RNA–Protein interactions for RNA: ENST00000456991.5

TMEM56-203, Transcript of transmembrane protein 56, humanhuman

TSL 3

Gene TMEM56, Length 992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-203ENST00000456991 XIRP1Q702N8 1843 aaKnown RBP33.15■■■□□ 2.9
TMEM56-203ENST00000456991 PPP1R15AO75807 674 aaPredicted RBP33.13■■■□□ 2.89
TMEM56-203ENST00000456991 RGS17Q9UGC6 210 aaPredicted RBP33.13■■■□□ 2.89
TMEM56-203ENST00000456991 NKTRP30414 1462 aaKnown RBP33.1■■■□□ 2.89
TMEM56-203ENST00000456991 MSH6P52701 1360 aa33.09■■■□□ 2.89
TMEM56-203ENST00000456991 PLEKHG1Q9ULL1 1385 aa33.09■■■□□ 2.89
TMEM56-203ENST00000456991 ZFYVE9O95405 1425 aa33.08■■■□□ 2.89
TMEM56-203ENST00000456991 RIMS2Q9UQ26 1411 aa33.07■■■□□ 2.88
TMEM56-203ENST00000456991 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.06■■■□□ 2.88
TMEM56-203ENST00000456991 SLAIN2Q9P270 581 aa33.06■■■□□ 2.88
TMEM56-203ENST00000456991 CHGAP10645 457 aaKnown RBP33.05■■■□□ 2.88
TMEM56-203ENST00000456991 TBX22Q9Y458 520 aa33.04■■■□□ 2.88
TMEM56-203ENST00000456991 NWD1Q149M9 1564 aa33.03■■■□□ 2.88
TMEM56-203ENST00000456991 ROCK1Q13464 1354 aa32.98■■■□□ 2.87
TMEM56-203ENST00000456991 ROBO1Q9Y6N7 1651 aa32.97■■■□□ 2.87
TMEM56-203ENST00000456991 TMEM131LA2VDJ0 1609 aa32.95■■■□□ 2.87
TMEM56-203ENST00000456991 NUTM2DQ5VT03 806 aaPredicted RBP32.94■■■□□ 2.86
TMEM56-203ENST00000456991 POTEAQ6S8J7 498 aa32.93■■■□□ 2.86
TMEM56-203ENST00000456991 C14orf37Q86TY3 774 aa32.93■■■□□ 2.86
TMEM56-203ENST00000456991 NCOA3Q9Y6Q9 1424 aa32.93■■■□□ 2.86
TMEM56-203ENST00000456991 UNC13BO14795 1591 aa32.92■■■□□ 2.86
TMEM56-203ENST00000456991 NUP155O75694 1391 aa32.91■■■□□ 2.86
TMEM56-203ENST00000456991 JCADQ9P266 1359 aa32.89■■■□□ 2.86
TMEM56-203ENST00000456991 GCC2Q8IWJ2 1684 aa32.88■■■□□ 2.85
TMEM56-203ENST00000456991 ADAMTS13Q76LX8 1427 aa32.87■■■□□ 2.85
TMEM56-203ENST00000456991 PIK3R4Q99570 1358 aa32.87■■■□□ 2.85
TMEM56-203ENST00000456991 ITGAEP38570 1179 aa32.87■■■□□ 2.85
TMEM56-203ENST00000456991 C19orf44Q9H6X5 657 aa32.87■■■□□ 2.85
TMEM56-203ENST00000456991 CADPS2Q86UW7 1296 aa32.86■■■□□ 2.85
TMEM56-203ENST00000456991 CHD2O14647 1828 aaKnown RBP32.86■■■□□ 2.85
TMEM56-203ENST00000456991 ATF3P18847 181 aa32.84■■■□□ 2.85
TMEM56-203ENST00000456991 MYO5BQ9ULV0 1848 aa32.84■■■□□ 2.85
TMEM56-203ENST00000456991 E9PCH4 1651 aa32.82■■■□□ 2.84
TMEM56-203ENST00000456991 AMOTL2Q9Y2J4 779 aa32.8■■■□□ 2.84
TMEM56-203ENST00000456991 IQGAP3Q86VI3 1631 aa32.8■■■□□ 2.84
TMEM56-203ENST00000456991 DIP2AQ14689 1571 aa32.79■■■□□ 2.84
TMEM56-203ENST00000456991 PHLPP1O60346 1717 aa32.77■■■□□ 2.84
TMEM56-203ENST00000456991 SPATA31A6Q5VVP1 1343 aa32.75■■■□□ 2.83
TMEM56-203ENST00000456991 TRPM2O94759 1503 aa32.72■■■□□ 2.83
TMEM56-203ENST00000456991 PPARGC1BQ86YN6 1023 aaKnown RBP32.71■■■□□ 2.83
TMEM56-203ENST00000456991 ZNF326Q5BKZ1 582 aaKnown RBP32.7■■■□□ 2.83
TMEM56-203ENST00000456991 PTPRUQ92729 1446 aa32.69■■■□□ 2.82
TMEM56-203ENST00000456991 MEX3CQ5U5Q3 659 aaKnown RBP32.69■■■□□ 2.82
TMEM56-203ENST00000456991 COL16A1Q07092 1604 aaPredicted RBP32.68■■■□□ 2.82
TMEM56-203ENST00000456991 BRINP3Q76B58 766 aa32.67■■■□□ 2.82
TMEM56-203ENST00000456991 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.65■■■□□ 2.82
TMEM56-203ENST00000456991 ZNF772Q68DY9 489 aaPredicted RBP32.64■■■□□ 2.82
TMEM56-203ENST00000456991 AHDC1Q5TGY3 1603 aaPredicted RBP32.62■■■□□ 2.81
TMEM56-203ENST00000456991 DCCP43146 1447 aa32.61■■■□□ 2.81
TMEM56-203ENST00000456991 LRP6O75581 1613 aa32.59■■■□□ 2.81
TMEM56-203ENST00000456991 METP08581 1390 aa32.58■■■□□ 2.81
TMEM56-203ENST00000456991 SETBP1Q9Y6X0 1596 aa32.58■■■□□ 2.81
TMEM56-203ENST00000456991 NUTM2BA6NNL0 878 aaPredicted RBP32.53■■■□□ 2.8
TMEM56-203ENST00000456991 NUTM2EB1AL46 878 aaPredicted RBP32.53■■■□□ 2.8
TMEM56-203ENST00000456991 NUTM2AQ8IVF1 878 aaPredicted RBP32.53■■■□□ 2.8
TMEM56-203ENST00000456991 NRXN3Q9Y4C0 1643 aa32.51■■■□□ 2.8
TMEM56-203ENST00000456991 SPHKAPQ2M3C7 1700 aa32.51■■■□□ 2.79
TMEM56-203ENST00000456991 MST1RQ04912 1400 aa32.51■■■□□ 2.79
TMEM56-203ENST00000456991 LRRC59Q96AG4 307 aaKnown RBP32.5■■■□□ 2.79
TMEM56-203ENST00000456991 XRN1Q8IZH2 1706 aaKnown RBP32.49■■■□□ 2.79
TMEM56-203ENST00000456991 TRIM52Q96A61 297 aa32.49■■■□□ 2.79
TMEM56-203ENST00000456991 ASXL1Q8IXJ9 1541 aa32.48■■■□□ 2.79
TMEM56-203ENST00000456991 SHPRHQ149N8 1683 aa32.48■■■□□ 2.79
TMEM56-203ENST00000456991 RXRBP28702 533 aa32.48■■■□□ 2.79
TMEM56-203ENST00000456991 SETD5Q9C0A6 1442 aa32.48■■■□□ 2.79
TMEM56-203ENST00000456991 ADGRL3Q9HAR2 1447 aa32.45■■■□□ 2.79
TMEM56-203ENST00000456991 VGFO15240 615 aaPredicted RBP32.45■■■□□ 2.79
TMEM56-203ENST00000456991 NAIPQ13075 1403 aa32.44■■■□□ 2.78
TMEM56-203ENST00000456991 RRBP1Q9P2E9 1410 aaKnown RBP32.43■■■□□ 2.78
TMEM56-203ENST00000456991 NEXMIFQ5QGS0 1516 aa32.42■■■□□ 2.78
TMEM56-203ENST00000456991 UPF1Q92900 1129 aaKnown RBP eCLIP32.41■■■□□ 2.78
TMEM56-203ENST00000456991 CLTCL1P53675 1640 aa32.4■■■□□ 2.78
TMEM56-203ENST00000456991 SETD1AO15047 1707 aaKnown RBP32.4■■■□□ 2.78
TMEM56-203ENST00000456991 DDX17Q92841 729 aaKnown RBP32.4■■■□□ 2.78
TMEM56-203ENST00000456991 AFF2P51816 1311 aa32.39■■■□□ 2.78
TMEM56-203ENST00000456991 RPGRIP1LQ68CZ1 1315 aa32.37■■■□□ 2.77
TMEM56-203ENST00000456991 SLC4A1APQ9BWU0 796 aaKnown RBP32.35■■■□□ 2.77
TMEM56-203ENST00000456991 C8orf37Q96NL8 207 aa32.34■■■□□ 2.77
TMEM56-203ENST00000456991 PNPLA6Q8IY17 1366 aa32.32■■■□□ 2.77
TMEM56-203ENST00000456991 C1orf167Q5SNV9 1468 aa32.32■■■□□ 2.76
TMEM56-203ENST00000456991 NHSL1Q5SYE7 1610 aa32.32■■■□□ 2.76
TMEM56-203ENST00000456991 PTCH1Q13635 1447 aa32.32■■■□□ 2.76
TMEM56-203ENST00000456991 CDK12Q9NYV4 1490 aaPredicted RBP32.31■■■□□ 2.76
TMEM56-203ENST00000456991 ROBO2Q9HCK4 1378 aa32.31■■■□□ 2.76
TMEM56-203ENST00000456991 QTRT2Q9H974 415 aaKnown RBP32.3■■■□□ 2.76
TMEM56-203ENST00000456991 HFM1A2PYH4 1435 aa32.28■■■□□ 2.76
TMEM56-203ENST00000456991 ORAI2Q96SN7 254 aa32.27■■■□□ 2.76
TMEM56-203ENST00000456991 KIF1BO60333 1816 aa32.26■■■□□ 2.76
TMEM56-203ENST00000456991 RBM6P78332 1123 aaKnown RBP32.26■■■□□ 2.75
TMEM56-203ENST00000456991 NGLY1Q96IV0 654 aa32.25■■■□□ 2.75
TMEM56-203ENST00000456991 SOS2Q07890 1332 aaPredicted RBP32.25■■■□□ 2.75
TMEM56-203ENST00000456991 NALCNQ8IZF0 1738 aa32.24■■■□□ 2.75
TMEM56-203ENST00000456991 ADAMTS2O95450 1211 aa32.24■■■□□ 2.75
TMEM56-203ENST00000456991 PRAG1Q86YV5 1406 aa32.22■■■□□ 2.75
TMEM56-203ENST00000456991 FOXD1Q16676 465 aa32.16■■■□□ 2.74
TMEM56-203ENST00000456991 ESCO1Q5FWF5 840 aa32.14■■■□□ 2.74
TMEM56-203ENST00000456991 RGS12O14924 1447 aa32.13■■■□□ 2.73
TMEM56-203ENST00000456991 LAMC1P11047 1609 aa32.12■■■□□ 2.73
TMEM56-203ENST00000456991 USP21Q9UK80 565 aa32.12■■■□□ 2.73
TMEM56-203ENST00000456991 NPHP3Q7Z494 1330 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms