RNA–Protein interactions for RNA: ENST00000447009.1

APTR-205, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 2 BASIC

Gene APTR, Length 902 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-205ENST00000447009 NWD1Q149M9 1564 aa31.62■■■□□ 2.65
APTR-205ENST00000447009 RBM33Q96EV2 1170 aaKnown RBP31.6■■■□□ 2.65
APTR-205ENST00000447009 TMEM131LA2VDJ0 1609 aa31.59■■■□□ 2.65
APTR-205ENST00000447009 E9PCH4 1651 aa31.58■■■□□ 2.65
APTR-205ENST00000447009 PROSER2Q86WR7 435 aaPredicted RBP31.58■■■□□ 2.65
APTR-205ENST00000447009 ZFYVE9O95405 1425 aa31.58■■■□□ 2.65
APTR-205ENST00000447009 NKTRP30414 1462 aaKnown RBP31.57■■■□□ 2.64
APTR-205ENST00000447009 RIMS2Q9UQ26 1411 aa31.57■■■□□ 2.64
APTR-205ENST00000447009 ROBO1Q9Y6N7 1651 aa31.54■■■□□ 2.64
APTR-205ENST00000447009 PPP1R15AO75807 674 aaPredicted RBP31.54■■■□□ 2.64
APTR-205ENST00000447009 IQGAP3Q86VI3 1631 aa31.53■■■□□ 2.64
APTR-205ENST00000447009 FAM135BQ49AJ0 1406 aa31.53■■■□□ 2.64
APTR-205ENST00000447009 ROCK1Q13464 1354 aa31.53■■■□□ 2.64
APTR-205ENST00000447009 PLEKHG1Q9ULL1 1385 aa31.53■■■□□ 2.64
APTR-205ENST00000447009 CHGAP10645 457 aaKnown RBP31.51■■■□□ 2.63
APTR-205ENST00000447009 CHD2O14647 1828 aaKnown RBP31.51■■■□□ 2.63
APTR-205ENST00000447009 ITGAEP38570 1179 aa31.49■■■□□ 2.63
APTR-205ENST00000447009 PPARGC1BQ86YN6 1023 aaKnown RBP31.46■■■□□ 2.63
APTR-205ENST00000447009 MSH6P52701 1360 aa31.45■■■□□ 2.63
APTR-205ENST00000447009 HDGFP51858 240 aaKnown RBP31.44■■■□□ 2.62
APTR-205ENST00000447009 NUTM2DQ5VT03 806 aaPredicted RBP31.43■■■□□ 2.62
APTR-205ENST00000447009 NUP155O75694 1391 aa31.43■■■□□ 2.62
APTR-205ENST00000447009 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.39■■■□□ 2.62
APTR-205ENST00000447009 ADAMTS13Q76LX8 1427 aa31.37■■■□□ 2.61
APTR-205ENST00000447009 DIP2AQ14689 1571 aa31.37■■■□□ 2.61
APTR-205ENST00000447009 PHLPP1O60346 1717 aa31.37■■■□□ 2.61
APTR-205ENST00000447009 RGS17Q9UGC6 210 aaPredicted RBP31.36■■■□□ 2.61
APTR-205ENST00000447009 TBX22Q9Y458 520 aa31.36■■■□□ 2.61
APTR-205ENST00000447009 SPHKAPQ2M3C7 1700 aa31.33■■■□□ 2.61
APTR-205ENST00000447009 SLAIN2Q9P270 581 aa31.33■■■□□ 2.61
APTR-205ENST00000447009 C14orf37Q86TY3 774 aa31.31■■■□□ 2.6
APTR-205ENST00000447009 TRPM2O94759 1503 aa31.29■■■□□ 2.6
APTR-205ENST00000447009 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.27■■■□□ 2.6
APTR-205ENST00000447009 NCOA3Q9Y6Q9 1424 aa31.25■■■□□ 2.59
APTR-205ENST00000447009 PIK3R4Q99570 1358 aa31.25■■■□□ 2.59
APTR-205ENST00000447009 COL16A1Q07092 1604 aaPredicted RBP31.24■■■□□ 2.59
APTR-205ENST00000447009 NRXN3Q9Y4C0 1643 aa31.24■■■□□ 2.59
APTR-205ENST00000447009 PTPRUQ92729 1446 aa31.23■■■□□ 2.59
APTR-205ENST00000447009 JCADQ9P266 1359 aa31.2■■■□□ 2.59
APTR-205ENST00000447009 POTEAQ6S8J7 498 aa31.2■■■□□ 2.59
APTR-205ENST00000447009 AMOTL2Q9Y2J4 779 aa31.19■■■□□ 2.58
APTR-205ENST00000447009 SETBP1Q9Y6X0 1596 aa31.18■■■□□ 2.58
APTR-205ENST00000447009 CLTCL1P53675 1640 aa31.18■■■□□ 2.58
APTR-205ENST00000447009 ZNF326Q5BKZ1 582 aaKnown RBP31.18■■■□□ 2.58
APTR-205ENST00000447009 CADPS2Q86UW7 1296 aa31.17■■■□□ 2.58
APTR-205ENST00000447009 XRN1Q8IZH2 1706 aaKnown RBP31.17■■■□□ 2.58
APTR-205ENST00000447009 ATF3P18847 181 aa31.16■■■□□ 2.58
APTR-205ENST00000447009 C19orf44Q9H6X5 657 aa31.16■■■□□ 2.58
APTR-205ENST00000447009 RRBP1Q9P2E9 1410 aaKnown RBP31.15■■■□□ 2.58
APTR-205ENST00000447009 AHDC1Q5TGY3 1603 aaPredicted RBP31.13■■■□□ 2.57
APTR-205ENST00000447009 KIF1BO60333 1816 aa31.1■■■□□ 2.57
APTR-205ENST00000447009 NEXMIFQ5QGS0 1516 aa31.1■■■□□ 2.57
APTR-205ENST00000447009 NAIPQ13075 1403 aa31.1■■■□□ 2.57
APTR-205ENST00000447009 LRP6O75581 1613 aa31.09■■■□□ 2.57
APTR-205ENST00000447009 SETD1AO15047 1707 aaKnown RBP31.08■■■□□ 2.57
APTR-205ENST00000447009 METP08581 1390 aa31.07■■■□□ 2.56
APTR-205ENST00000447009 SHPRHQ149N8 1683 aa31.07■■■□□ 2.56
APTR-205ENST00000447009 DCCP43146 1447 aa31.06■■■□□ 2.56
APTR-205ENST00000447009 BRINP3Q76B58 766 aa31.04■■■□□ 2.56
APTR-205ENST00000447009 SPATA31A6Q5VVP1 1343 aa31.02■■■□□ 2.56
APTR-205ENST00000447009 MEX3CQ5U5Q3 659 aaKnown RBP31.02■■■□□ 2.56
APTR-205ENST00000447009 ASXL1Q8IXJ9 1541 aa31.02■■■□□ 2.56
APTR-205ENST00000447009 NALCNQ8IZF0 1738 aa31■■■□□ 2.55
APTR-205ENST00000447009 MST1RQ04912 1400 aa30.99■■■□□ 2.55
APTR-205ENST00000447009 TRIM52Q96A61 297 aa30.99■■■□□ 2.55
APTR-205ENST00000447009 NHSL1Q5SYE7 1610 aa30.97■■■□□ 2.55
APTR-205ENST00000447009 HFM1A2PYH4 1435 aa30.96■■■□□ 2.55
APTR-205ENST00000447009 ADGRL3Q9HAR2 1447 aa30.96■■■□□ 2.55
APTR-205ENST00000447009 NUTM2BA6NNL0 878 aaPredicted RBP30.91■■■□□ 2.54
APTR-205ENST00000447009 NUTM2EB1AL46 878 aaPredicted RBP30.91■■■□□ 2.54
APTR-205ENST00000447009 NUTM2AQ8IVF1 878 aaPredicted RBP30.91■■■□□ 2.54
APTR-205ENST00000447009 PPLO60437 1756 aa30.88■■■□□ 2.53
APTR-205ENST00000447009 SLC4A1APQ9BWU0 796 aaKnown RBP30.88■■■□□ 2.53
APTR-205ENST00000447009 SETD5Q9C0A6 1442 aa30.88■■■□□ 2.53
APTR-205ENST00000447009 ZNF772Q68DY9 489 aaPredicted RBP30.87■■■□□ 2.53
APTR-205ENST00000447009 DDX17Q92841 729 aaKnown RBP30.86■■■□□ 2.53
APTR-205ENST00000447009 PTCH1Q13635 1447 aa30.85■■■□□ 2.53
APTR-205ENST00000447009 VGFO15240 615 aaPredicted RBP30.84■■■□□ 2.53
APTR-205ENST00000447009 ROBO2Q9HCK4 1378 aa30.82■■■□□ 2.52
APTR-205ENST00000447009 C1orf167Q5SNV9 1468 aa30.81■■■□□ 2.52
APTR-205ENST00000447009 FOXD1Q16676 465 aa30.79■■■□□ 2.52
APTR-205ENST00000447009 LRRC59Q96AG4 307 aaKnown RBP30.79■■■□□ 2.52
APTR-205ENST00000447009 RPGRIP1LQ68CZ1 1315 aa30.78■■■□□ 2.52
APTR-205ENST00000447009 PNPLA6Q8IY17 1366 aa30.78■■■□□ 2.52
APTR-205ENST00000447009 AFF2P51816 1311 aa30.76■■■□□ 2.52
APTR-205ENST00000447009 PRAG1Q86YV5 1406 aa30.74■■■□□ 2.51
APTR-205ENST00000447009 RXRBP28702 533 aa30.73■■■□□ 2.51
APTR-205ENST00000447009 LAMC1P11047 1609 aa30.73■■■□□ 2.51
APTR-205ENST00000447009 C8orf37Q96NL8 207 aa30.71■■■□□ 2.51
APTR-205ENST00000447009 ORAI2Q96SN7 254 aa30.7■■■□□ 2.51
APTR-205ENST00000447009 CCDC144AA2RUR9 1427 aa30.7■■■□□ 2.5
APTR-205ENST00000447009 IFT172Q9UG01 1749 aa30.68■■■□□ 2.5
APTR-205ENST00000447009 ADGRF5Q8IZF2 1346 aa30.67■■■□□ 2.5
APTR-205ENST00000447009 CDK12Q9NYV4 1490 aaPredicted RBP30.65■■■□□ 2.5
APTR-205ENST00000447009 RGL3Q3MIN7 710 aa30.65■■■□□ 2.5
APTR-205ENST00000447009 CDC42BPGQ6DT37 1551 aa30.64■■■□□ 2.5
APTR-205ENST00000447009 ADAMTS2O95450 1211 aa30.64■■■□□ 2.5
APTR-205ENST00000447009 UPF1Q92900 1129 aaKnown RBP eCLIP30.64■■■□□ 2.5
APTR-205ENST00000447009 SOS2Q07890 1332 aaPredicted RBP30.63■■■□□ 2.49
APTR-205ENST00000447009 SPATA31E1Q6ZUB1 1445 aa30.63■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms