RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 CFAP70Q5T0N1 1121 aa16.88■□□□□ 0.29
SHC1-210ENST00000448116 RGS3P49796 1198 aa16.87■□□□□ 0.29
SHC1-210ENST00000448116 IQGAP3Q86VI3 1631 aa16.86■□□□□ 0.29
SHC1-210ENST00000448116 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.86■□□□□ 0.29
SHC1-210ENST00000448116 MAST1Q9Y2H9 1570 aa16.86■□□□□ 0.29
SHC1-210ENST00000448116 EIF2AK4Q9P2K8 1649 aaKnown RBP16.86■□□□□ 0.29
SHC1-210ENST00000448116 SLC4A3P48751 1232 aa16.86■□□□□ 0.29
SHC1-210ENST00000448116 WDR7Q9Y4E6 1490 aa16.85■□□□□ 0.29
SHC1-210ENST00000448116 ABCC2Q92887 1545 aa16.85■□□□□ 0.29
SHC1-210ENST00000448116 TNNT2P45379 298 aaPredicted RBP16.84■□□□□ 0.29
SHC1-210ENST00000448116 ZMYM4Q5VZL5 1548 aa16.84■□□□□ 0.29
SHC1-210ENST00000448116 MYO5CQ9NQX4 1742 aa16.84■□□□□ 0.29
SHC1-210ENST00000448116 ATP10AO60312 1499 aa16.83■□□□□ 0.29
SHC1-210ENST00000448116 SPINK5Q9NQ38 1064 aaPredicted RBP16.83■□□□□ 0.28
SHC1-210ENST00000448116 PLXNC1O60486 1568 aa16.82■□□□□ 0.28
SHC1-210ENST00000448116 NEUROD2Q15784 382 aa16.82■□□□□ 0.28
SHC1-210ENST00000448116 CHD1O14646 1710 aa16.82■□□□□ 0.28
SHC1-210ENST00000448116 SLFN5Q08AF3 891 aa16.82■□□□□ 0.28
SHC1-210ENST00000448116 CENPQQ7L2Z9 268 aaPredicted RBP16.82■□□□□ 0.28
SHC1-210ENST00000448116 KANK1Q14678 1352 aa16.81■□□□□ 0.28
SHC1-210ENST00000448116 SCAF11Q99590 1463 aaKnown RBP16.81■□□□□ 0.28
SHC1-210ENST00000448116 BCAR3O75815 825 aa16.81■□□□□ 0.28
SHC1-210ENST00000448116 INSRP06213 1382 aa16.81■□□□□ 0.28
SHC1-210ENST00000448116 ADGRF5Q8IZF2 1346 aa16.8■□□□□ 0.28
SHC1-210ENST00000448116 DDRGK1Q96HY6 314 aa16.79■□□□□ 0.28
SHC1-210ENST00000448116 LAMC1P11047 1609 aa16.79■□□□□ 0.28
SHC1-210ENST00000448116 EIF3AQ14152 1382 aaKnown RBP16.79■□□□□ 0.28
SHC1-210ENST00000448116 CANXP27824 592 aaKnown RBP16.79■□□□□ 0.28
SHC1-210ENST00000448116 ZNF521Q96K83 1311 aa16.77■□□□□ 0.28
SHC1-210ENST00000448116 PPM1GO15355 546 aaPredicted RBP16.77■□□□□ 0.28
SHC1-210ENST00000448116 CARD14Q9BXL6 1004 aa16.77■□□□□ 0.28
SHC1-210ENST00000448116 KDM2BQ8NHM5 1336 aa16.77■□□□□ 0.28
SHC1-210ENST00000448116 SCAPERQ9BY12 1400 aa16.77■□□□□ 0.27
SHC1-210ENST00000448116 SENP3Q9H4L4 574 aaPredicted RBP16.77■□□□□ 0.27
SHC1-210ENST00000448116 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.27
SHC1-210ENST00000448116 ASXL1Q8IXJ9 1541 aa16.76■□□□□ 0.27
SHC1-210ENST00000448116 STAC3Q96MF2 364 aa16.76■□□□□ 0.27
SHC1-210ENST00000448116 TRAK1Q9UPV9 953 aa16.76■□□□□ 0.27
SHC1-210ENST00000448116 RRP7AQ9Y3A4 280 aaKnown RBP16.75■□□□□ 0.27
SHC1-210ENST00000448116 RTN4Q9NQC3 1192 aaKnown RBP16.75■□□□□ 0.27
SHC1-210ENST00000448116 FAM161AQ3B820 660 aa16.75■□□□□ 0.27
SHC1-210ENST00000448116 FRAT1Q92837 279 aaPredicted RBP16.75■□□□□ 0.27
SHC1-210ENST00000448116 ABCC1P33527 1531 aa16.74■□□□□ 0.27
SHC1-210ENST00000448116 MADDQ8WXG6 1647 aa16.73■□□□□ 0.27
SHC1-210ENST00000448116 E9PSI1 815 aa16.73■□□□□ 0.27
SHC1-210ENST00000448116 MORC1Q86VD1 984 aa16.73■□□□□ 0.27
SHC1-210ENST00000448116 PIK3C2GO75747 1445 aa16.72■□□□□ 0.27
SHC1-210ENST00000448116 COG6Q9Y2V7 657 aa16.71■□□□□ 0.27
SHC1-210ENST00000448116 ZCCHC11Q5TAX3 1644 aaKnown RBP16.71■□□□□ 0.27
SHC1-210ENST00000448116 TMEM132EQ6IEE7 984 aa16.71■□□□□ 0.27
SHC1-210ENST00000448116 SLC12A5Q9H2X9 1139 aa16.71■□□□□ 0.27
SHC1-210ENST00000448116 RNF17Q9BXT8 1623 aaKnown RBP16.71■□□□□ 0.27
SHC1-210ENST00000448116 PTPRTO14522 1441 aa16.71■□□□□ 0.26
SHC1-210ENST00000448116 A0A0U1RQG5 324 aaPredicted RBP16.71■□□□□ 0.26
SHC1-210ENST00000448116 GGT6Q6P531 493 aa16.71■□□□□ 0.26
SHC1-210ENST00000448116 PANK1Q8TE04 598 aa16.71■□□□□ 0.26
SHC1-210ENST00000448116 TRPM2O94759 1503 aa16.7■□□□□ 0.26
SHC1-210ENST00000448116 NUTM2DQ5VT03 806 aaPredicted RBP16.7■□□□□ 0.26
SHC1-210ENST00000448116 CLTCL1P53675 1640 aa16.7■□□□□ 0.26
SHC1-210ENST00000448116 C8orf34Q49A92 452 aa16.7■□□□□ 0.26
SHC1-210ENST00000448116 SHROOM2Q13796 1616 aa16.7■□□□□ 0.26
SHC1-210ENST00000448116 UGGT1Q9NYU2 1555 aa16.7■□□□□ 0.26
SHC1-210ENST00000448116 TRMT2AQ8IZ69 625 aaKnown RBP16.69■□□□□ 0.26
SHC1-210ENST00000448116 USP35Q9P2H5 1018 aa16.69■□□□□ 0.26
SHC1-210ENST00000448116 RTEL1-TNFRSF6BF6WH68 1400 aa16.69■□□□□ 0.26
SHC1-210ENST00000448116 CENPJQ9HC77 1338 aaPredicted RBP16.69■□□□□ 0.26
SHC1-210ENST00000448116 IGHDP01880 384 aa16.68■□□□□ 0.26
SHC1-210ENST00000448116 NKTRP30414 1462 aaKnown RBP16.68■□□□□ 0.26
SHC1-210ENST00000448116 FANCAO15360 1455 aa16.68■□□□□ 0.26
SHC1-210ENST00000448116 KLHL34Q8N239 644 aa16.68■□□□□ 0.26
SHC1-210ENST00000448116 BCL2L13Q9BXK5 485 aa16.68■□□□□ 0.26
SHC1-210ENST00000448116 SYNMO15061 1565 aa16.67■□□□□ 0.26
SHC1-210ENST00000448116 WWC1Q8IX03 1113 aa16.67■□□□□ 0.26
SHC1-210ENST00000448116 IQGAP1P46940 1657 aa16.67■□□□□ 0.26
SHC1-210ENST00000448116 NPC1L1Q9UHC9 1359 aa16.67■□□□□ 0.26
SHC1-210ENST00000448116 NFKBIBQ15653 356 aa16.66■□□□□ 0.26
SHC1-210ENST00000448116 ZFYVE16Q7Z3T8 1539 aa16.66■□□□□ 0.26
SHC1-210ENST00000448116 ERVK-7P63135 1459 aa16.65■□□□□ 0.26
SHC1-210ENST00000448116 SAFB2Q14151 953 aaKnown RBP eCLIP16.65■□□□□ 0.26
SHC1-210ENST00000448116 IL27Q8NEV9 243 aa16.65■□□□□ 0.26
SHC1-210ENST00000448116 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
SHC1-210ENST00000448116 CLUAP1Q96AJ1 413 aa16.64■□□□□ 0.25
SHC1-210ENST00000448116 ADGRL1O94910 1474 aa16.64■□□□□ 0.25
SHC1-210ENST00000448116 SPHKAPQ2M3C7 1700 aa16.63■□□□□ 0.25
SHC1-210ENST00000448116 NSD3Q9BZ95 1437 aa16.63■□□□□ 0.25
SHC1-210ENST00000448116 ATP7AQ04656 1500 aa16.63■□□□□ 0.25
SHC1-210ENST00000448116 MTHFSP49914 203 aa16.62■□□□□ 0.25
SHC1-210ENST00000448116 NOS1P29475 1434 aa16.62■□□□□ 0.25
SHC1-210ENST00000448116 CGNL1Q0VF96 1302 aa16.62■□□□□ 0.25
SHC1-210ENST00000448116 UHRF1BP1LA0JNW5 1464 aa16.62■□□□□ 0.25
SHC1-210ENST00000448116 TNNQ9UQP3 1299 aa16.61■□□□□ 0.25
SHC1-210ENST00000448116 RUNDC1Q96C34 613 aa16.61■□□□□ 0.25
SHC1-210ENST00000448116 PDE3AQ14432 1141 aa16.6■□□□□ 0.25
SHC1-210ENST00000448116 KDM5AP29375 1690 aaKnown RBP16.6■□□□□ 0.25
SHC1-210ENST00000448116 CEP152O94986 1710 aa16.6■□□□□ 0.25
SHC1-210ENST00000448116 U2AF1L5P0DN76 240 aaPredicted RBP16.59■□□□□ 0.25
SHC1-210ENST00000448116 U2AF1Q01081 240 aaKnown RBP eCLIP16.59■□□□□ 0.25
SHC1-210ENST00000448116 CFAP53Q96M91 514 aa16.59■□□□□ 0.25
SHC1-210ENST00000448116 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
SHC1-210ENST00000448116 TET3O43151 1660 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms