RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 PLEKHG1Q9ULL1 1385 aa24.16■■□□□ 1.46
SPTLC1P1-201ENST00000447199 KCNA6P17658 529 aa24.15■■□□□ 1.46
SPTLC1P1-201ENST00000447199 NAIPQ13075 1403 aa24.14■■□□□ 1.45
SPTLC1P1-201ENST00000447199 MYO5BQ9ULV0 1848 aa24.14■■□□□ 1.45
SPTLC1P1-201ENST00000447199 XIRP1Q702N8 1843 aaKnown RBP24.13■■□□□ 1.45
SPTLC1P1-201ENST00000447199 NWD1Q149M9 1564 aa24.12■■□□□ 1.45
SPTLC1P1-201ENST00000447199 ILDR2Q71H61 639 aa24.11■■□□□ 1.45
SPTLC1P1-201ENST00000447199 TMEM94Q12767 1356 aa24.1■■□□□ 1.45
SPTLC1P1-201ENST00000447199 HDGFP51858 240 aaKnown RBP24.09■■□□□ 1.45
SPTLC1P1-201ENST00000447199 NKTRP30414 1462 aaKnown RBP24.08■■□□□ 1.45
SPTLC1P1-201ENST00000447199 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.08■■□□□ 1.45
SPTLC1P1-201ENST00000447199 CHGAP10645 457 aaKnown RBP24.07■■□□□ 1.44
SPTLC1P1-201ENST00000447199 PPP1R15AO75807 674 aaPredicted RBP24.06■■□□□ 1.44
SPTLC1P1-201ENST00000447199 HFM1A2PYH4 1435 aa24.05■■□□□ 1.44
SPTLC1P1-201ENST00000447199 ADAMTS13Q76LX8 1427 aa24.05■■□□□ 1.44
SPTLC1P1-201ENST00000447199 BCANQ96GW7 911 aa24.04■■□□□ 1.44
SPTLC1P1-201ENST00000447199 TBX22Q9Y458 520 aa24.04■■□□□ 1.44
SPTLC1P1-201ENST00000447199 PROSER2Q86WR7 435 aaPredicted RBP24.03■■□□□ 1.44
SPTLC1P1-201ENST00000447199 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
SPTLC1P1-201ENST00000447199 SPHKAPQ2M3C7 1700 aa24.03■■□□□ 1.44
SPTLC1P1-201ENST00000447199 NUTM2DQ5VT03 806 aaPredicted RBP24.01■■□□□ 1.43
SPTLC1P1-201ENST00000447199 RBM33Q96EV2 1170 aaKnown RBP24.01■■□□□ 1.43
SPTLC1P1-201ENST00000447199 CHD2O14647 1828 aaKnown RBP24■■□□□ 1.43
SPTLC1P1-201ENST00000447199 FAM135BQ49AJ0 1406 aa24■■□□□ 1.43
SPTLC1P1-201ENST00000447199 DIP2AQ14689 1571 aa23.99■■□□□ 1.43
SPTLC1P1-201ENST00000447199 TRPM2O94759 1503 aa23.98■■□□□ 1.43
SPTLC1P1-201ENST00000447199 MED1Q15648 1581 aaPredicted RBP23.98■■□□□ 1.43
SPTLC1P1-201ENST00000447199 PIK3R4Q99570 1358 aa23.97■■□□□ 1.43
SPTLC1P1-201ENST00000447199 CLTCL1P53675 1640 aa23.95■■□□□ 1.43
SPTLC1P1-201ENST00000447199 NCOA3Q9Y6Q9 1424 aa23.93■■□□□ 1.42
SPTLC1P1-201ENST00000447199 MSH6P52701 1360 aa23.92■■□□□ 1.42
SPTLC1P1-201ENST00000447199 SETBP1Q9Y6X0 1596 aa23.92■■□□□ 1.42
SPTLC1P1-201ENST00000447199 PTPRUQ92729 1446 aa23.92■■□□□ 1.42
SPTLC1P1-201ENST00000447199 NRXN3Q9Y4C0 1643 aa23.92■■□□□ 1.42
SPTLC1P1-201ENST00000447199 SOCS7O14512 581 aa23.9■■□□□ 1.42
SPTLC1P1-201ENST00000447199 TRIM52Q96A61 297 aa23.89■■□□□ 1.41
SPTLC1P1-201ENST00000447199 NEXMIFQ5QGS0 1516 aa23.89■■□□□ 1.41
SPTLC1P1-201ENST00000447199 ZNF326Q5BKZ1 582 aaKnown RBP23.88■■□□□ 1.41
SPTLC1P1-201ENST00000447199 ROBO1Q9Y6N7 1651 aa23.88■■□□□ 1.41
SPTLC1P1-201ENST00000447199 SLC4A1APQ9BWU0 796 aaKnown RBP23.87■■□□□ 1.41
SPTLC1P1-201ENST00000447199 SLAIN2Q9P270 581 aa23.86■■□□□ 1.41
SPTLC1P1-201ENST00000447199 AMOTL2Q9Y2J4 779 aa23.86■■□□□ 1.41
SPTLC1P1-201ENST00000447199 METP08581 1390 aa23.83■■□□□ 1.41
SPTLC1P1-201ENST00000447199 XRN1Q8IZH2 1706 aaKnown RBP23.83■■□□□ 1.41
SPTLC1P1-201ENST00000447199 C19orf44Q9H6X5 657 aa23.81■■□□□ 1.4
SPTLC1P1-201ENST00000447199 KIF1BO60333 1816 aa23.8■■□□□ 1.4
SPTLC1P1-201ENST00000447199 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.79■■□□□ 1.4
SPTLC1P1-201ENST00000447199 C14orf37Q86TY3 774 aa23.77■■□□□ 1.4
SPTLC1P1-201ENST00000447199 CADPS2Q86UW7 1296 aa23.77■■□□□ 1.4
SPTLC1P1-201ENST00000447199 FOXD1Q16676 465 aa23.76■■□□□ 1.39
SPTLC1P1-201ENST00000447199 RPGRIP1LQ68CZ1 1315 aa23.76■■□□□ 1.39
SPTLC1P1-201ENST00000447199 DCCP43146 1447 aa23.75■■□□□ 1.39
SPTLC1P1-201ENST00000447199 VGFO15240 615 aaPredicted RBP23.74■■□□□ 1.39
SPTLC1P1-201ENST00000447199 PHF23Q9BUL5 403 aaPredicted RBP23.74■■□□□ 1.39
SPTLC1P1-201ENST00000447199 ATF3P18847 181 aa23.73■■□□□ 1.39
SPTLC1P1-201ENST00000447199 MPHOSPH9Q99550 1183 aa23.73■■□□□ 1.39
SPTLC1P1-201ENST00000447199 SETD1AO15047 1707 aaKnown RBP23.71■■□□□ 1.39
SPTLC1P1-201ENST00000447199 RGS17Q9UGC6 210 aaPredicted RBP23.71■■□□□ 1.39
SPTLC1P1-201ENST00000447199 PHLPP1O60346 1717 aa23.7■■□□□ 1.39
SPTLC1P1-201ENST00000447199 COL16A1Q07092 1604 aaPredicted RBP23.7■■□□□ 1.39
SPTLC1P1-201ENST00000447199 SPATA31E1Q6ZUB1 1445 aa23.69■■□□□ 1.38
SPTLC1P1-201ENST00000447199 AHDC1Q5TGY3 1603 aaPredicted RBP23.69■■□□□ 1.38
SPTLC1P1-201ENST00000447199 CCDC144AA2RUR9 1427 aa23.68■■□□□ 1.38
SPTLC1P1-201ENST00000447199 PRAG1Q86YV5 1406 aa23.68■■□□□ 1.38
SPTLC1P1-201ENST00000447199 SETD5Q9C0A6 1442 aa23.68■■□□□ 1.38
SPTLC1P1-201ENST00000447199 PPLO60437 1756 aa23.68■■□□□ 1.38
SPTLC1P1-201ENST00000447199 PTCH1Q13635 1447 aa23.67■■□□□ 1.38
SPTLC1P1-201ENST00000447199 ADGRL3Q9HAR2 1447 aa23.67■■□□□ 1.38
SPTLC1P1-201ENST00000447199 JCADQ9P266 1359 aa23.67■■□□□ 1.38
SPTLC1P1-201ENST00000447199 BRINP3Q76B58 766 aa23.67■■□□□ 1.38
SPTLC1P1-201ENST00000447199 MST1RQ04912 1400 aa23.67■■□□□ 1.38
SPTLC1P1-201ENST00000447199 ACIN1Q9UKV3 1341 aaKnown RBP23.65■■□□□ 1.38
SPTLC1P1-201ENST00000447199 ROBO2Q9HCK4 1378 aa23.65■■□□□ 1.38
SPTLC1P1-201ENST00000447199 NALCNQ8IZF0 1738 aa23.62■■□□□ 1.37
SPTLC1P1-201ENST00000447199 ADGRF5Q8IZF2 1346 aa23.61■■□□□ 1.37
SPTLC1P1-201ENST00000447199 ASXL1Q8IXJ9 1541 aa23.61■■□□□ 1.37
SPTLC1P1-201ENST00000447199 RAB3GAP2Q9H2M9 1393 aa23.6■■□□□ 1.37
SPTLC1P1-201ENST00000447199 RGL3Q3MIN7 710 aa23.59■■□□□ 1.37
SPTLC1P1-201ENST00000447199 ANKRD30BQ9BXX2 1392 aa23.59■■□□□ 1.37
SPTLC1P1-201ENST00000447199 IFT172Q9UG01 1749 aa23.57■■□□□ 1.36
SPTLC1P1-201ENST00000447199 SPATA31A6Q5VVP1 1343 aa23.56■■□□□ 1.36
SPTLC1P1-201ENST00000447199 LRP6O75581 1613 aa23.55■■□□□ 1.36
SPTLC1P1-201ENST00000447199 POTEAQ6S8J7 498 aa23.55■■□□□ 1.36
SPTLC1P1-201ENST00000447199 PIK3C2GO75747 1445 aa23.55■■□□□ 1.36
SPTLC1P1-201ENST00000447199 NHSL1Q5SYE7 1610 aa23.55■■□□□ 1.36
SPTLC1P1-201ENST00000447199 SHPRHQ149N8 1683 aa23.54■■□□□ 1.36
SPTLC1P1-201ENST00000447199 C1orf167Q5SNV9 1468 aa23.54■■□□□ 1.36
SPTLC1P1-201ENST00000447199 TECPR2O15040 1411 aa23.52■■□□□ 1.36
SPTLC1P1-201ENST00000447199 LRPPRCP42704 1394 aaKnown RBP23.5■■□□□ 1.35
SPTLC1P1-201ENST00000447199 NRXN1Q9ULB1 1477 aa23.49■■□□□ 1.35
SPTLC1P1-201ENST00000447199 DDX17Q92841 729 aaKnown RBP23.48■■□□□ 1.35
SPTLC1P1-201ENST00000447199 ABCC11Q96J66 1382 aa23.48■■□□□ 1.35
SPTLC1P1-201ENST00000447199 LAMC1P11047 1609 aa23.48■■□□□ 1.35
SPTLC1P1-201ENST00000447199 MYOM2P54296 1465 aa23.46■■□□□ 1.35
SPTLC1P1-201ENST00000447199 CDC42BPGQ6DT37 1551 aa23.45■■□□□ 1.34
SPTLC1P1-201ENST00000447199 HRCP23327 699 aa23.45■■□□□ 1.34
SPTLC1P1-201ENST00000447199 TMEM132EQ6IEE7 984 aa23.45■■□□□ 1.34
SPTLC1P1-201ENST00000447199 LRRC59Q96AG4 307 aaKnown RBP23.45■■□□□ 1.34
SPTLC1P1-201ENST00000447199 ORAI2Q96SN7 254 aa23.45■■□□□ 1.34
SPTLC1P1-201ENST00000447199 C14orf93Q9H972 538 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms