RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 PADI6Q6TGC4 694 aa7.5□□□□□ -1.21
VPS8-215ENST00000460158 SLC4A3P48751 1232 aa7.49□□□□□ -1.21
VPS8-215ENST00000460158 BARGINQ6ZT62 677 aa7.49□□□□□ -1.21
VPS8-215ENST00000460158 PRKD2Q9BZL6 878 aa7.49□□□□□ -1.21
VPS8-215ENST00000460158 V9GY48 417 aaPredicted RBP7.49□□□□□ -1.21
VPS8-215ENST00000460158 SWT1Q5T5J6 900 aaKnown RBP7.48□□□□□ -1.21
VPS8-215ENST00000460158 ZNF516Q92618 1163 aa7.48□□□□□ -1.21
VPS8-215ENST00000460158 EYA1Q99502 592 aa7.48□□□□□ -1.21
VPS8-215ENST00000460158 SLC24A3Q9HC58 644 aa7.48□□□□□ -1.21
VPS8-215ENST00000460158 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.48□□□□□ -1.21
VPS8-215ENST00000460158 GFRA3O60609 400 aa7.47□□□□□ -1.21
VPS8-215ENST00000460158 PRR14Q9BWN1 585 aa7.47□□□□□ -1.21
VPS8-215ENST00000460158 FCHSD2O94868 740 aa7.46□□□□□ -1.22
VPS8-215ENST00000460158 GGCXP38435 758 aa7.46□□□□□ -1.22
VPS8-215ENST00000460158 PTGDRQ13258 359 aa7.46□□□□□ -1.22
VPS8-215ENST00000460158 NRG2O14511 850 aaPredicted RBP7.45□□□□□ -1.22
VPS8-215ENST00000460158 TMUB1Q9BVT8 246 aa7.45□□□□□ -1.22
VPS8-215ENST00000460158 GNPATO15228 680 aa7.44□□□□□ -1.22
VPS8-215ENST00000460158 FECHP22830 423 aa7.44□□□□□ -1.22
VPS8-215ENST00000460158 TRAF7Q6Q0C0 670 aa7.44□□□□□ -1.22
VPS8-215ENST00000460158 KRI1Q8N9T8 703 aaKnown RBP7.44□□□□□ -1.22
VPS8-215ENST00000460158 HIC1Q14526 733 aa7.43□□□□□ -1.22
VPS8-215ENST00000460158 NKX2-3Q8TAU0 364 aa7.43□□□□□ -1.22
VPS8-215ENST00000460158 ZPR1O75312 459 aa7.42□□□□□ -1.22
VPS8-215ENST00000460158 DNAJB2P25686 324 aa7.42□□□□□ -1.22
VPS8-215ENST00000460158 COPS2P61201 443 aa7.42□□□□□ -1.22
VPS8-215ENST00000460158 RBM46Q8TBY0 533 aaKnown RBP7.42□□□□□ -1.22
VPS8-215ENST00000460158 PCDHB3Q9Y5E6 796 aa7.41□□□□□ -1.22
VPS8-215ENST00000460158 LCE2BO14633 110 aa7.4□□□□□ -1.22
VPS8-215ENST00000460158 MAP2K5Q13163 448 aa7.4□□□□□ -1.22
VPS8-215ENST00000460158 AK7Q96M32 723 aa7.4□□□□□ -1.22
VPS8-215ENST00000460158 TMEM134Q9H6X4 195 aa7.4□□□□□ -1.22
VPS8-215ENST00000460158 MINK1Q8N4C8 1332 aaPredicted RBP7.4□□□□□ -1.22
VPS8-215ENST00000460158 IRF6O14896 467 aa7.39□□□□□ -1.23
VPS8-215ENST00000460158 ADGRG1Q9Y653 693 aa7.39□□□□□ -1.23
VPS8-215ENST00000460158 CCDC102AQ96A19 550 aa7.38□□□□□ -1.23
VPS8-215ENST00000460158 PDZRN3Q9UPQ7 1066 aa7.38□□□□□ -1.23
VPS8-215ENST00000460158 TRIM66O15016 1216 aa7.37□□□□□ -1.23
VPS8-215ENST00000460158 RCCD1A6NED2 376 aa7.36□□□□□ -1.23
VPS8-215ENST00000460158 ACTN4O43707 911 aaKnown RBP7.36□□□□□ -1.23
VPS8-215ENST00000460158 BRPF1P55201 1214 aaPredicted RBP7.36□□□□□ -1.23
VPS8-215ENST00000460158 KMT5BQ4FZB7 885 aa7.36□□□□□ -1.23
VPS8-215ENST00000460158 BLOC1S3Q6QNY0 202 aa7.36□□□□□ -1.23
VPS8-215ENST00000460158 RNF223E7ERA6 249 aa7.35□□□□□ -1.23
VPS8-215ENST00000460158 FAM161AQ3B820 660 aa7.35□□□□□ -1.23
VPS8-215ENST00000460158 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.34□□□□□ -1.23
VPS8-215ENST00000460158 NEUROD2Q15784 382 aa7.34□□□□□ -1.23
VPS8-215ENST00000460158 SLC19A1P41440 591 aa7.33□□□□□ -1.24
VPS8-215ENST00000460158 PDE4DQ08499 809 aa7.33□□□□□ -1.24
VPS8-215ENST00000460158 ANKLE1Q8NAG6 615 aa7.33□□□□□ -1.24
VPS8-215ENST00000460158 OATP04181 439 aa7.32□□□□□ -1.24
VPS8-215ENST00000460158 CFHP08603 1231 aa7.32□□□□□ -1.24
VPS8-215ENST00000460158 NR1I2O75469 434 aa7.31□□□□□ -1.24
VPS8-215ENST00000460158 PHOX2BQ99453 314 aa7.31□□□□□ -1.24
VPS8-215ENST00000460158 GPBP1L1Q9HC44 474 aaPredicted RBP7.31□□□□□ -1.24
VPS8-215ENST00000460158 TLL1O43897 1013 aa7.3□□□□□ -1.24
VPS8-215ENST00000460158 SLC10A3P09131 477 aa7.3□□□□□ -1.24
VPS8-215ENST00000460158 AMHR2Q16671 573 aa7.3□□□□□ -1.24
VPS8-215ENST00000460158 RSPH4AQ5TD94 716 aa7.3□□□□□ -1.24
VPS8-215ENST00000460158 SPRYD7Q5W111 196 aa7.3□□□□□ -1.24
VPS8-215ENST00000460158 PXYLP1Q8TE99 480 aa7.3□□□□□ -1.24
VPS8-215ENST00000460158 ADH1BP00325 375 aa7.29□□□□□ -1.24
VPS8-215ENST00000460158 PRR20EP86478 221 aa7.29□□□□□ -1.24
VPS8-215ENST00000460158 PRR20CP86479 221 aa7.29□□□□□ -1.24
VPS8-215ENST00000460158 PRR20DP86480 221 aa7.29□□□□□ -1.24
VPS8-215ENST00000460158 PRR20BP86481 221 aa7.29□□□□□ -1.24
VPS8-215ENST00000460158 PRR20AP86496 221 aa7.29□□□□□ -1.24
VPS8-215ENST00000460158 TRIM67Q6ZTA4 783 aa7.29□□□□□ -1.24
VPS8-215ENST00000460158 METTL3Q86U44 580 aaKnown RBP7.29□□□□□ -1.24
VPS8-215ENST00000460158 ZNF598Q86UK7 904 aaKnown RBP7.29□□□□□ -1.24
VPS8-215ENST00000460158 EMID1Q96A84 441 aaPredicted RBP7.29□□□□□ -1.24
VPS8-215ENST00000460158 S1PR4O95977 384 aa7.28□□□□□ -1.24
VPS8-215ENST00000460158 ZNF787Q6DD87 383 aa7.28□□□□□ -1.24
VPS8-215ENST00000460158 PARP9Q8IXQ6 854 aa7.27□□□□□ -1.25
VPS8-215ENST00000460158 NLRP7Q8WX94 980 aa7.27□□□□□ -1.25
VPS8-215ENST00000460158 KDM4CQ9H3R0 1056 aa7.27□□□□□ -1.25
VPS8-215ENST00000460158 DGAT1O75907 488 aa7.26□□□□□ -1.25
VPS8-215ENST00000460158 TTLL12Q14166 644 aaPredicted RBP7.26□□□□□ -1.25
VPS8-215ENST00000460158 SCUBE3Q8IX30 993 aa7.26□□□□□ -1.25
VPS8-215ENST00000460158 REPIN1Q9BWE0 567 aaKnown RBP7.26□□□□□ -1.25
VPS8-215ENST00000460158 SLC6A16Q9GZN6 736 aa7.26□□□□□ -1.25
VPS8-215ENST00000460158 PPEF1O14829 653 aaPredicted RBP7.25□□□□□ -1.25
VPS8-215ENST00000460158 MDM2Q00987 491 aaPredicted RBP7.25□□□□□ -1.25
VPS8-215ENST00000460158 PKDCCQ504Y2 493 aa7.25□□□□□ -1.25
VPS8-215ENST00000460158 LIAT1Q6ZQX7 453 aa7.25□□□□□ -1.25
VPS8-215ENST00000460158 ZNF697Q5TEC3 545 aa7.24□□□□□ -1.25
VPS8-215ENST00000460158 GIGYF2Q6Y7W6 1299 aaKnown RBP7.23□□□□□ -1.25
VPS8-215ENST00000460158 DAXXQ9UER7 740 aaPredicted RBP7.23□□□□□ -1.25
VPS8-215ENST00000460158 GDF9O60383 454 aa7.22□□□□□ -1.25
VPS8-215ENST00000460158 CLCN1P35523 988 aa7.22□□□□□ -1.25
VPS8-215ENST00000460158 MYT1Q01538 1121 aa7.22□□□□□ -1.25
VPS8-215ENST00000460158 SPSB2Q99619 263 aa7.22□□□□□ -1.25
VPS8-215ENST00000460158 GPCPD1Q9NPB8 672 aa7.22□□□□□ -1.25
VPS8-215ENST00000460158 TMEM132AQ24JP5 1023 aa7.21□□□□□ -1.26
VPS8-215ENST00000460158 PUS10Q3MIT2 529 aaKnown RBP7.21□□□□□ -1.26
VPS8-215ENST00000460158 IL27Q8NEV9 243 aa7.21□□□□□ -1.26
VPS8-215ENST00000460158 FAM117AQ9C073 453 aa7.21□□□□□ -1.26
VPS8-215ENST00000460158 MS4A1P11836 297 aa7.2□□□□□ -1.26
VPS8-215ENST00000460158 PLA2G2CQ5R387 149 aa7.2□□□□□ -1.26
VPS8-215ENST00000460158 SSTR3P32745 418 aaPredicted RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms