RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 STAG3Q9UJ98 1225 aa20.67■□□□□ 0.9
SRRT-206ENST00000460194 ANKRD50Q9ULJ7 1429 aa20.66■□□□□ 0.9
SRRT-206ENST00000460194 NKTRP30414 1462 aaKnown RBP20.66■□□□□ 0.9
SRRT-206ENST00000460194 TMEM131LA2VDJ0 1609 aa20.66■□□□□ 0.9
SRRT-206ENST00000460194 GCC2Q8IWJ2 1684 aa20.65■□□□□ 0.9
SRRT-206ENST00000460194 UNC13BO14795 1591 aa20.63■□□□□ 0.89
SRRT-206ENST00000460194 RBM33Q96EV2 1170 aaKnown RBP20.62■□□□□ 0.89
SRRT-206ENST00000460194 PROSER2Q86WR7 435 aaPredicted RBP20.61■□□□□ 0.89
SRRT-206ENST00000460194 E9PCH4 1651 aa20.61■□□□□ 0.89
SRRT-206ENST00000460194 PLEKHG1Q9ULL1 1385 aa20.6■□□□□ 0.89
SRRT-206ENST00000460194 RIMS2Q9UQ26 1411 aa20.57■□□□□ 0.88
SRRT-206ENST00000460194 FAM50AQ14320 339 aaKnown RBP20.56■□□□□ 0.88
SRRT-206ENST00000460194 IQGAP3Q86VI3 1631 aa20.55■□□□□ 0.88
SRRT-206ENST00000460194 ADAMTS13Q76LX8 1427 aa20.54■□□□□ 0.88
SRRT-206ENST00000460194 POTEAQ6S8J7 498 aa20.54■□□□□ 0.88
SRRT-206ENST00000460194 PHLPP1O60346 1717 aa20.53■□□□□ 0.88
SRRT-206ENST00000460194 SLAIN2Q9P270 581 aa20.53■□□□□ 0.88
SRRT-206ENST00000460194 TBX22Q9Y458 520 aa20.53■□□□□ 0.88
SRRT-206ENST00000460194 MSH6P52701 1360 aa20.52■□□□□ 0.88
SRRT-206ENST00000460194 ROCK1Q13464 1354 aa20.52■□□□□ 0.88
SRRT-206ENST00000460194 NCOA3Q9Y6Q9 1424 aa20.52■□□□□ 0.87
SRRT-206ENST00000460194 COL16A1Q07092 1604 aaPredicted RBP20.51■□□□□ 0.87
SRRT-206ENST00000460194 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.49■□□□□ 0.87
SRRT-206ENST00000460194 DIP2AQ14689 1571 aa20.48■□□□□ 0.87
SRRT-206ENST00000460194 HDGFP51858 240 aaKnown RBP20.48■□□□□ 0.87
SRRT-206ENST00000460194 BCANQ96GW7 911 aa20.46■□□□□ 0.87
SRRT-206ENST00000460194 PIK3R4Q99570 1358 aa20.46■□□□□ 0.87
SRRT-206ENST00000460194 NRXN3Q9Y4C0 1643 aa20.45■□□□□ 0.87
SRRT-206ENST00000460194 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.45■□□□□ 0.86
SRRT-206ENST00000460194 PPP1R15AO75807 674 aaPredicted RBP20.44■□□□□ 0.86
SRRT-206ENST00000460194 JCADQ9P266 1359 aa20.44■□□□□ 0.86
SRRT-206ENST00000460194 PTPRUQ92729 1446 aa20.44■□□□□ 0.86
SRRT-206ENST00000460194 AHDC1Q5TGY3 1603 aaPredicted RBP20.43■□□□□ 0.86
SRRT-206ENST00000460194 NUTM2DQ5VT03 806 aaPredicted RBP20.42■□□□□ 0.86
SRRT-206ENST00000460194 LRP6O75581 1613 aa20.42■□□□□ 0.86
SRRT-206ENST00000460194 TRPM2O94759 1503 aa20.4■□□□□ 0.86
SRRT-206ENST00000460194 SHPRHQ149N8 1683 aa20.4■□□□□ 0.86
SRRT-206ENST00000460194 XRN1Q8IZH2 1706 aaKnown RBP20.4■□□□□ 0.86
SRRT-206ENST00000460194 SETD1AO15047 1707 aaKnown RBP20.39■□□□□ 0.86
SRRT-206ENST00000460194 SPHKAPQ2M3C7 1700 aa20.39■□□□□ 0.86
SRRT-206ENST00000460194 NUP155O75694 1391 aa20.39■□□□□ 0.85
SRRT-206ENST00000460194 CHGAP10645 457 aaKnown RBP20.39■□□□□ 0.85
SRRT-206ENST00000460194 C19orf44Q9H6X5 657 aa20.39■□□□□ 0.85
SRRT-206ENST00000460194 SETBP1Q9Y6X0 1596 aa20.38■□□□□ 0.85
SRRT-206ENST00000460194 CADPS2Q86UW7 1296 aa20.36■□□□□ 0.85
SRRT-206ENST00000460194 AMOTL2Q9Y2J4 779 aa20.36■□□□□ 0.85
SRRT-206ENST00000460194 SPATA31A6Q5VVP1 1343 aa20.34■□□□□ 0.85
SRRT-206ENST00000460194 DCCP43146 1447 aa20.33■□□□□ 0.84
SRRT-206ENST00000460194 BRINP3Q76B58 766 aa20.32■□□□□ 0.84
SRRT-206ENST00000460194 METP08581 1390 aa20.31■□□□□ 0.84
SRRT-206ENST00000460194 NHSL1Q5SYE7 1610 aa20.31■□□□□ 0.84
SRRT-206ENST00000460194 ATF3P18847 181 aa20.3■□□□□ 0.84
SRRT-206ENST00000460194 NEXMIFQ5QGS0 1516 aa20.3■□□□□ 0.84
SRRT-206ENST00000460194 CLTCL1P53675 1640 aa20.3■□□□□ 0.84
SRRT-206ENST00000460194 MST1RQ04912 1400 aa20.29■□□□□ 0.84
SRRT-206ENST00000460194 C14orf37Q86TY3 774 aa20.29■□□□□ 0.84
SRRT-206ENST00000460194 ASXL1Q8IXJ9 1541 aa20.28■□□□□ 0.84
SRRT-206ENST00000460194 SETD5Q9C0A6 1442 aa20.27■□□□□ 0.83
SRRT-206ENST00000460194 ITGAEP38570 1179 aa20.26■□□□□ 0.83
SRRT-206ENST00000460194 NALCNQ8IZF0 1738 aa20.26■□□□□ 0.83
SRRT-206ENST00000460194 KIF1BO60333 1816 aa20.25■□□□□ 0.83
SRRT-206ENST00000460194 ZNF772Q68DY9 489 aaPredicted RBP20.23■□□□□ 0.83
SRRT-206ENST00000460194 ADGRL3Q9HAR2 1447 aa20.22■□□□□ 0.83
SRRT-206ENST00000460194 PPARGC1BQ86YN6 1023 aaKnown RBP20.22■□□□□ 0.83
SRRT-206ENST00000460194 LAMC1P11047 1609 aa20.22■□□□□ 0.83
SRRT-206ENST00000460194 NAIPQ13075 1403 aa20.21■□□□□ 0.83
SRRT-206ENST00000460194 RRBP1Q9P2E9 1410 aaKnown RBP20.21■□□□□ 0.83
SRRT-206ENST00000460194 UPF1Q92900 1129 aaKnown RBP eCLIP20.19■□□□□ 0.82
SRRT-206ENST00000460194 CDK12Q9NYV4 1490 aaPredicted RBP20.18■□□□□ 0.82
SRRT-206ENST00000460194 ZNF326Q5BKZ1 582 aaKnown RBP20.18■□□□□ 0.82
SRRT-206ENST00000460194 PRAG1Q86YV5 1406 aa20.18■□□□□ 0.82
SRRT-206ENST00000460194 MEX3CQ5U5Q3 659 aaKnown RBP20.17■□□□□ 0.82
SRRT-206ENST00000460194 DDX17Q92841 729 aaKnown RBP20.16■□□□□ 0.82
SRRT-206ENST00000460194 LRRC59Q96AG4 307 aaKnown RBP20.15■□□□□ 0.82
SRRT-206ENST00000460194 PNPLA6Q8IY17 1366 aa20.15■□□□□ 0.82
SRRT-206ENST00000460194 PTCH1Q13635 1447 aa20.15■□□□□ 0.82
SRRT-206ENST00000460194 C1orf167Q5SNV9 1468 aa20.15■□□□□ 0.82
SRRT-206ENST00000460194 PPLO60437 1756 aa20.15■□□□□ 0.82
SRRT-206ENST00000460194 AFF2P51816 1311 aa20.13■□□□□ 0.81
SRRT-206ENST00000460194 NUTM2BA6NNL0 878 aaPredicted RBP20.13■□□□□ 0.81
SRRT-206ENST00000460194 NUTM2EB1AL46 878 aaPredicted RBP20.13■□□□□ 0.81
SRRT-206ENST00000460194 RXRBP28702 533 aa20.13■□□□□ 0.81
SRRT-206ENST00000460194 NUTM2AQ8IVF1 878 aaPredicted RBP20.13■□□□□ 0.81
SRRT-206ENST00000460194 TRIM52Q96A61 297 aa20.13■□□□□ 0.81
SRRT-206ENST00000460194 ROBO2Q9HCK4 1378 aa20.12■□□□□ 0.81
SRRT-206ENST00000460194 HFM1A2PYH4 1435 aa20.1■□□□□ 0.81
SRRT-206ENST00000460194 SOS2Q07890 1332 aaPredicted RBP20.09■□□□□ 0.81
SRRT-206ENST00000460194 RPGRIP1LQ68CZ1 1315 aa20.07■□□□□ 0.8
SRRT-206ENST00000460194 VGFO15240 615 aaPredicted RBP20.07■□□□□ 0.8
SRRT-206ENST00000460194 RGS12O14924 1447 aa20.06■□□□□ 0.8
SRRT-206ENST00000460194 ORAI2Q96SN7 254 aa20.06■□□□□ 0.8
SRRT-206ENST00000460194 COL22A1Q8NFW1 1626 aaPredicted RBP20.05■□□□□ 0.8
SRRT-206ENST00000460194 QTRT2Q9H974 415 aaKnown RBP20.04■□□□□ 0.8
SRRT-206ENST00000460194 C8orf37Q96NL8 207 aa20.03■□□□□ 0.8
SRRT-206ENST00000460194 IFT172Q9UG01 1749 aa20.02■□□□□ 0.8
SRRT-206ENST00000460194 RBM6P78332 1123 aaKnown RBP20.02■□□□□ 0.8
SRRT-206ENST00000460194 CDC42BPGQ6DT37 1551 aa20.01■□□□□ 0.79
SRRT-206ENST00000460194 SLC4A1APQ9BWU0 796 aaKnown RBP19.99■□□□□ 0.79
SRRT-206ENST00000460194 MARF1Q9Y4F3 1742 aaKnown RBP19.99■□□□□ 0.79
SRRT-206ENST00000460194 PXDNQ92626 1479 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms