 1056 aa9.13□□□□□ -0.95
CCT4-202ENST00000461370 GPBP1L1Q9HC44 474 aaPredicted RBP9.13□□□□□ -0.95
CCT4-202ENST00000461370 FDX1P10109 184 aa9.12□□□□□ -0.95
CCT4-202ENST00000461370 RNF223E7ERA6 249 aa9.11□□□□□ -0.95
CCT4-202ENST00000461370 MSS51Q4VC12 460 aa9.11□□□□□ -0.95
CCT4-202ENST00000461370 MOXD2PA6NHM9 499 aa9.1□□□□□ -0.95
CCT4-202ENST00000461370 NDUFV2P19404 249 aa9.09□□□□□ -0.95
CCT4-202ENST00000461370 ANKLE1Q8NAG6 615 aa9.09□□□□□ -0.95
CCT4-202ENST00000461370 USB1Q9BQ65 265 aaKnown RBP9.09□□□□□ -0.95
CCT4-202ENST00000461370 PRDM9Q9NQV7 894 aa9.09□□□□□ -0.95
CCT4-202ENST00000461370 ABCC9O60706 1549 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms