RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 SCAF1Q9H7N4 1312 aaKnown RBP17.96■□□□□ 0.46
SOX2-OT-201ENST00000460739 NAIPQ13075 1403 aa17.95■□□□□ 0.46
SOX2-OT-201ENST00000460739 NWD1Q149M9 1564 aa17.95■□□□□ 0.46
SOX2-OT-201ENST00000460739 PLEKHG1Q9ULL1 1385 aa17.94■□□□□ 0.46
SOX2-OT-201ENST00000460739 SLC26A8Q96RN1 970 aa17.94■□□□□ 0.46
SOX2-OT-201ENST00000460739 KCNA6P17658 529 aa17.93■□□□□ 0.46
SOX2-OT-201ENST00000460739 HDGFP51858 240 aaKnown RBP17.93■□□□□ 0.46
SOX2-OT-201ENST00000460739 CHD2O14647 1828 aaKnown RBP17.93■□□□□ 0.46
SOX2-OT-201ENST00000460739 HSPA1LP34931 641 aa17.92■□□□□ 0.46
SOX2-OT-201ENST00000460739 NKTRP30414 1462 aaKnown RBP17.91■□□□□ 0.46
SOX2-OT-201ENST00000460739 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.9■□□□□ 0.46
SOX2-OT-201ENST00000460739 HFM1A2PYH4 1435 aa17.89■□□□□ 0.46
SOX2-OT-201ENST00000460739 PPP1R15AO75807 674 aaPredicted RBP17.89■□□□□ 0.45
SOX2-OT-201ENST00000460739 CHGAP10645 457 aaKnown RBP17.89■□□□□ 0.45
SOX2-OT-201ENST00000460739 BCANQ96GW7 911 aa17.89■□□□□ 0.45
SOX2-OT-201ENST00000460739 DIP2AQ14689 1571 aa17.88■□□□□ 0.45
SOX2-OT-201ENST00000460739 TMEM94Q12767 1356 aa17.88■□□□□ 0.45
SOX2-OT-201ENST00000460739 TBX22Q9Y458 520 aa17.86■□□□□ 0.45
SOX2-OT-201ENST00000460739 TRPM2O94759 1503 aa17.86■□□□□ 0.45
SOX2-OT-201ENST00000460739 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
SOX2-OT-201ENST00000460739 ADAMTS13Q76LX8 1427 aa17.85■□□□□ 0.45
SOX2-OT-201ENST00000460739 PROSER2Q86WR7 435 aaPredicted RBP17.85■□□□□ 0.45
SOX2-OT-201ENST00000460739 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
SOX2-OT-201ENST00000460739 KIF1BO60333 1816 aa17.84■□□□□ 0.45
SOX2-OT-201ENST00000460739 MED1Q15648 1581 aaPredicted RBP17.83■□□□□ 0.45
SOX2-OT-201ENST00000460739 NUTM2DQ5VT03 806 aaPredicted RBP17.83■□□□□ 0.44
SOX2-OT-201ENST00000460739 ILDR2Q71H61 639 aa17.83■□□□□ 0.44
SOX2-OT-201ENST00000460739 NRXN3Q9Y4C0 1643 aa17.82■□□□□ 0.44
SOX2-OT-201ENST00000460739 PIK3R4Q99570 1358 aa17.81■□□□□ 0.44
SOX2-OT-201ENST00000460739 FAM135BQ49AJ0 1406 aa17.81■□□□□ 0.44
SOX2-OT-201ENST00000460739 SETBP1Q9Y6X0 1596 aa17.8■□□□□ 0.44
SOX2-OT-201ENST00000460739 RBM33Q96EV2 1170 aaKnown RBP17.8■□□□□ 0.44
SOX2-OT-201ENST00000460739 ROBO1Q9Y6N7 1651 aa17.8■□□□□ 0.44
SOX2-OT-201ENST00000460739 MSH6P52701 1360 aa17.79■□□□□ 0.44
SOX2-OT-201ENST00000460739 NEXMIFQ5QGS0 1516 aa17.78■□□□□ 0.44
SOX2-OT-201ENST00000460739 TRIM52Q96A61 297 aa17.78■□□□□ 0.44
SOX2-OT-201ENST00000460739 NCOA3Q9Y6Q9 1424 aa17.78■□□□□ 0.44
SOX2-OT-201ENST00000460739 ZNF326Q5BKZ1 582 aaKnown RBP17.76■□□□□ 0.43
SOX2-OT-201ENST00000460739 XRN1Q8IZH2 1706 aaKnown RBP17.75■□□□□ 0.43
SOX2-OT-201ENST00000460739 SLC4A1APQ9BWU0 796 aaKnown RBP17.75■□□□□ 0.43
SOX2-OT-201ENST00000460739 PTPRUQ92729 1446 aa17.74■□□□□ 0.43
SOX2-OT-201ENST00000460739 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.74■□□□□ 0.43
SOX2-OT-201ENST00000460739 SLAIN2Q9P270 581 aa17.72■□□□□ 0.43
SOX2-OT-201ENST00000460739 SOCS7O14512 581 aa17.71■□□□□ 0.43
SOX2-OT-201ENST00000460739 AMOTL2Q9Y2J4 779 aa17.71■□□□□ 0.43
SOX2-OT-201ENST00000460739 PPLO60437 1756 aa17.71■□□□□ 0.43
SOX2-OT-201ENST00000460739 SETD1AO15047 1707 aaKnown RBP17.69■□□□□ 0.42
SOX2-OT-201ENST00000460739 PHLPP1O60346 1717 aa17.69■□□□□ 0.42
SOX2-OT-201ENST00000460739 METP08581 1390 aa17.68■□□□□ 0.42
SOX2-OT-201ENST00000460739 C19orf44Q9H6X5 657 aa17.68■□□□□ 0.42
SOX2-OT-201ENST00000460739 C14orf37Q86TY3 774 aa17.67■□□□□ 0.42
SOX2-OT-201ENST00000460739 RPGRIP1LQ68CZ1 1315 aa17.67■□□□□ 0.42
SOX2-OT-201ENST00000460739 VGFO15240 615 aaPredicted RBP17.66■□□□□ 0.42
SOX2-OT-201ENST00000460739 CADPS2Q86UW7 1296 aa17.66■□□□□ 0.42
SOX2-OT-201ENST00000460739 DCCP43146 1447 aa17.65■□□□□ 0.42
SOX2-OT-201ENST00000460739 FOXD1Q16676 465 aa17.65■□□□□ 0.42
SOX2-OT-201ENST00000460739 ATF3P18847 181 aa17.64■□□□□ 0.41
SOX2-OT-201ENST00000460739 MPHOSPH9Q99550 1183 aa17.64■□□□□ 0.41
SOX2-OT-201ENST00000460739 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
SOX2-OT-201ENST00000460739 ACIN1Q9UKV3 1341 aaKnown RBP17.64■□□□□ 0.41
SOX2-OT-201ENST00000460739 COL16A1Q07092 1604 aaPredicted RBP17.64■□□□□ 0.41
SOX2-OT-201ENST00000460739 IFT172Q9UG01 1749 aa17.64■□□□□ 0.41
SOX2-OT-201ENST00000460739 NALCNQ8IZF0 1738 aa17.63■□□□□ 0.41
SOX2-OT-201ENST00000460739 CCDC144AA2RUR9 1427 aa17.63■□□□□ 0.41
SOX2-OT-201ENST00000460739 SETD5Q9C0A6 1442 aa17.63■□□□□ 0.41
SOX2-OT-201ENST00000460739 AHDC1Q5TGY3 1603 aaPredicted RBP17.61■□□□□ 0.41
SOX2-OT-201ENST00000460739 SPATA31E1Q6ZUB1 1445 aa17.6■□□□□ 0.41
SOX2-OT-201ENST00000460739 PRAG1Q86YV5 1406 aa17.6■□□□□ 0.41
SOX2-OT-201ENST00000460739 PTCH1Q13635 1447 aa17.59■□□□□ 0.41
SOX2-OT-201ENST00000460739 ADGRL3Q9HAR2 1447 aa17.59■□□□□ 0.41
SOX2-OT-201ENST00000460739 JCADQ9P266 1359 aa17.58■□□□□ 0.4
SOX2-OT-201ENST00000460739 MST1RQ04912 1400 aa17.57■□□□□ 0.4
SOX2-OT-201ENST00000460739 SHPRHQ149N8 1683 aa17.56■□□□□ 0.4
SOX2-OT-201ENST00000460739 BRINP3Q76B58 766 aa17.56■□□□□ 0.4
SOX2-OT-201ENST00000460739 NHSL1Q5SYE7 1610 aa17.56■□□□□ 0.4
SOX2-OT-201ENST00000460739 ASXL1Q8IXJ9 1541 aa17.56■□□□□ 0.4
SOX2-OT-201ENST00000460739 RAB3GAP2Q9H2M9 1393 aa17.55■□□□□ 0.4
SOX2-OT-201ENST00000460739 RGS17Q9UGC6 210 aaPredicted RBP17.55■□□□□ 0.4
SOX2-OT-201ENST00000460739 ANKRD30BQ9BXX2 1392 aa17.54■□□□□ 0.4
SOX2-OT-201ENST00000460739 ROBO2Q9HCK4 1378 aa17.54■□□□□ 0.4
SOX2-OT-201ENST00000460739 RGL3Q3MIN7 710 aa17.53■□□□□ 0.4
SOX2-OT-201ENST00000460739 ADGRF5Q8IZF2 1346 aa17.52■□□□□ 0.4
SOX2-OT-201ENST00000460739 KNDC1Q76NI1 1749 aa17.5■□□□□ 0.39
SOX2-OT-201ENST00000460739 PIK3C2GO75747 1445 aa17.5■□□□□ 0.39
SOX2-OT-201ENST00000460739 LAMC1P11047 1609 aa17.5■□□□□ 0.39
SOX2-OT-201ENST00000460739 SPATA31A6Q5VVP1 1343 aa17.49■□□□□ 0.39
SOX2-OT-201ENST00000460739 TECPR2O15040 1411 aa17.48■□□□□ 0.39
SOX2-OT-201ENST00000460739 LRP6O75581 1613 aa17.48■□□□□ 0.39
SOX2-OT-201ENST00000460739 C1orf167Q5SNV9 1468 aa17.48■□□□□ 0.39
SOX2-OT-201ENST00000460739 CDC42BPGQ6DT37 1551 aa17.47■□□□□ 0.39
SOX2-OT-201ENST00000460739 MYOM2P54296 1465 aa17.46■□□□□ 0.39
SOX2-OT-201ENST00000460739 NRXN1Q9ULB1 1477 aa17.46■□□□□ 0.39
SOX2-OT-201ENST00000460739 LRPPRCP42704 1394 aaKnown RBP17.45■□□□□ 0.38
SOX2-OT-201ENST00000460739 HRCP23327 699 aa17.45■□□□□ 0.38
SOX2-OT-201ENST00000460739 POTEAQ6S8J7 498 aa17.45■□□□□ 0.38
SOX2-OT-201ENST00000460739 ABCC11Q96J66 1382 aa17.44■□□□□ 0.38
SOX2-OT-201ENST00000460739 LRRC59Q96AG4 307 aaKnown RBP17.43■□□□□ 0.38
SOX2-OT-201ENST00000460739 YTHDC2Q9H6S0 1430 aaKnown RBP17.42■□□□□ 0.38
SOX2-OT-201ENST00000460739 TMEM132EQ6IEE7 984 aa17.42■□□□□ 0.38
SOX2-OT-201ENST00000460739 DDX17Q92841 729 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms