RNA–Protein interactions for RNA: ENST00000459689.1

SUPT3H-204, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

TSL 2

Gene SUPT3H, Length 396 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-204ENST00000459689 SLF2Q8IX21 1173 aa11.58□□□□□ -0.56
SUPT3H-204ENST00000459689 ZC3H15Q8WU90 426 aaKnown RBP11.58□□□□□ -0.56
SUPT3H-204ENST00000459689 RNF40O75150 1001 aa11.57□□□□□ -0.56
SUPT3H-204ENST00000459689 APLP1P51693 650 aa11.57□□□□□ -0.56
SUPT3H-204ENST00000459689 IRF6O14896 467 aa11.56□□□□□ -0.56
SUPT3H-204ENST00000459689 ZMYND10O75800 440 aa11.56□□□□□ -0.56
SUPT3H-204ENST00000459689 SLC10A3P09131 477 aa11.55□□□□□ -0.56
SUPT3H-204ENST00000459689 HDGFP51858 240 aaKnown RBP11.55□□□□□ -0.56
SUPT3H-204ENST00000459689 IFFO2Q5TF58 517 aa11.55□□□□□ -0.56
SUPT3H-204ENST00000459689 CCDC102AQ96A19 550 aa11.55□□□□□ -0.56
SUPT3H-204ENST00000459689 MINK1Q8N4C8 1332 aaPredicted RBP11.54□□□□□ -0.56
SUPT3H-204ENST00000459689 BARGINQ6ZT62 677 aa11.53□□□□□ -0.56
SUPT3H-204ENST00000459689 TJAP1Q5JTD0 557 aa11.51□□□□□ -0.57
SUPT3H-204ENST00000459689 DAXXQ9UER7 740 aaPredicted RBP11.5□□□□□ -0.57
SUPT3H-204ENST00000459689 NECTIN2Q92692 538 aa11.49□□□□□ -0.57
SUPT3H-204ENST00000459689 BCANQ96GW7 911 aa11.49□□□□□ -0.57
SUPT3H-204ENST00000459689 MTRQ99707 1265 aa11.47□□□□□ -0.57
SUPT3H-204ENST00000459689 CFHP08603 1231 aa11.46□□□□□ -0.57
SUPT3H-204ENST00000459689 TMUB1Q9BVT8 246 aa11.46□□□□□ -0.57
SUPT3H-204ENST00000459689 ACTN4O43707 911 aaKnown RBP11.44□□□□□ -0.58
SUPT3H-204ENST00000459689 SLC4A3P48751 1232 aa11.44□□□□□ -0.58
SUPT3H-204ENST00000459689 A0A0G2JS52 829 aa11.43□□□□□ -0.58
SUPT3H-204ENST00000459689 KCNC4Q03721 635 aa11.43□□□□□ -0.58
SUPT3H-204ENST00000459689 REPIN1Q9BWE0 567 aaKnown RBP11.43□□□□□ -0.58
SUPT3H-204ENST00000459689 ZNF516Q92618 1163 aa11.42□□□□□ -0.58
SUPT3H-204ENST00000459689 DDX11L8A8MPP1 907 aa11.41□□□□□ -0.58
SUPT3H-204ENST00000459689 MDM2Q00987 491 aaPredicted RBP11.41□□□□□ -0.58
SUPT3H-204ENST00000459689 PRR14Q9BWN1 585 aa11.41□□□□□ -0.58
SUPT3H-204ENST00000459689 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
SUPT3H-204ENST00000459689 BLOC1S3Q6QNY0 202 aa11.4□□□□□ -0.58
SUPT3H-204ENST00000459689 CD46P15529 392 aa11.39□□□□□ -0.59
SUPT3H-204ENST00000459689 COPS2P61201 443 aa11.39□□□□□ -0.59
SUPT3H-204ENST00000459689 AMHR2Q16671 573 aa11.39□□□□□ -0.59
SUPT3H-204ENST00000459689 KMT5BQ4FZB7 885 aa11.39□□□□□ -0.59
SUPT3H-204ENST00000459689 PCDHB3Q9Y5E6 796 aa11.39□□□□□ -0.59
SUPT3H-204ENST00000459689 SULF1Q8IWU6 871 aa11.38□□□□□ -0.59
SUPT3H-204ENST00000459689 GCGRP47871 477 aa11.37□□□□□ -0.59
SUPT3H-204ENST00000459689 KRI1Q8N9T8 703 aaKnown RBP11.37□□□□□ -0.59
SUPT3H-204ENST00000459689 RDH13Q8NBN7 331 aa11.37□□□□□ -0.59
SUPT3H-204ENST00000459689 GPCPD1Q9NPB8 672 aa11.37□□□□□ -0.59
SUPT3H-204ENST00000459689 FAM217BQ9NTX9 383 aaPredicted RBP11.36□□□□□ -0.59
SUPT3H-204ENST00000459689 ZPR1O75312 459 aa11.35□□□□□ -0.59
SUPT3H-204ENST00000459689 CLCN1P35523 988 aa11.35□□□□□ -0.59
SUPT3H-204ENST00000459689 NKX2-3Q8TAU0 364 aa11.35□□□□□ -0.59
SUPT3H-204ENST00000459689 TRIM66O15016 1216 aa11.34□□□□□ -0.59
SUPT3H-204ENST00000459689 FUT2Q10981 343 aa11.34□□□□□ -0.59
SUPT3H-204ENST00000459689 TLL1O43897 1013 aa11.33□□□□□ -0.6
SUPT3H-204ENST00000459689 PUS10Q3MIT2 529 aaKnown RBP11.33□□□□□ -0.6
SUPT3H-204ENST00000459689 SLC24A3Q9HC58 644 aa11.33□□□□□ -0.6
SUPT3H-204ENST00000459689 RSPH4AQ5TD94 716 aa11.32□□□□□ -0.6
SUPT3H-204ENST00000459689 MORN1Q5T089 497 aa11.31□□□□□ -0.6
SUPT3H-204ENST00000459689 PARP9Q8IXQ6 854 aa11.31□□□□□ -0.6
SUPT3H-204ENST00000459689 AK7Q96M32 723 aa11.31□□□□□ -0.6
SUPT3H-204ENST00000459689 GIGYF2Q6Y7W6 1299 aaKnown RBP11.28□□□□□ -0.6
SUPT3H-204ENST00000459689 SCUBE3Q8IX30 993 aa11.28□□□□□ -0.6
SUPT3H-204ENST00000459689 ATP6V1AP38606 617 aa11.27□□□□□ -0.61
SUPT3H-204ENST00000459689 PPP1R18Q6NYC8 613 aa11.27□□□□□ -0.61
SUPT3H-204ENST00000459689 TTLL12Q14166 644 aaPredicted RBP11.26□□□□□ -0.61
SUPT3H-204ENST00000459689 THAP11Q96EK4 314 aa11.26□□□□□ -0.61
SUPT3H-204ENST00000459689 NR1I2O75469 434 aa11.25□□□□□ -0.61
SUPT3H-204ENST00000459689 SSTR3P32745 418 aaPredicted RBP11.25□□□□□ -0.61
SUPT3H-204ENST00000459689 SLC27A5Q9Y2P5 690 aa11.25□□□□□ -0.61
SUPT3H-204ENST00000459689 KDM4AO75164 1064 aa11.24□□□□□ -0.61
SUPT3H-204ENST00000459689 RGS20O76081 388 aa11.24□□□□□ -0.61
SUPT3H-204ENST00000459689 MS4A1P11836 297 aa11.24□□□□□ -0.61
SUPT3H-204ENST00000459689 PDE4DQ08499 809 aa11.24□□□□□ -0.61
SUPT3H-204ENST00000459689 HLA-CQ95604 372 aa11.24□□□□□ -0.61
SUPT3H-204ENST00000459689 ADH1BP00325 375 aa11.23□□□□□ -0.61
SUPT3H-204ENST00000459689 HOXA2O43364 376 aa11.22□□□□□ -0.61
SUPT3H-204ENST00000459689 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.21□□□□□ -0.61
SUPT3H-204ENST00000459689 RNF19BQ6ZMZ0 732 aa11.2□□□□□ -0.62
SUPT3H-204ENST00000459689 SALL2Q9Y467 1007 aaPredicted RBP11.2□□□□□ -0.62
SUPT3H-204ENST00000459689 S1PR4O95977 384 aa11.19□□□□□ -0.62
SUPT3H-204ENST00000459689 RNF223E7ERA6 249 aa11.18□□□□□ -0.62
SUPT3H-204ENST00000459689 USP46P62068 366 aa11.18□□□□□ -0.62
SUPT3H-204ENST00000459689 GUCA2AQ02747 115 aa11.18□□□□□ -0.62
SUPT3H-204ENST00000459689 BRICD5Q6PL45 260 aa11.18□□□□□ -0.62
SUPT3H-204ENST00000459689 SPIRE2Q8WWL2 714 aa11.18□□□□□ -0.62
SUPT3H-204ENST00000459689 SPSB2Q99619 263 aa11.18□□□□□ -0.62
SUPT3H-204ENST00000459689 EMID1Q96A84 441 aaPredicted RBP11.17□□□□□ -0.62
SUPT3H-204ENST00000459689 FAM160A2Q8N612 972 aaPredicted RBP11.16□□□□□ -0.62
SUPT3H-204ENST00000459689 BEGAINQ9BUH8 593 aa11.16□□□□□ -0.62
SUPT3H-204ENST00000459689 GRIPAP1Q4V328 841 aa11.15□□□□□ -0.62
SUPT3H-204ENST00000459689 PPEF1O14829 653 aaPredicted RBP11.14□□□□□ -0.63
SUPT3H-204ENST00000459689 SLC6A16Q9GZN6 736 aa11.14□□□□□ -0.63
SUPT3H-204ENST00000459689 PRDM9Q9NQV7 894 aa11.14□□□□□ -0.63
SUPT3H-204ENST00000459689 FMNL1O95466 1100 aaPredicted RBP11.13□□□□□ -0.63
SUPT3H-204ENST00000459689 PCDHGC3Q9UN70 934 aa11.13□□□□□ -0.63
SUPT3H-204ENST00000459689 MSS51Q4VC12 460 aa11.12□□□□□ -0.63
SUPT3H-204ENST00000459689 PLA2G2CQ5R387 149 aa11.12□□□□□ -0.63
SUPT3H-204ENST00000459689 MOXD2PA6NHM9 499 aa11.11□□□□□ -0.63
SUPT3H-204ENST00000459689 GGCXP38435 758 aa11.11□□□□□ -0.63
SUPT3H-204ENST00000459689 NUTM1Q86Y26 1132 aa11.11□□□□□ -0.63
SUPT3H-204ENST00000459689 ANKLE1Q8NAG6 615 aa11.11□□□□□ -0.63
SUPT3H-204ENST00000459689 NDUFV2P19404 249 aa11.1□□□□□ -0.63
SUPT3H-204ENST00000459689 TBC1D2Q9BYX2 928 aa11.1□□□□□ -0.63
SUPT3H-204ENST00000459689 Q3C1V9 767 aa11.09□□□□□ -0.63
SUPT3H-204ENST00000459689 PRKD2Q9BZL6 878 aa11.09□□□□□ -0.63
SUPT3H-204ENST00000459689 GPBP1L1Q9HC44 474 aaPredicted RBP11.09□□□□□ -0.63
SUPT3H-204ENST00000459689 FDX1P10109 184 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms