RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 PLEKHG1Q9ULL1 1385 aa24.16■■□□□ 1.46
SGCE-208ENST00000450385 RIMS2Q9UQ26 1411 aa24.15■■□□□ 1.46
SGCE-208ENST00000450385 SPHKAPQ2M3C7 1700 aa24.13■■□□□ 1.45
SGCE-208ENST00000450385 PPP1R15AO75807 674 aaPredicted RBP24.12■■□□□ 1.45
SGCE-208ENST00000450385 TBX22Q9Y458 520 aa24.12■■□□□ 1.45
SGCE-208ENST00000450385 CHGAP10645 457 aaKnown RBP24.1■■□□□ 1.45
SGCE-208ENST00000450385 BCANQ96GW7 911 aa24.1■■□□□ 1.45
SGCE-208ENST00000450385 SLC26A8Q96RN1 970 aa24.1■■□□□ 1.45
SGCE-208ENST00000450385 NKTRP30414 1462 aaKnown RBP24.07■■□□□ 1.44
SGCE-208ENST00000450385 PIK3R4Q99570 1358 aa24.07■■□□□ 1.44
SGCE-208ENST00000450385 PIP4K2BP78356 416 aa24.07■■□□□ 1.44
SGCE-208ENST00000450385 CHD2O14647 1828 aaKnown RBP24.07■■□□□ 1.44
SGCE-208ENST00000450385 DIP2AQ14689 1571 aa24.06■■□□□ 1.44
SGCE-208ENST00000450385 NWD1Q149M9 1564 aa24.06■■□□□ 1.44
SGCE-208ENST00000450385 XIRP1Q702N8 1843 aaKnown RBP24.05■■□□□ 1.44
SGCE-208ENST00000450385 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
SGCE-208ENST00000450385 PROSER2Q86WR7 435 aaPredicted RBP24.04■■□□□ 1.44
SGCE-208ENST00000450385 TRIM52Q96A61 297 aa24.04■■□□□ 1.44
SGCE-208ENST00000450385 ALKQ9UM73 1620 aa24.03■■□□□ 1.44
SGCE-208ENST00000450385 NCOA3Q9Y6Q9 1424 aa24.03■■□□□ 1.44
SGCE-208ENST00000450385 TRPM2O94759 1503 aa24.03■■□□□ 1.44
SGCE-208ENST00000450385 KIF1BO60333 1816 aa24.01■■□□□ 1.43
SGCE-208ENST00000450385 TMEM94Q12767 1356 aa24.01■■□□□ 1.43
SGCE-208ENST00000450385 SLC4A1APQ9BWU0 796 aaKnown RBP24■■□□□ 1.43
SGCE-208ENST00000450385 HSPA1LP34931 641 aa23.99■■□□□ 1.43
SGCE-208ENST00000450385 DISP3Q9P2K9 1392 aa23.98■■□□□ 1.43
SGCE-208ENST00000450385 FAM135BQ49AJ0 1406 aa23.97■■□□□ 1.43
SGCE-208ENST00000450385 ADAMTS13Q76LX8 1427 aa23.97■■□□□ 1.43
SGCE-208ENST00000450385 ZNF326Q5BKZ1 582 aaKnown RBP23.96■■□□□ 1.43
SGCE-208ENST00000450385 CLTCL1P53675 1640 aa23.95■■□□□ 1.42
SGCE-208ENST00000450385 MSH6P52701 1360 aa23.94■■□□□ 1.42
SGCE-208ENST00000450385 RPGRIP1LQ68CZ1 1315 aa23.94■■□□□ 1.42
SGCE-208ENST00000450385 SETBP1Q9Y6X0 1596 aa23.94■■□□□ 1.42
SGCE-208ENST00000450385 VGFO15240 615 aaPredicted RBP23.92■■□□□ 1.42
SGCE-208ENST00000450385 NUTM2DQ5VT03 806 aaPredicted RBP23.91■■□□□ 1.42
SGCE-208ENST00000450385 NEXMIFQ5QGS0 1516 aa23.88■■□□□ 1.41
SGCE-208ENST00000450385 MPHOSPH9Q99550 1183 aa23.87■■□□□ 1.41
SGCE-208ENST00000450385 C19orf44Q9H6X5 657 aa23.87■■□□□ 1.41
SGCE-208ENST00000450385 AMOTL2Q9Y2J4 779 aa23.87■■□□□ 1.41
SGCE-208ENST00000450385 SETD5Q9C0A6 1442 aa23.86■■□□□ 1.41
SGCE-208ENST00000450385 SLAIN2Q9P270 581 aa23.86■■□□□ 1.41
SGCE-208ENST00000450385 NRXN3Q9Y4C0 1643 aa23.85■■□□□ 1.41
SGCE-208ENST00000450385 CADPS2Q86UW7 1296 aa23.85■■□□□ 1.41
SGCE-208ENST00000450385 SENP3Q9H4L4 574 aaPredicted RBP23.81■■□□□ 1.4
SGCE-208ENST00000450385 CCDC144AA2RUR9 1427 aa23.81■■□□□ 1.4
SGCE-208ENST00000450385 ATF3P18847 181 aa23.8■■□□□ 1.4
SGCE-208ENST00000450385 HRCP23327 699 aa23.8■■□□□ 1.4
SGCE-208ENST00000450385 C14orf37Q86TY3 774 aa23.8■■□□□ 1.4
SGCE-208ENST00000450385 RBM33Q96EV2 1170 aaKnown RBP23.8■■□□□ 1.4
SGCE-208ENST00000450385 ROBO1Q9Y6N7 1651 aa23.79■■□□□ 1.4
SGCE-208ENST00000450385 XRN1Q8IZH2 1706 aaKnown RBP23.79■■□□□ 1.4
SGCE-208ENST00000450385 DCCP43146 1447 aa23.79■■□□□ 1.4
SGCE-208ENST00000450385 PTPRUQ92729 1446 aa23.79■■□□□ 1.4
SGCE-208ENST00000450385 PPLO60437 1756 aa23.78■■□□□ 1.4
SGCE-208ENST00000450385 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.77■■□□□ 1.4
SGCE-208ENST00000450385 MED1Q15648 1581 aaPredicted RBP23.77■■□□□ 1.4
SGCE-208ENST00000450385 METP08581 1390 aa23.77■■□□□ 1.4
SGCE-208ENST00000450385 ANKRD30BQ9BXX2 1392 aa23.75■■□□□ 1.39
SGCE-208ENST00000450385 FOXD1Q16676 465 aa23.73■■□□□ 1.39
SGCE-208ENST00000450385 PRAG1Q86YV5 1406 aa23.73■■□□□ 1.39
SGCE-208ENST00000450385 SPATA31E1Q6ZUB1 1445 aa23.72■■□□□ 1.39
SGCE-208ENST00000450385 ILDR2Q71H61 639 aa23.71■■□□□ 1.39
SGCE-208ENST00000450385 RAB3GAP2Q9H2M9 1393 aa23.7■■□□□ 1.38
SGCE-208ENST00000450385 SETD1AO15047 1707 aaKnown RBP23.7■■□□□ 1.38
SGCE-208ENST00000450385 PTCH1Q13635 1447 aa23.68■■□□□ 1.38
SGCE-208ENST00000450385 SOCS7O14512 581 aa23.68■■□□□ 1.38
SGCE-208ENST00000450385 PHLPP1O60346 1717 aa23.67■■□□□ 1.38
SGCE-208ENST00000450385 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
SGCE-208ENST00000450385 ADGRL3Q9HAR2 1447 aa23.66■■□□□ 1.38
SGCE-208ENST00000450385 IFT172Q9UG01 1749 aa23.65■■□□□ 1.38
SGCE-208ENST00000450385 RGL3Q3MIN7 710 aa23.65■■□□□ 1.38
SGCE-208ENST00000450385 JCADQ9P266 1359 aa23.64■■□□□ 1.37
SGCE-208ENST00000450385 AHDC1Q5TGY3 1603 aaPredicted RBP23.62■■□□□ 1.37
SGCE-208ENST00000450385 STAC3Q96MF2 364 aa23.62■■□□□ 1.37
SGCE-208ENST00000450385 ADGRF5Q8IZF2 1346 aa23.6■■□□□ 1.37
SGCE-208ENST00000450385 BRINP3Q76B58 766 aa23.59■■□□□ 1.37
SGCE-208ENST00000450385 MST1RQ04912 1400 aa23.59■■□□□ 1.37
SGCE-208ENST00000450385 COL16A1Q07092 1604 aaPredicted RBP23.58■■□□□ 1.36
SGCE-208ENST00000450385 SPATA31A6Q5VVP1 1343 aa23.58■■□□□ 1.36
SGCE-208ENST00000450385 ROBO2Q9HCK4 1378 aa23.57■■□□□ 1.36
SGCE-208ENST00000450385 SIRT1Q96EB6 747 aa23.57■■□□□ 1.36
SGCE-208ENST00000450385 PIK3C2GO75747 1445 aa23.57■■□□□ 1.36
SGCE-208ENST00000450385 NALCNQ8IZF0 1738 aa23.56■■□□□ 1.36
SGCE-208ENST00000450385 ABCC11Q96J66 1382 aa23.56■■□□□ 1.36
SGCE-208ENST00000450385 TECPR2O15040 1411 aa23.56■■□□□ 1.36
SGCE-208ENST00000450385 LRPPRCP42704 1394 aaKnown RBP23.54■■□□□ 1.36
SGCE-208ENST00000450385 C14orf93Q9H972 538 aaKnown RBP23.54■■□□□ 1.36
SGCE-208ENST00000450385 MYOM2P54296 1465 aa23.54■■□□□ 1.36
SGCE-208ENST00000450385 NRXN1Q9ULB1 1477 aa23.53■■□□□ 1.36
SGCE-208ENST00000450385 ASXL1Q8IXJ9 1541 aa23.53■■□□□ 1.36
SGCE-208ENST00000450385 LAMC1P11047 1609 aa23.52■■□□□ 1.36
SGCE-208ENST00000450385 LRRC59Q96AG4 307 aaKnown RBP23.52■■□□□ 1.36
SGCE-208ENST00000450385 SHPRHQ149N8 1683 aa23.51■■□□□ 1.35
SGCE-208ENST00000450385 NHSL1Q5SYE7 1610 aa23.51■■□□□ 1.35
SGCE-208ENST00000450385 KNDC1Q76NI1 1749 aa23.5■■□□□ 1.35
SGCE-208ENST00000450385 C1orf167Q5SNV9 1468 aa23.49■■□□□ 1.35
SGCE-208ENST00000450385 DHX57Q6P158 1386 aaKnown RBP23.48■■□□□ 1.35
SGCE-208ENST00000450385 YTHDC2Q9H6S0 1430 aaKnown RBP23.47■■□□□ 1.35
SGCE-208ENST00000450385 RGS17Q9UGC6 210 aaPredicted RBP23.46■■□□□ 1.35
SGCE-208ENST00000450385 CDC42BPGQ6DT37 1551 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms