RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 MSH6P52701 1360 aa20.99■□□□□ 0.95
EPCAM-204ENST00000456133 BCANQ96GW7 911 aa20.99■□□□□ 0.95
EPCAM-204ENST00000456133 ANKRD30AQ9BXX3 1397 aa20.99■□□□□ 0.95
EPCAM-204ENST00000456133 SLAIN2Q9P270 581 aa20.97■□□□□ 0.95
EPCAM-204ENST00000456133 FGD6Q6ZV73 1430 aa20.97■□□□□ 0.95
EPCAM-204ENST00000456133 GCC2Q8IWJ2 1684 aa20.96■□□□□ 0.95
EPCAM-204ENST00000456133 JCADQ9P266 1359 aa20.95■□□□□ 0.94
EPCAM-204ENST00000456133 SLC52A1Q9NWF4 448 aa20.94■□□□□ 0.94
EPCAM-204ENST00000456133 COL16A1Q07092 1604 aaPredicted RBP20.94■□□□□ 0.94
EPCAM-204ENST00000456133 ZFYVE9O95405 1425 aa20.92■□□□□ 0.94
EPCAM-204ENST00000456133 APLP2Q06481 763 aa20.91■□□□□ 0.94
EPCAM-204ENST00000456133 PLEKHG1Q9ULL1 1385 aa20.91■□□□□ 0.94
EPCAM-204ENST00000456133 TMEM131LA2VDJ0 1609 aa20.9■□□□□ 0.94
EPCAM-204ENST00000456133 RIMS2Q9UQ26 1411 aa20.89■□□□□ 0.94
EPCAM-204ENST00000456133 RPRD2Q5VT52 1461 aaKnown RBP20.89■□□□□ 0.93
EPCAM-204ENST00000456133 ADGRL2O95490 1459 aa20.88■□□□□ 0.93
EPCAM-204ENST00000456133 PPP1R15AO75807 674 aaPredicted RBP20.88■□□□□ 0.93
EPCAM-204ENST00000456133 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.87■□□□□ 0.93
EPCAM-204ENST00000456133 LRP6O75581 1613 aa20.87■□□□□ 0.93
EPCAM-204ENST00000456133 SHPRHQ149N8 1683 aa20.85■□□□□ 0.93
EPCAM-204ENST00000456133 HDGFP51858 240 aaKnown RBP20.84■□□□□ 0.93
EPCAM-204ENST00000456133 C14orf37Q86TY3 774 aa20.84■□□□□ 0.93
EPCAM-204ENST00000456133 TBX22Q9Y458 520 aa20.84■□□□□ 0.93
EPCAM-204ENST00000456133 MEX3CQ5U5Q3 659 aaKnown RBP20.83■□□□□ 0.93
EPCAM-204ENST00000456133 NCOA3Q9Y6Q9 1424 aa20.83■□□□□ 0.93
EPCAM-204ENST00000456133 SPATA31A6Q5VVP1 1343 aa20.83■□□□□ 0.92
EPCAM-204ENST00000456133 AHDC1Q5TGY3 1603 aaPredicted RBP20.83■□□□□ 0.92
EPCAM-204ENST00000456133 ANKRD50Q9ULJ7 1429 aa20.83■□□□□ 0.92
EPCAM-204ENST00000456133 CHGAP10645 457 aaKnown RBP20.82■□□□□ 0.92
EPCAM-204ENST00000456133 TRIM52Q96A61 297 aa20.81■□□□□ 0.92
EPCAM-204ENST00000456133 ADAMTS13Q76LX8 1427 aa20.8■□□□□ 0.92
EPCAM-204ENST00000456133 NUTM2DQ5VT03 806 aaPredicted RBP20.8■□□□□ 0.92
EPCAM-204ENST00000456133 E9PCH4 1651 aa20.8■□□□□ 0.92
EPCAM-204ENST00000456133 ZNF772Q68DY9 489 aaPredicted RBP20.79■□□□□ 0.92
EPCAM-204ENST00000456133 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.79■□□□□ 0.92
EPCAM-204ENST00000456133 UPF1Q92900 1129 aaKnown RBP eCLIP20.79■□□□□ 0.92
EPCAM-204ENST00000456133 DIP2AQ14689 1571 aa20.79■□□□□ 0.92
EPCAM-204ENST00000456133 FAM50AQ14320 339 aaKnown RBP20.78■□□□□ 0.92
EPCAM-204ENST00000456133 CADPS2Q86UW7 1296 aa20.78■□□□□ 0.92
EPCAM-204ENST00000456133 UNC13BO14795 1591 aa20.78■□□□□ 0.92
EPCAM-204ENST00000456133 ATF3P18847 181 aa20.78■□□□□ 0.92
EPCAM-204ENST00000456133 C19orf44Q9H6X5 657 aa20.78■□□□□ 0.92
EPCAM-204ENST00000456133 PIK3R4Q99570 1358 aa20.75■□□□□ 0.91
EPCAM-204ENST00000456133 TRPM2O94759 1503 aa20.74■□□□□ 0.91
EPCAM-204ENST00000456133 NUTM2BA6NNL0 878 aaPredicted RBP20.73■□□□□ 0.91
EPCAM-204ENST00000456133 NUTM2EB1AL46 878 aaPredicted RBP20.73■□□□□ 0.91
EPCAM-204ENST00000456133 NUTM2AQ8IVF1 878 aaPredicted RBP20.73■□□□□ 0.91
EPCAM-204ENST00000456133 PTPRUQ92729 1446 aa20.72■□□□□ 0.91
EPCAM-204ENST00000456133 RXRBP28702 533 aa20.72■□□□□ 0.91
EPCAM-204ENST00000456133 BRINP3Q76B58 766 aa20.72■□□□□ 0.91
EPCAM-204ENST00000456133 AMOTL2Q9Y2J4 779 aa20.72■□□□□ 0.91
EPCAM-204ENST00000456133 IQGAP3Q86VI3 1631 aa20.7■□□□□ 0.9
EPCAM-204ENST00000456133 NHSL1Q5SYE7 1610 aa20.69■□□□□ 0.9
EPCAM-204ENST00000456133 XRN1Q8IZH2 1706 aaKnown RBP20.68■□□□□ 0.9
EPCAM-204ENST00000456133 ASXL1Q8IXJ9 1541 aa20.68■□□□□ 0.9
EPCAM-204ENST00000456133 NRXN3Q9Y4C0 1643 aa20.67■□□□□ 0.9
EPCAM-204ENST00000456133 CDK12Q9NYV4 1490 aaPredicted RBP20.67■□□□□ 0.9
EPCAM-204ENST00000456133 AFF2P51816 1311 aa20.67■□□□□ 0.9
EPCAM-204ENST00000456133 DCCP43146 1447 aa20.65■□□□□ 0.9
EPCAM-204ENST00000456133 SETD5Q9C0A6 1442 aa20.64■□□□□ 0.89
EPCAM-204ENST00000456133 MST1RQ04912 1400 aa20.63■□□□□ 0.89
EPCAM-204ENST00000456133 SETBP1Q9Y6X0 1596 aa20.62■□□□□ 0.89
EPCAM-204ENST00000456133 SPHKAPQ2M3C7 1700 aa20.61■□□□□ 0.89
EPCAM-204ENST00000456133 NUP155O75694 1391 aa20.6■□□□□ 0.89
EPCAM-204ENST00000456133 LRRC59Q96AG4 307 aaKnown RBP20.59■□□□□ 0.89
EPCAM-204ENST00000456133 ROCK1Q13464 1354 aa20.59■□□□□ 0.89
EPCAM-204ENST00000456133 NALCNQ8IZF0 1738 aa20.59■□□□□ 0.89
EPCAM-204ENST00000456133 DDX17Q92841 729 aaKnown RBP20.58■□□□□ 0.89
EPCAM-204ENST00000456133 RGS12O14924 1447 aa20.58■□□□□ 0.88
EPCAM-204ENST00000456133 C8orf37Q96NL8 207 aa20.58■□□□□ 0.88
EPCAM-204ENST00000456133 METP08581 1390 aa20.57■□□□□ 0.88
EPCAM-204ENST00000456133 QTRT2Q9H974 415 aaKnown RBP20.57■□□□□ 0.88
EPCAM-204ENST00000456133 PNPLA6Q8IY17 1366 aa20.56■□□□□ 0.88
EPCAM-204ENST00000456133 RBM6P78332 1123 aaKnown RBP20.56■□□□□ 0.88
EPCAM-204ENST00000456133 ZNF326Q5BKZ1 582 aaKnown RBP20.55■□□□□ 0.88
EPCAM-204ENST00000456133 ADGRL3Q9HAR2 1447 aa20.55■□□□□ 0.88
EPCAM-204ENST00000456133 ITGAEP38570 1179 aa20.51■□□□□ 0.87
EPCAM-204ENST00000456133 KIF1BO60333 1816 aa20.5■□□□□ 0.87
EPCAM-204ENST00000456133 ADAMTS2O95450 1211 aa20.5■□□□□ 0.87
EPCAM-204ENST00000456133 NEXMIFQ5QGS0 1516 aa20.49■□□□□ 0.87
EPCAM-204ENST00000456133 LAMC1P11047 1609 aa20.49■□□□□ 0.87
EPCAM-204ENST00000456133 CLTCL1P53675 1640 aa20.49■□□□□ 0.87
EPCAM-204ENST00000456133 NGLY1Q96IV0 654 aa20.49■□□□□ 0.87
EPCAM-204ENST00000456133 C1orf167Q5SNV9 1468 aa20.48■□□□□ 0.87
EPCAM-204ENST00000456133 ATAD2Q6PL18 1390 aa20.43■□□□□ 0.86
EPCAM-204ENST00000456133 ORAI2Q96SN7 254 aa20.43■□□□□ 0.86
EPCAM-204ENST00000456133 USP21Q9UK80 565 aa20.43■□□□□ 0.86
EPCAM-204ENST00000456133 SRCAPQ6ZRS2 3230 aa20.42■□□□□ 0.86
EPCAM-204ENST00000456133 SOS2Q07890 1332 aaPredicted RBP20.42■□□□□ 0.86
EPCAM-204ENST00000456133 COL22A1Q8NFW1 1626 aaPredicted RBP20.4■□□□□ 0.86
EPCAM-204ENST00000456133 TRPC5Q9UL62 973 aaPredicted RBP20.4■□□□□ 0.86
EPCAM-204ENST00000456133 PTCH1Q13635 1447 aa20.4■□□□□ 0.86
EPCAM-204ENST00000456133 ROBO2Q9HCK4 1378 aa20.4■□□□□ 0.86
EPCAM-204ENST00000456133 MARF1Q9Y4F3 1742 aaKnown RBP20.39■□□□□ 0.86
EPCAM-204ENST00000456133 FNBP4Q8N3X1 1017 aaPredicted RBP20.37■□□□□ 0.85
EPCAM-204ENST00000456133 ATRNO75882 1429 aa20.37■□□□□ 0.85
EPCAM-204ENST00000456133 EP400Q96L91 3159 aa20.36■□□□□ 0.85
EPCAM-204ENST00000456133 PPLO60437 1756 aa20.34■□□□□ 0.85
EPCAM-204ENST00000456133 VGFO15240 615 aaPredicted RBP20.33■□□□□ 0.85
EPCAM-204ENST00000456133 PPARGC1BQ86YN6 1023 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 241.4 ms