RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 MYOM2P54296 1465 aa22.32■■□□□ 1.16
SNX17-204ENST00000453453 KDM5AP29375 1690 aaKnown RBP22.32■■□□□ 1.16
SNX17-204ENST00000453453 NLRP1Q9C000 1473 aa22.31■■□□□ 1.16
SNX17-204ENST00000453453 PLPPR3Q6T4P5 718 aa22.3■■□□□ 1.16
SNX17-204ENST00000453453 RALGAPBQ86X10 1494 aa22.29■■□□□ 1.16
SNX17-204ENST00000453453 TRPM1Q7Z4N2 1603 aa22.29■■□□□ 1.16
SNX17-204ENST00000453453 NEXMIFQ5QGS0 1516 aa22.27■■□□□ 1.16
SNX17-204ENST00000453453 YTHDC1Q96MU7 727 aaKnown RBP22.27■■□□□ 1.16
SNX17-204ENST00000453453 MYO3AQ8NEV4 1616 aa22.25■■□□□ 1.15
SNX17-204ENST00000453453 A2ML1A8K2U0 1454 aa22.25■■□□□ 1.15
SNX17-204ENST00000453453 UBR1Q8IWV7 1749 aa22.25■■□□□ 1.15
SNX17-204ENST00000453453 KIAA1210Q9ULL0 1709 aa22.24■■□□□ 1.15
SNX17-204ENST00000453453 VGFO15240 615 aaPredicted RBP22.23■■□□□ 1.15
SNX17-204ENST00000453453 PTPRMP28827 1452 aa22.22■■□□□ 1.15
SNX17-204ENST00000453453 NRXN1Q9ULB1 1477 aa22.22■■□□□ 1.15
SNX17-204ENST00000453453 ROCK2O75116 1388 aaKnown RBP22.21■■□□□ 1.15
SNX17-204ENST00000453453 SETD1BQ9UPS6 1966 aaKnown RBP22.21■■□□□ 1.15
SNX17-204ENST00000453453 ZFYVE9O95405 1425 aa22.21■■□□□ 1.15
SNX17-204ENST00000453453 LAMC1P11047 1609 aa22.2■■□□□ 1.14
SNX17-204ENST00000453453 ADGRF5Q8IZF2 1346 aa22.19■■□□□ 1.14
SNX17-204ENST00000453453 RIMS2Q9UQ26 1411 aa22.18■■□□□ 1.14
SNX17-204ENST00000453453 HDGFP51858 240 aaKnown RBP22.18■■□□□ 1.14
SNX17-204ENST00000453453 EIF4G2P78344 907 aaKnown RBP eCLIP22.18■■□□□ 1.14
SNX17-204ENST00000453453 CEP170BQ9Y4F5 1589 aaPredicted RBP22.17■■□□□ 1.14
SNX17-204ENST00000453453 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.17■■□□□ 1.14
SNX17-204ENST00000453453 CARD11Q9BXL7 1154 aa22.17■■□□□ 1.14
SNX17-204ENST00000453453 ZNF142P52746 1687 aaPredicted RBP22.17■■□□□ 1.14
SNX17-204ENST00000453453 PIK3C2GO75747 1445 aa22.16■■□□□ 1.14
SNX17-204ENST00000453453 GPRASP1Q5JY77 1395 aa22.15■■□□□ 1.14
SNX17-204ENST00000453453 TMEM2Q9UHN6 1383 aa22.13■■□□□ 1.13
SNX17-204ENST00000453453 NUTM2DQ5VT03 806 aaPredicted RBP22.13■■□□□ 1.13
SNX17-204ENST00000453453 THEMISQ8N1K5 641 aaPredicted RBP22.13■■□□□ 1.13
SNX17-204ENST00000453453 USP47Q96K76 1375 aa22.12■■□□□ 1.13
SNX17-204ENST00000453453 HSPA5P11021 654 aaKnown RBP22.11■■□□□ 1.13
SNX17-204ENST00000453453 NBPF1Q3BBV0 1214 aa22.11■■□□□ 1.13
SNX17-204ENST00000453453 SETBP1Q9Y6X0 1596 aa22.11■■□□□ 1.13
SNX17-204ENST00000453453 SLIT1O75093 1534 aa22.09■■□□□ 1.13
SNX17-204ENST00000453453 CFAP70Q5T0N1 1121 aa22.09■■□□□ 1.13
SNX17-204ENST00000453453 C14orf93Q9H972 538 aaKnown RBP22.09■■□□□ 1.13
SNX17-204ENST00000453453 IQGAP1P46940 1657 aa22.08■■□□□ 1.13
SNX17-204ENST00000453453 EID1Q9Y6B2 187 aa22.08■■□□□ 1.13
SNX17-204ENST00000453453 ARHGAP23Q9P227 1491 aa22.07■■□□□ 1.12
SNX17-204ENST00000453453 SCAF11Q99590 1463 aaKnown RBP22.05■■□□□ 1.12
SNX17-204ENST00000453453 HIRIP3Q9BW71 556 aaPredicted RBP22.05■■□□□ 1.12
SNX17-204ENST00000453453 AEBP2Q6ZN18 517 aaPredicted RBP22.04■■□□□ 1.12
SNX17-204ENST00000453453 EIF3AQ14152 1382 aaKnown RBP22.04■■□□□ 1.12
SNX17-204ENST00000453453 ALKQ9UM73 1620 aa22.03■■□□□ 1.12
SNX17-204ENST00000453453 KDM4FA0A1W2PPD8 638 aa22.03■■□□□ 1.12
SNX17-204ENST00000453453 TXNDC2Q86VQ3 553 aa22.02■■□□□ 1.12
SNX17-204ENST00000453453 SUPT16HQ9Y5B9 1047 aaKnown RBP22.02■■□□□ 1.12
SNX17-204ENST00000453453 ADGRB1O14514 1584 aa22.01■■□□□ 1.11
SNX17-204ENST00000453453 BCANQ96GW7 911 aa22.01■■□□□ 1.11
SNX17-204ENST00000453453 PLEKHG1Q9ULL1 1385 aa22■■□□□ 1.11
SNX17-204ENST00000453453 POLR1AO95602 1720 aaPredicted RBP22■■□□□ 1.11
SNX17-204ENST00000453453 NRXN3Q9Y4C0 1643 aa22■■□□□ 1.11
SNX17-204ENST00000453453 SETD1AO15047 1707 aaKnown RBP21.99■■□□□ 1.11
SNX17-204ENST00000453453 ST20-MTHFSA0A0A6YYL1 179 aa21.97■■□□□ 1.11
SNX17-204ENST00000453453 LTKP29376 864 aa21.97■■□□□ 1.11
SNX17-204ENST00000453453 SENP3Q9H4L4 574 aaPredicted RBP21.97■■□□□ 1.11
SNX17-204ENST00000453453 ASXL1Q8IXJ9 1541 aa21.96■■□□□ 1.11
SNX17-204ENST00000453453 TMEM132EQ6IEE7 984 aa21.95■■□□□ 1.1
SNX17-204ENST00000453453 ANKLE2Q86XL3 938 aa21.95■■□□□ 1.1
SNX17-204ENST00000453453 DIP2AQ14689 1571 aa21.94■■□□□ 1.1
SNX17-204ENST00000453453 ARHGEF28Q8N1W1 1705 aaKnown RBP21.92■■□□□ 1.1
SNX17-204ENST00000453453 YTHDC2Q9H6S0 1430 aaKnown RBP21.92■■□□□ 1.1
SNX17-204ENST00000453453 TRAK1Q9UPV9 953 aa21.91■■□□□ 1.1
SNX17-204ENST00000453453 SLC24A1O60721 1099 aa21.9■■□□□ 1.1
SNX17-204ENST00000453453 ADAMTS13Q76LX8 1427 aa21.9■■□□□ 1.1
SNX17-204ENST00000453453 QRICH2Q9H0J4 1663 aa21.88■■□□□ 1.09
SNX17-204ENST00000453453 CENPJQ9HC77 1338 aaPredicted RBP21.88■■□□□ 1.09
SNX17-204ENST00000453453 LRPPRCP42704 1394 aaKnown RBP21.88■■□□□ 1.09
SNX17-204ENST00000453453 CCDC7Q96M83 1385 aa21.88■■□□□ 1.09
SNX17-204ENST00000453453 KNDC1Q76NI1 1749 aa21.88■■□□□ 1.09
SNX17-204ENST00000453453 STK26Q9P289 416 aa21.87■■□□□ 1.09
SNX17-204ENST00000453453 MED14O60244 1454 aa21.87■■□□□ 1.09
SNX17-204ENST00000453453 TMF1P82094 1093 aa21.86■■□□□ 1.09
SNX17-204ENST00000453453 TBX22Q9Y458 520 aa21.86■■□□□ 1.09
SNX17-204ENST00000453453 DLC1Q96QB1 1528 aa21.86■■□□□ 1.09
SNX17-204ENST00000453453 WASHC2AQ641Q2 1341 aa21.86■■□□□ 1.09
SNX17-204ENST00000453453 TESK2Q96S53 571 aa21.85■■□□□ 1.09
SNX17-204ENST00000453453 METP08581 1390 aa21.85■■□□□ 1.09
SNX17-204ENST00000453453 SBNO2Q9Y2G9 1366 aa21.84■■□□□ 1.09
SNX17-204ENST00000453453 SLC26A8Q96RN1 970 aa21.84■■□□□ 1.09
SNX17-204ENST00000453453 KIF7Q2M1P5 1343 aa21.83■■□□□ 1.09
SNX17-204ENST00000453453 ABCC11Q96J66 1382 aa21.83■■□□□ 1.09
SNX17-204ENST00000453453 NPHP4O75161 1426 aaPredicted RBP21.83■■□□□ 1.08
SNX17-204ENST00000453453 C11orf95C9JLR9 678 aaPredicted RBP21.82■■□□□ 1.08
SNX17-204ENST00000453453 CDCA8Q53HL2 280 aa21.82■■□□□ 1.08
SNX17-204ENST00000453453 POGKQ9P215 609 aa21.81■■□□□ 1.08
SNX17-204ENST00000453453 LMTK3Q96Q04 1460 aa21.81■■□□□ 1.08
SNX17-204ENST00000453453 CPS1P31327 1500 aa21.81■■□□□ 1.08
SNX17-204ENST00000453453 TECPR2O15040 1411 aa21.8■■□□□ 1.08
SNX17-204ENST00000453453 DDX10Q13206 875 aaKnown RBP21.8■■□□□ 1.08
SNX17-204ENST00000453453 POLR3GLQ9BT43 218 aa21.8■■□□□ 1.08
SNX17-204ENST00000453453 PIK3R4Q99570 1358 aa21.8■■□□□ 1.08
SNX17-204ENST00000453453 DISP3Q9P2K9 1392 aa21.79■■□□□ 1.08
SNX17-204ENST00000453453 TSHZ2Q9NRE2 1034 aa21.79■■□□□ 1.08
SNX17-204ENST00000453453 NCKAP5LQ9HCH0 1330 aa21.78■■□□□ 1.08
SNX17-204ENST00000453453 PRAM1Q96QH2 718 aa21.77■■□□□ 1.08
SNX17-204ENST00000453453 FAM135BQ49AJ0 1406 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms