RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 NPDC1Q9NQX5 325 aaPredicted RBP12.14□□□□□ -0.47
CUL3-208ENST00000454323 ANKLE1Q8NAG6 615 aa12.13□□□□□ -0.47
CUL3-208ENST00000454323 PRR20EP86478 221 aa12.12□□□□□ -0.47
CUL3-208ENST00000454323 PRR20CP86479 221 aa12.12□□□□□ -0.47
CUL3-208ENST00000454323 PRR20DP86480 221 aa12.12□□□□□ -0.47
CUL3-208ENST00000454323 PRR20BP86481 221 aa12.12□□□□□ -0.47
CUL3-208ENST00000454323 PRR20AP86496 221 aa12.12□□□□□ -0.47
CUL3-208ENST00000454323 CFAP44Q96MT7 982 aa12.12□□□□□ -0.47
CUL3-208ENST00000454323 RNF223E7ERA6 249 aa12.11□□□□□ -0.47
CUL3-208ENST00000454323 ZNF598Q86UK7 904 aaKnown RBP12.11□□□□□ -0.47
CUL3-208ENST00000454323 BLOC1S3Q6QNY0 202 aa12.1□□□□□ -0.47
CUL3-208ENST00000454323 PAXIP1Q6ZW49 1069 aaPredicted RBP12.1□□□□□ -0.47
CUL3-208ENST00000454323 SPRYD7Q5W111 196 aa12.09□□□□□ -0.47
CUL3-208ENST00000454323 ACTN4O43707 911 aaKnown RBP12.07□□□□□ -0.48
CUL3-208ENST00000454323 NR1I2O75469 434 aa12.06□□□□□ -0.48
CUL3-208ENST00000454323 ZNF775Q96BV0 537 aaPredicted RBP12.06□□□□□ -0.48
CUL3-208ENST00000454323 TMEM134Q9H6X4 195 aa12.06□□□□□ -0.48
CUL3-208ENST00000454323 ARHGEF1Q92888 912 aaKnown RBP12.05□□□□□ -0.48
CUL3-208ENST00000454323 RSPH4AQ5TD94 716 aa12.04□□□□□ -0.48
CUL3-208ENST00000454323 ADH1BP00325 375 aa12.03□□□□□ -0.48
CUL3-208ENST00000454323 ZNF697Q5TEC3 545 aa12.03□□□□□ -0.48
CUL3-208ENST00000454323 TRIM67Q6ZTA4 783 aa12.03□□□□□ -0.48
CUL3-208ENST00000454323 MYT1Q01538 1121 aa12.02□□□□□ -0.49
CUL3-208ENST00000454323 PTGDRQ13258 359 aa12.02□□□□□ -0.49
CUL3-208ENST00000454323 LMOD2Q6P5Q4 547 aa12.02□□□□□ -0.49
CUL3-208ENST00000454323 CFHP08603 1231 aa12.01□□□□□ -0.49
CUL3-208ENST00000454323 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12□□□□□ -0.49
CUL3-208ENST00000454323 TLL1O43897 1013 aa12□□□□□ -0.49
CUL3-208ENST00000454323 S1PR4O95977 384 aa12□□□□□ -0.49
CUL3-208ENST00000454323 FAM187AA6NFU0 413 aa11.99□□□□□ -0.49
CUL3-208ENST00000454323 ADGRG1Q9Y653 693 aa11.99□□□□□ -0.49
CUL3-208ENST00000454323 RCCD1A6NED2 376 aa11.98□□□□□ -0.49
CUL3-208ENST00000454323 SLC6A16Q9GZN6 736 aa11.98□□□□□ -0.49
CUL3-208ENST00000454323 GDF9O60383 454 aa11.94□□□□□ -0.5
CUL3-208ENST00000454323 OATP04181 439 aa11.94□□□□□ -0.5
CUL3-208ENST00000454323 NUTM2FA1L443 756 aa11.93□□□□□ -0.5
CUL3-208ENST00000454323 FCHSD2O94868 740 aa11.93□□□□□ -0.5
CUL3-208ENST00000454323 LIAT1Q6ZQX7 453 aa11.93□□□□□ -0.5
CUL3-208ENST00000454323 EMID1Q96A84 441 aaPredicted RBP11.93□□□□□ -0.5
CUL3-208ENST00000454323 MLLT3P42568 568 aaPredicted RBP11.92□□□□□ -0.5
CUL3-208ENST00000454323 TNFRSF10AO00220 468 aa11.91□□□□□ -0.5
CUL3-208ENST00000454323 PPEF1O14829 653 aaPredicted RBP11.91□□□□□ -0.5
CUL3-208ENST00000454323 P3H3Q8IVL6 736 aa11.9□□□□□ -0.5
CUL3-208ENST00000454323 RPIAP49247 311 aa11.88□□□□□ -0.51
CUL3-208ENST00000454323 SPSB2Q99619 263 aa11.88□□□□□ -0.51
CUL3-208ENST00000454323 SCUBE3Q8IX30 993 aa11.87□□□□□ -0.51
CUL3-208ENST00000454323 CD2BP2O95400 341 aaKnown RBP11.85□□□□□ -0.51
CUL3-208ENST00000454323 SLC10A3P09131 477 aa11.85□□□□□ -0.51
CUL3-208ENST00000454323 CRIPAKQ8N1N5 446 aa11.85□□□□□ -0.51
CUL3-208ENST00000454323 KCNV2Q8TDN2 545 aa11.85□□□□□ -0.51
CUL3-208ENST00000454323 TREML4Q6UXN2 200 aa11.84□□□□□ -0.51
CUL3-208ENST00000454323 PXYLP1Q8TE99 480 aa11.84□□□□□ -0.51
CUL3-208ENST00000454323 AAASQ9NRG9 546 aa11.84□□□□□ -0.51
CUL3-208ENST00000454323 CTC1Q2NKJ3 1217 aa11.83□□□□□ -0.52
CUL3-208ENST00000454323 FOXC1Q12948 553 aa11.81□□□□□ -0.52
CUL3-208ENST00000454323 HIC1Q14526 733 aa11.81□□□□□ -0.52
CUL3-208ENST00000454323 CYP4X1Q8N118 509 aa11.8□□□□□ -0.52
CUL3-208ENST00000454323 POTECB2RU33 542 aa11.79□□□□□ -0.52
CUL3-208ENST00000454323 FAM161AQ3B820 660 aa11.79□□□□□ -0.52
CUL3-208ENST00000454323 PLA2G2CQ5R387 149 aa11.79□□□□□ -0.52
CUL3-208ENST00000454323 ST8SIA5O15466 376 aa11.78□□□□□ -0.52
CUL3-208ENST00000454323 AVPP01185 164 aa11.78□□□□□ -0.52
CUL3-208ENST00000454323 PKD2L1Q9P0L9 805 aa11.78□□□□□ -0.52
CUL3-208ENST00000454323 AXIN1O15169 862 aa11.77□□□□□ -0.53
CUL3-208ENST00000454323 FMNL1O95466 1100 aaPredicted RBP11.77□□□□□ -0.53
CUL3-208ENST00000454323 SMYD5Q6GMV2 418 aa11.77□□□□□ -0.53
CUL3-208ENST00000454323 METTL3Q86U44 580 aaKnown RBP11.77□□□□□ -0.53
CUL3-208ENST00000454323 RDH13Q8NBN7 331 aa11.77□□□□□ -0.53
CUL3-208ENST00000454323 ZBTB24O43167 697 aaPredicted RBP11.76□□□□□ -0.53
CUL3-208ENST00000454323 PUS10Q3MIT2 529 aaKnown RBP11.76□□□□□ -0.53
CUL3-208ENST00000454323 SULF1Q8IWU6 871 aa11.76□□□□□ -0.53
CUL3-208ENST00000454323 DAXXQ9UER7 740 aaPredicted RBP11.76□□□□□ -0.53
CUL3-208ENST00000454323 ATP6V1AP38606 617 aa11.75□□□□□ -0.53
CUL3-208ENST00000454323 FCF1Q9Y324 198 aaKnown RBP11.75□□□□□ -0.53
CUL3-208ENST00000454323 SALL2Q9Y467 1007 aaPredicted RBP11.75□□□□□ -0.53
CUL3-208ENST00000454323 SMCPP49901 116 aaPredicted RBP11.74□□□□□ -0.53
CUL3-208ENST00000454323 TOR4AQ9NXH8 423 aa11.74□□□□□ -0.53
CUL3-208ENST00000454323 GRIPAP1Q4V328 841 aa11.73□□□□□ -0.53
CUL3-208ENST00000454323 MORN1Q5T089 497 aa11.73□□□□□ -0.53
CUL3-208ENST00000454323 C11orf95C9JLR9 678 aaPredicted RBP11.72□□□□□ -0.53
CUL3-208ENST00000454323 WFS1O76024 890 aa11.71□□□□□ -0.53
CUL3-208ENST00000454323 TTC24A2A3L6 582 aaPredicted RBP11.7□□□□□ -0.54
CUL3-208ENST00000454323 DDX11L8A8MPP1 907 aa11.68□□□□□ -0.54
CUL3-208ENST00000454323 GNPATO15228 680 aa11.68□□□□□ -0.54
CUL3-208ENST00000454323 INSM1Q01101 510 aaPredicted RBP11.68□□□□□ -0.54
CUL3-208ENST00000454323 FUT2Q10981 343 aa11.68□□□□□ -0.54
CUL3-208ENST00000454323 MSS51Q4VC12 460 aa11.68□□□□□ -0.54
CUL3-208ENST00000454323 LCE2AQ5TA79 106 aaPredicted RBP11.68□□□□□ -0.54
CUL3-208ENST00000454323 THAP11Q96EK4 314 aa11.68□□□□□ -0.54
CUL3-208ENST00000454323 TSHZ2Q9NRE2 1034 aa11.68□□□□□ -0.54
CUL3-208ENST00000454323 STK17AQ9UEE5 414 aa11.68□□□□□ -0.54
CUL3-208ENST00000454323 SEMA3EO15041 775 aa11.65□□□□□ -0.54
CUL3-208ENST00000454323 GCGRP47871 477 aa11.65□□□□□ -0.54
CUL3-208ENST00000454323 Q3C1V9 767 aa11.65□□□□□ -0.54
CUL3-208ENST00000454323 SENP2Q9HC62 589 aa11.65□□□□□ -0.54
CUL3-208ENST00000454323 GMPR2Q9P2T1 348 aaKnown RBP11.65□□□□□ -0.54
CUL3-208ENST00000454323 REPIN1Q9BWE0 567 aaKnown RBP11.64□□□□□ -0.55
CUL3-208ENST00000454323 SLC27A5Q9Y2P5 690 aa11.64□□□□□ -0.55
CUL3-208ENST00000454323 WNT7AO00755 349 aa11.63□□□□□ -0.55
CUL3-208ENST00000454323 SNIP1Q8TAD8 396 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms