RNA–Protein interactions for RNA: ENST00000460827.1

PCYT1A-213, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 2

Gene PCYT1A, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-213ENST00000460827 NOS1P29475 1434 aa18.44■□□□□ 0.54
PCYT1A-213ENST00000460827 SLAIN2Q9P270 581 aa18.44■□□□□ 0.54
PCYT1A-213ENST00000460827 ADGRB3O60242 1522 aa18.44■□□□□ 0.54
PCYT1A-213ENST00000460827 MSH6P52701 1360 aa18.43■□□□□ 0.54
PCYT1A-213ENST00000460827 CHD2O14647 1828 aaKnown RBP18.42■□□□□ 0.54
PCYT1A-213ENST00000460827 COL16A1Q07092 1604 aaPredicted RBP18.42■□□□□ 0.54
PCYT1A-213ENST00000460827 PTPN23Q9H3S7 1636 aa18.41■□□□□ 0.54
PCYT1A-213ENST00000460827 DAPK1P53355 1430 aa18.4■□□□□ 0.54
PCYT1A-213ENST00000460827 MYO5BQ9ULV0 1848 aa18.39■□□□□ 0.54
PCYT1A-213ENST00000460827 LRP6O75581 1613 aa18.39■□□□□ 0.53
PCYT1A-213ENST00000460827 ZFYVE9O95405 1425 aa18.38■□□□□ 0.53
PCYT1A-213ENST00000460827 UPF1Q92900 1129 aaKnown RBP eCLIP18.36■□□□□ 0.53
PCYT1A-213ENST00000460827 SLC52A1Q9NWF4 448 aa18.36■□□□□ 0.53
PCYT1A-213ENST00000460827 PLEKHG1Q9ULL1 1385 aa18.36■□□□□ 0.53
PCYT1A-213ENST00000460827 FGD6Q6ZV73 1430 aa18.34■□□□□ 0.53
PCYT1A-213ENST00000460827 ANKRD30AQ9BXX3 1397 aa18.34■□□□□ 0.53
PCYT1A-213ENST00000460827 SPATA31A6Q5VVP1 1343 aa18.34■□□□□ 0.53
PCYT1A-213ENST00000460827 BCANQ96GW7 911 aa18.34■□□□□ 0.53
PCYT1A-213ENST00000460827 CHIC2Q9UKJ5 165 aa18.33■□□□□ 0.52
PCYT1A-213ENST00000460827 NCOA3Q9Y6Q9 1424 aa18.32■□□□□ 0.52
PCYT1A-213ENST00000460827 SHPRHQ149N8 1683 aa18.32■□□□□ 0.52
PCYT1A-213ENST00000460827 AHDC1Q5TGY3 1603 aaPredicted RBP18.32■□□□□ 0.52
PCYT1A-213ENST00000460827 RIMS2Q9UQ26 1411 aa18.32■□□□□ 0.52
PCYT1A-213ENST00000460827 GCC2Q8IWJ2 1684 aa18.31■□□□□ 0.52
PCYT1A-213ENST00000460827 TMEM131LA2VDJ0 1609 aa18.31■□□□□ 0.52
PCYT1A-213ENST00000460827 ZNF772Q68DY9 489 aaPredicted RBP18.31■□□□□ 0.52
PCYT1A-213ENST00000460827 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.31■□□□□ 0.52
PCYT1A-213ENST00000460827 RPRD2Q5VT52 1461 aaKnown RBP18.31■□□□□ 0.52
PCYT1A-213ENST00000460827 TRIM52Q96A61 297 aa18.3■□□□□ 0.52
PCYT1A-213ENST00000460827 TBX22Q9Y458 520 aa18.3■□□□□ 0.52
PCYT1A-213ENST00000460827 LOC105371045A0A1W2PR82 267 aa18.29■□□□□ 0.52
PCYT1A-213ENST00000460827 MEX3CQ5U5Q3 659 aaKnown RBP18.28■□□□□ 0.52
PCYT1A-213ENST00000460827 ADGRL2O95490 1459 aa18.27■□□□□ 0.52
PCYT1A-213ENST00000460827 ADAMTS13Q76LX8 1427 aa18.27■□□□□ 0.52
PCYT1A-213ENST00000460827 PPP1R15AO75807 674 aaPredicted RBP18.27■□□□□ 0.52
PCYT1A-213ENST00000460827 DIP2AQ14689 1571 aa18.26■□□□□ 0.51
PCYT1A-213ENST00000460827 CADPS2Q86UW7 1296 aa18.26■□□□□ 0.51
PCYT1A-213ENST00000460827 C19orf44Q9H6X5 657 aa18.26■□□□□ 0.51
PCYT1A-213ENST00000460827 C14orf37Q86TY3 774 aa18.25■□□□□ 0.51
PCYT1A-213ENST00000460827 RXRBP28702 533 aa18.24■□□□□ 0.51
PCYT1A-213ENST00000460827 HDGFP51858 240 aaKnown RBP18.24■□□□□ 0.51
PCYT1A-213ENST00000460827 CDK12Q9NYV4 1490 aaPredicted RBP18.24■□□□□ 0.51
PCYT1A-213ENST00000460827 EP400Q96L91 3159 aa18.24■□□□□ 0.51
PCYT1A-213ENST00000460827 ATF3P18847 181 aa18.23■□□□□ 0.51
PCYT1A-213ENST00000460827 PIK3R4Q99570 1358 aa18.22■□□□□ 0.51
PCYT1A-213ENST00000460827 BRINP3Q76B58 766 aa18.22■□□□□ 0.51
PCYT1A-213ENST00000460827 ANKRD50Q9ULJ7 1429 aa18.22■□□□□ 0.51
PCYT1A-213ENST00000460827 NUTM2DQ5VT03 806 aaPredicted RBP18.21■□□□□ 0.51
PCYT1A-213ENST00000460827 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.21■□□□□ 0.51
PCYT1A-213ENST00000460827 PTPRUQ92729 1446 aa18.19■□□□□ 0.5
PCYT1A-213ENST00000460827 NUTM2BA6NNL0 878 aaPredicted RBP18.18■□□□□ 0.5
PCYT1A-213ENST00000460827 NUTM2EB1AL46 878 aaPredicted RBP18.18■□□□□ 0.5
PCYT1A-213ENST00000460827 NUTM2AQ8IVF1 878 aaPredicted RBP18.18■□□□□ 0.5
PCYT1A-213ENST00000460827 E9PCH4 1651 aa18.18■□□□□ 0.5
PCYT1A-213ENST00000460827 AFF2P51816 1311 aa18.18■□□□□ 0.5
PCYT1A-213ENST00000460827 SETD5Q9C0A6 1442 aa18.17■□□□□ 0.5
PCYT1A-213ENST00000460827 TRPM2O94759 1503 aa18.17■□□□□ 0.5
PCYT1A-213ENST00000460827 ASXL1Q8IXJ9 1541 aa18.17■□□□□ 0.5
PCYT1A-213ENST00000460827 DCCP43146 1447 aa18.16■□□□□ 0.5
PCYT1A-213ENST00000460827 CHGAP10645 457 aaKnown RBP18.16■□□□□ 0.5
PCYT1A-213ENST00000460827 AMOTL2Q9Y2J4 779 aa18.16■□□□□ 0.5
PCYT1A-213ENST00000460827 UNC13BO14795 1591 aa18.16■□□□□ 0.5
PCYT1A-213ENST00000460827 NHSL1Q5SYE7 1610 aa18.16■□□□□ 0.5
PCYT1A-213ENST00000460827 APLP2Q06481 763 aa18.15■□□□□ 0.5
PCYT1A-213ENST00000460827 RGS12O14924 1447 aa18.15■□□□□ 0.5
PCYT1A-213ENST00000460827 XRN1Q8IZH2 1706 aaKnown RBP18.14■□□□□ 0.49
PCYT1A-213ENST00000460827 MST1RQ04912 1400 aa18.14■□□□□ 0.49
PCYT1A-213ENST00000460827 NRXN3Q9Y4C0 1643 aa18.12■□□□□ 0.49
PCYT1A-213ENST00000460827 FAM50AQ14320 339 aaKnown RBP18.1■□□□□ 0.49
PCYT1A-213ENST00000460827 QTRT2Q9H974 415 aaKnown RBP18.1■□□□□ 0.49
PCYT1A-213ENST00000460827 IQGAP3Q86VI3 1631 aa18.09■□□□□ 0.49
PCYT1A-213ENST00000460827 PNPLA6Q8IY17 1366 aa18.09■□□□□ 0.49
PCYT1A-213ENST00000460827 RBM6P78332 1123 aaKnown RBP18.09■□□□□ 0.49
PCYT1A-213ENST00000460827 LRRC59Q96AG4 307 aaKnown RBP18.09■□□□□ 0.49
PCYT1A-213ENST00000460827 C8orf37Q96NL8 207 aa18.09■□□□□ 0.49
PCYT1A-213ENST00000460827 SETBP1Q9Y6X0 1596 aa18.08■□□□□ 0.49
PCYT1A-213ENST00000460827 DDX17Q92841 729 aaKnown RBP18.08■□□□□ 0.48
PCYT1A-213ENST00000460827 METP08581 1390 aa18.05■□□□□ 0.48
PCYT1A-213ENST00000460827 ADGRL3Q9HAR2 1447 aa18.05■□□□□ 0.48
PCYT1A-213ENST00000460827 NALCNQ8IZF0 1738 aa18.04■□□□□ 0.48
PCYT1A-213ENST00000460827 LAMC1P11047 1609 aa18.01■□□□□ 0.47
PCYT1A-213ENST00000460827 ADAMTS2O95450 1211 aa18■□□□□ 0.47
PCYT1A-213ENST00000460827 NGLY1Q96IV0 654 aa18■□□□□ 0.47
PCYT1A-213ENST00000460827 NUP155O75694 1391 aa18■□□□□ 0.47
PCYT1A-213ENST00000460827 ROCK1Q13464 1354 aa18■□□□□ 0.47
PCYT1A-213ENST00000460827 ATAD2Q6PL18 1390 aa17.99■□□□□ 0.47
PCYT1A-213ENST00000460827 C1orf167Q5SNV9 1468 aa17.99■□□□□ 0.47
PCYT1A-213ENST00000460827 SPHKAPQ2M3C7 1700 aa17.98■□□□□ 0.47
PCYT1A-213ENST00000460827 SOS2Q07890 1332 aaPredicted RBP17.96■□□□□ 0.46
PCYT1A-213ENST00000460827 NEXMIFQ5QGS0 1516 aa17.95■□□□□ 0.46
PCYT1A-213ENST00000460827 USP21Q9UK80 565 aa17.95■□□□□ 0.46
PCYT1A-213ENST00000460827 ZNF326Q5BKZ1 582 aaKnown RBP17.94■□□□□ 0.46
PCYT1A-213ENST00000460827 FNBP4Q8N3X1 1017 aaPredicted RBP17.94■□□□□ 0.46
PCYT1A-213ENST00000460827 TRPC5Q9UL62 973 aaPredicted RBP17.94■□□□□ 0.46
PCYT1A-213ENST00000460827 ATRNO75882 1429 aa17.94■□□□□ 0.46
PCYT1A-213ENST00000460827 PTCH1Q13635 1447 aa17.93■□□□□ 0.46
PCYT1A-213ENST00000460827 ORAI2Q96SN7 254 aa17.93■□□□□ 0.46
PCYT1A-213ENST00000460827 COL22A1Q8NFW1 1626 aaPredicted RBP17.92■□□□□ 0.46
PCYT1A-213ENST00000460827 CLTCL1P53675 1640 aa17.91■□□□□ 0.46
PCYT1A-213ENST00000460827 ZRANB1Q9UGI0 708 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms