RNA–Protein interactions for RNA: ENST00000453141.5

HDLBP-226, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-226ENST00000453141 MED1Q15648 1581 aaPredicted RBP11.46□□□□□ -0.57
HDLBP-226ENST00000453141 ZFYVE9O95405 1425 aa11.46□□□□□ -0.57
HDLBP-226ENST00000453141 ITGAEP38570 1179 aa11.46□□□□□ -0.57
HDLBP-226ENST00000453141 SLC26A8Q96RN1 970 aa11.46□□□□□ -0.57
HDLBP-226ENST00000453141 TMEM131LA2VDJ0 1609 aa11.46□□□□□ -0.58
HDLBP-226ENST00000453141 SOCS7O14512 581 aa11.45□□□□□ -0.58
HDLBP-226ENST00000453141 NWD1Q149M9 1564 aa11.45□□□□□ -0.58
HDLBP-226ENST00000453141 NKTRP30414 1462 aaKnown RBP11.44□□□□□ -0.58
HDLBP-226ENST00000453141 RIMS2Q9UQ26 1411 aa11.44□□□□□ -0.58
HDLBP-226ENST00000453141 NUP155O75694 1391 aa11.44□□□□□ -0.58
HDLBP-226ENST00000453141 KCNA6P17658 529 aa11.44□□□□□ -0.58
HDLBP-226ENST00000453141 MYO5BQ9ULV0 1848 aa11.44□□□□□ -0.58
HDLBP-226ENST00000453141 TMEM94Q12767 1356 aa11.43□□□□□ -0.58
HDLBP-226ENST00000453141 PLEKHG1Q9ULL1 1385 aa11.43□□□□□ -0.58
HDLBP-226ENST00000453141 PPP1R15AO75807 674 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-226ENST00000453141 ZEB1P37275 1124 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-226ENST00000453141 BCANQ96GW7 911 aa11.43□□□□□ -0.58
HDLBP-226ENST00000453141 HDGFP51858 240 aaKnown RBP11.42□□□□□ -0.58
HDLBP-226ENST00000453141 CHGAP10645 457 aaKnown RBP11.41□□□□□ -0.58
HDLBP-226ENST00000453141 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.41□□□□□ -0.58
HDLBP-226ENST00000453141 RRBP1Q9P2E9 1410 aaKnown RBP11.41□□□□□ -0.58
HDLBP-226ENST00000453141 PROSER2Q86WR7 435 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-226ENST00000453141 FAM135BQ49AJ0 1406 aa11.4□□□□□ -0.58
HDLBP-226ENST00000453141 DIP2AQ14689 1571 aa11.39□□□□□ -0.59
HDLBP-226ENST00000453141 RBM33Q96EV2 1170 aaKnown RBP11.39□□□□□ -0.59
HDLBP-226ENST00000453141 CHD2O14647 1828 aaKnown RBP11.38□□□□□ -0.59
HDLBP-226ENST00000453141 MSH6P52701 1360 aa11.38□□□□□ -0.59
HDLBP-226ENST00000453141 SPHKAPQ2M3C7 1700 aa11.38□□□□□ -0.59
HDLBP-226ENST00000453141 ROBO1Q9Y6N7 1651 aa11.37□□□□□ -0.59
HDLBP-226ENST00000453141 ADAMTS13Q76LX8 1427 aa11.37□□□□□ -0.59
HDLBP-226ENST00000453141 TBX22Q9Y458 520 aa11.37□□□□□ -0.59
HDLBP-226ENST00000453141 NUTM2DQ5VT03 806 aaPredicted RBP11.36□□□□□ -0.59
HDLBP-226ENST00000453141 NAIPQ13075 1403 aa11.35□□□□□ -0.59
HDLBP-226ENST00000453141 TRPM2O94759 1503 aa11.35□□□□□ -0.59
HDLBP-226ENST00000453141 PIK3R4Q99570 1358 aa11.35□□□□□ -0.59
HDLBP-226ENST00000453141 NCOA3Q9Y6Q9 1424 aa11.35□□□□□ -0.59
HDLBP-226ENST00000453141 HFM1A2PYH4 1435 aa11.34□□□□□ -0.59
HDLBP-226ENST00000453141 SLAIN2Q9P270 581 aa11.33□□□□□ -0.6
HDLBP-226ENST00000453141 CLTCL1P53675 1640 aa11.33□□□□□ -0.6
HDLBP-226ENST00000453141 SETBP1Q9Y6X0 1596 aa11.33□□□□□ -0.6
HDLBP-226ENST00000453141 NRXN3Q9Y4C0 1643 aa11.32□□□□□ -0.6
HDLBP-226ENST00000453141 ZNF326Q5BKZ1 582 aaKnown RBP11.31□□□□□ -0.6
HDLBP-226ENST00000453141 C14orf37Q86TY3 774 aa11.31□□□□□ -0.6
HDLBP-226ENST00000453141 CCER1Q8TC90 406 aaPredicted RBP11.31□□□□□ -0.6
HDLBP-226ENST00000453141 NEXMIFQ5QGS0 1516 aa11.3□□□□□ -0.6
HDLBP-226ENST00000453141 PHLPP1O60346 1717 aa11.3□□□□□ -0.6
HDLBP-226ENST00000453141 XRN1Q8IZH2 1706 aaKnown RBP11.3□□□□□ -0.6
HDLBP-226ENST00000453141 PTPRUQ92729 1446 aa11.3□□□□□ -0.6
HDLBP-226ENST00000453141 AMOTL2Q9Y2J4 779 aa11.3□□□□□ -0.6
HDLBP-226ENST00000453141 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-226ENST00000453141 CADPS2Q86UW7 1296 aa11.29□□□□□ -0.6
HDLBP-226ENST00000453141 TRIM52Q96A61 297 aa11.28□□□□□ -0.6
HDLBP-226ENST00000453141 C19orf44Q9H6X5 657 aa11.28□□□□□ -0.6
HDLBP-226ENST00000453141 KIF1BO60333 1816 aa11.28□□□□□ -0.6
HDLBP-226ENST00000453141 COL16A1Q07092 1604 aaPredicted RBP11.27□□□□□ -0.6
HDLBP-226ENST00000453141 DCCP43146 1447 aa11.27□□□□□ -0.6
HDLBP-226ENST00000453141 ATF3P18847 181 aa11.27□□□□□ -0.61
HDLBP-226ENST00000453141 RGS17Q9UGC6 210 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-226ENST00000453141 METP08581 1390 aa11.27□□□□□ -0.61
HDLBP-226ENST00000453141 SLC4A1APQ9BWU0 796 aaKnown RBP11.26□□□□□ -0.61
HDLBP-226ENST00000453141 JCADQ9P266 1359 aa11.26□□□□□ -0.61
HDLBP-226ENST00000453141 AHDC1Q5TGY3 1603 aaPredicted RBP11.25□□□□□ -0.61
HDLBP-226ENST00000453141 VGFO15240 615 aaPredicted RBP11.23□□□□□ -0.61
HDLBP-226ENST00000453141 ADGRL3Q9HAR2 1447 aa11.23□□□□□ -0.61
HDLBP-226ENST00000453141 MST1RQ04912 1400 aa11.22□□□□□ -0.61
HDLBP-226ENST00000453141 FOXD1Q16676 465 aa11.22□□□□□ -0.61
HDLBP-226ENST00000453141 RPGRIP1LQ68CZ1 1315 aa11.22□□□□□ -0.61
HDLBP-226ENST00000453141 BRINP3Q76B58 766 aa11.22□□□□□ -0.61
HDLBP-226ENST00000453141 ASXL1Q8IXJ9 1541 aa11.22□□□□□ -0.61
HDLBP-226ENST00000453141 SETD1AO15047 1707 aaKnown RBP11.21□□□□□ -0.61
HDLBP-226ENST00000453141 NALCNQ8IZF0 1738 aa11.21□□□□□ -0.61
HDLBP-226ENST00000453141 SHPRHQ149N8 1683 aa11.21□□□□□ -0.61
HDLBP-226ENST00000453141 PTCH1Q13635 1447 aa11.21□□□□□ -0.61
HDLBP-226ENST00000453141 SPATA31A6Q5VVP1 1343 aa11.21□□□□□ -0.61
HDLBP-226ENST00000453141 PPLO60437 1756 aa11.21□□□□□ -0.62
HDLBP-226ENST00000453141 POTEAQ6S8J7 498 aa11.2□□□□□ -0.62
HDLBP-226ENST00000453141 LRP6O75581 1613 aa11.2□□□□□ -0.62
HDLBP-226ENST00000453141 CCDC144AA2RUR9 1427 aa11.19□□□□□ -0.62
HDLBP-226ENST00000453141 PRAG1Q86YV5 1406 aa11.19□□□□□ -0.62
HDLBP-226ENST00000453141 NHSL1Q5SYE7 1610 aa11.19□□□□□ -0.62
HDLBP-226ENST00000453141 ROBO2Q9HCK4 1378 aa11.17□□□□□ -0.62
HDLBP-226ENST00000453141 MEX3CQ5U5Q3 659 aaKnown RBP11.17□□□□□ -0.62
HDLBP-226ENST00000453141 SETD5Q9C0A6 1442 aa11.17□□□□□ -0.62
HDLBP-226ENST00000453141 MPHOSPH9Q99550 1183 aa11.16□□□□□ -0.62
HDLBP-226ENST00000453141 C1orf167Q5SNV9 1468 aa11.16□□□□□ -0.62
HDLBP-226ENST00000453141 SPATA31E1Q6ZUB1 1445 aa11.16□□□□□ -0.62
HDLBP-226ENST00000453141 DHX57Q6P158 1386 aaKnown RBP11.16□□□□□ -0.62
HDLBP-226ENST00000453141 ACIN1Q9UKV3 1341 aaKnown RBP11.15□□□□□ -0.62
HDLBP-226ENST00000453141 IFT172Q9UG01 1749 aa11.15□□□□□ -0.63
HDLBP-226ENST00000453141 ANKRD30BQ9BXX2 1392 aa11.15□□□□□ -0.63
HDLBP-226ENST00000453141 CLSPNQ9HAW4 1339 aa11.14□□□□□ -0.63
HDLBP-226ENST00000453141 LRRC59Q96AG4 307 aaKnown RBP11.14□□□□□ -0.63
HDLBP-226ENST00000453141 LAMC1P11047 1609 aa11.13□□□□□ -0.63
HDLBP-226ENST00000453141 ADGRF5Q8IZF2 1346 aa11.13□□□□□ -0.63
HDLBP-226ENST00000453141 CDC42BPGQ6DT37 1551 aa11.13□□□□□ -0.63
HDLBP-226ENST00000453141 RGL3Q3MIN7 710 aa11.13□□□□□ -0.63
HDLBP-226ENST00000453141 ZNF772Q68DY9 489 aaPredicted RBP11.13□□□□□ -0.63
HDLBP-226ENST00000453141 DDX17Q92841 729 aaKnown RBP11.13□□□□□ -0.63
HDLBP-226ENST00000453141 RAB3GAP2Q9H2M9 1393 aa11.13□□□□□ -0.63
HDLBP-226ENST00000453141 TECPR2O15040 1411 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms