RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 MLLT3P42568 568 aaPredicted RBP8.36□□□□□ -1.07
RFC4-211ENST00000460408 DNAJB2P25686 324 aa8.35□□□□□ -1.07
RFC4-211ENST00000460408 PTGDRQ13258 359 aa8.35□□□□□ -1.07
RFC4-211ENST00000460408 BLOC1S3Q6QNY0 202 aa8.34□□□□□ -1.07
RFC4-211ENST00000460408 RNF223E7ERA6 249 aa8.33□□□□□ -1.08
RFC4-211ENST00000460408 RBM46Q8TBY0 533 aaKnown RBP8.33□□□□□ -1.08
RFC4-211ENST00000460408 EMID1Q96A84 441 aaPredicted RBP8.33□□□□□ -1.08
RFC4-211ENST00000460408 TMEM134Q9H6X4 195 aa8.33□□□□□ -1.08
RFC4-211ENST00000460408 TSHZ2Q9NRE2 1034 aa8.33□□□□□ -1.08
RFC4-211ENST00000460408 KDM2AQ9Y2K7 1162 aa8.33□□□□□ -1.08
RFC4-211ENST00000460408 ADGRG1Q9Y653 693 aa8.32□□□□□ -1.08
RFC4-211ENST00000460408 ACTN4O43707 911 aaKnown RBP8.31□□□□□ -1.08
RFC4-211ENST00000460408 SLC19A1P41440 591 aa8.31□□□□□ -1.08
RFC4-211ENST00000460408 ZNF787Q6DD87 383 aa8.31□□□□□ -1.08
RFC4-211ENST00000460408 TRIM67Q6ZTA4 783 aa8.31□□□□□ -1.08
RFC4-211ENST00000460408 KCNV2Q8TDN2 545 aa8.31□□□□□ -1.08
RFC4-211ENST00000460408 ANKLE1Q8NAG6 615 aa8.3□□□□□ -1.08
RFC4-211ENST00000460408 TLL1O43897 1013 aa8.29□□□□□ -1.08
RFC4-211ENST00000460408 KMT5BQ4FZB7 885 aa8.29□□□□□ -1.08
RFC4-211ENST00000460408 RCCD1A6NED2 376 aa8.28□□□□□ -1.08
RFC4-211ENST00000460408 SPRYD7Q5W111 196 aa8.28□□□□□ -1.08
RFC4-211ENST00000460408 PRR20EP86478 221 aa8.27□□□□□ -1.09
RFC4-211ENST00000460408 PRR20CP86479 221 aa8.27□□□□□ -1.09
RFC4-211ENST00000460408 PRR20DP86480 221 aa8.27□□□□□ -1.09
RFC4-211ENST00000460408 PRR20BP86481 221 aa8.27□□□□□ -1.09
RFC4-211ENST00000460408 PRR20AP86496 221 aa8.27□□□□□ -1.09
RFC4-211ENST00000460408 ZNF598Q86UK7 904 aaKnown RBP8.27□□□□□ -1.09
RFC4-211ENST00000460408 S1PR4O95977 384 aa8.26□□□□□ -1.09
RFC4-211ENST00000460408 CFHP08603 1231 aa8.26□□□□□ -1.09
RFC4-211ENST00000460408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.25□□□□□ -1.09
RFC4-211ENST00000460408 NUTM2FA1L443 756 aa8.25□□□□□ -1.09
RFC4-211ENST00000460408 DGAT1O75907 488 aa8.25□□□□□ -1.09
RFC4-211ENST00000460408 SLC10A3P09131 477 aa8.25□□□□□ -1.09
RFC4-211ENST00000460408 FAM161AQ3B820 660 aa8.25□□□□□ -1.09
RFC4-211ENST00000460408 LIAT1Q6ZQX7 453 aa8.25□□□□□ -1.09
RFC4-211ENST00000460408 PPEF1O14829 653 aaPredicted RBP8.24□□□□□ -1.09
RFC4-211ENST00000460408 FCHSD2O94868 740 aa8.24□□□□□ -1.09
RFC4-211ENST00000460408 ADH1BP00325 375 aa8.24□□□□□ -1.09
RFC4-211ENST00000460408 NR1I2O75469 434 aa8.23□□□□□ -1.09
RFC4-211ENST00000460408 MYT1Q01538 1121 aa8.23□□□□□ -1.09
RFC4-211ENST00000460408 PKDCCQ504Y2 493 aa8.23□□□□□ -1.09
RFC4-211ENST00000460408 ZNF775Q96BV0 537 aaPredicted RBP8.23□□□□□ -1.09
RFC4-211ENST00000460408 ZNF697Q5TEC3 545 aa8.22□□□□□ -1.09
RFC4-211ENST00000460408 PXYLP1Q8TE99 480 aa8.22□□□□□ -1.09
RFC4-211ENST00000460408 GDF9O60383 454 aa8.21□□□□□ -1.1
RFC4-211ENST00000460408 OATP04181 439 aa8.2□□□□□ -1.1
RFC4-211ENST00000460408 SLC6A16Q9GZN6 736 aa8.2□□□□□ -1.1
RFC4-211ENST00000460408 PLA2G2CQ5R387 149 aa8.19□□□□□ -1.1
RFC4-211ENST00000460408 P3H3Q8IVL6 736 aa8.19□□□□□ -1.1
RFC4-211ENST00000460408 SCUBE3Q8IX30 993 aa8.19□□□□□ -1.1
RFC4-211ENST00000460408 SEMA3EO15041 775 aa8.17□□□□□ -1.1
RFC4-211ENST00000460408 HIC1Q14526 733 aa8.17□□□□□ -1.1
RFC4-211ENST00000460408 RSPH4AQ5TD94 716 aa8.17□□□□□ -1.1
RFC4-211ENST00000460408 METTL3Q86U44 580 aaKnown RBP8.17□□□□□ -1.1
RFC4-211ENST00000460408 FAM187AA6NFU0 413 aa8.16□□□□□ -1.1
RFC4-211ENST00000460408 TNFRSF10AO00220 468 aa8.16□□□□□ -1.1
RFC4-211ENST00000460408 POTECB2RU33 542 aa8.15□□□□□ -1.1
RFC4-211ENST00000460408 PUS10Q3MIT2 529 aaKnown RBP8.15□□□□□ -1.1
RFC4-211ENST00000460408 LMOD2Q6P5Q4 547 aa8.15□□□□□ -1.1
RFC4-211ENST00000460408 BCANQ96GW7 911 aa8.15□□□□□ -1.1
RFC4-211ENST00000460408 SPSB2Q99619 263 aa8.15□□□□□ -1.1
RFC4-211ENST00000460408 PKD2L1Q9P0L9 805 aa8.13□□□□□ -1.11
RFC4-211ENST00000460408 RPIAP49247 311 aa8.12□□□□□ -1.11
RFC4-211ENST00000460408 MORN1Q5T089 497 aa8.12□□□□□ -1.11
RFC4-211ENST00000460408 AAASQ9NRG9 546 aa8.12□□□□□ -1.11
RFC4-211ENST00000460408 DAXXQ9UER7 740 aaPredicted RBP8.12□□□□□ -1.11
RFC4-211ENST00000460408 THAP11Q96EK4 314 aa8.11□□□□□ -1.11
RFC4-211ENST00000460408 TESPA1A2RU30 521 aaPredicted RBP8.1□□□□□ -1.11
RFC4-211ENST00000460408 GNPATO15228 680 aa8.1□□□□□ -1.11
RFC4-211ENST00000460408 FECHP22830 423 aa8.1□□□□□ -1.11
RFC4-211ENST00000460408 RBM26Q5T8P6 1007 aaKnown RBP8.1□□□□□ -1.11
RFC4-211ENST00000460408 ST8SIA5O15466 376 aa8.09□□□□□ -1.11
RFC4-211ENST00000460408 FOXC1Q12948 553 aa8.09□□□□□ -1.11
RFC4-211ENST00000460408 CRIPAKQ8N1N5 446 aa8.09□□□□□ -1.11
RFC4-211ENST00000460408 GPR37O15354 613 aa8.08□□□□□ -1.12
RFC4-211ENST00000460408 ATP6V1AP38606 617 aa8.08□□□□□ -1.12
RFC4-211ENST00000460408 FUT2Q10981 343 aa8.08□□□□□ -1.12
RFC4-211ENST00000460408 SMYD5Q6GMV2 418 aa8.08□□□□□ -1.12
RFC4-211ENST00000460408 FAM160A2Q8N612 972 aaPredicted RBP8.08□□□□□ -1.12
RFC4-211ENST00000460408 RDH13Q8NBN7 331 aa8.08□□□□□ -1.12
RFC4-211ENST00000460408 AVPP01185 164 aa8.07□□□□□ -1.12
RFC4-211ENST00000460408 TOR4AQ9NXH8 423 aa8.07□□□□□ -1.12
RFC4-211ENST00000460408 FCF1Q9Y324 198 aaKnown RBP8.07□□□□□ -1.12
RFC4-211ENST00000460408 SALL2Q9Y467 1007 aaPredicted RBP8.07□□□□□ -1.12
RFC4-211ENST00000460408 DDX11L8A8MPP1 907 aa8.06□□□□□ -1.12
RFC4-211ENST00000460408 CD2BP2O95400 341 aaKnown RBP8.06□□□□□ -1.12
RFC4-211ENST00000460408 FMNL1O95466 1100 aaPredicted RBP8.06□□□□□ -1.12
RFC4-211ENST00000460408 GCGRP47871 477 aa8.06□□□□□ -1.12
RFC4-211ENST00000460408 LCE2AQ5TA79 106 aaPredicted RBP8.06□□□□□ -1.12
RFC4-211ENST00000460408 SLC27A5Q9Y2P5 690 aa8.06□□□□□ -1.12
RFC4-211ENST00000460408 TREML4Q6UXN2 200 aa8.05□□□□□ -1.12
RFC4-211ENST00000460408 SULF1Q8IWU6 871 aa8.05□□□□□ -1.12
RFC4-211ENST00000460408 BRICD5Q6PL45 260 aa8.04□□□□□ -1.12
RFC4-211ENST00000460408 MSS51Q4VC12 460 aa8.03□□□□□ -1.12
RFC4-211ENST00000460408 CYP4X1Q8N118 509 aa8.03□□□□□ -1.12
RFC4-211ENST00000460408 NLRP7Q8WX94 980 aa8.03□□□□□ -1.12
RFC4-211ENST00000460408 PHOX2BQ99453 314 aa8.03□□□□□ -1.12
RFC4-211ENST00000460408 CTC1Q2NKJ3 1217 aa8.02□□□□□ -1.13
RFC4-211ENST00000460408 PRDM9Q9NQV7 894 aa8.02□□□□□ -1.13
RFC4-211ENST00000460408 DACH1Q9UI36 760 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms