RNA–Protein interactions for RNA: ENST00000445721.5

NUP50-211, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-211ENST00000445721 ADGRB3O60242 1522 aa37.05■■■■□ 3.52
NUP50-211ENST00000445721 SLAIN2Q9P270 581 aa37.04■■■■□ 3.52
NUP50-211ENST00000445721 NWD1Q149M9 1564 aa37■■■■□ 3.51
NUP50-211ENST00000445721 JCADQ9P266 1359 aa36.94■■■■□ 3.5
NUP50-211ENST00000445721 PPP1R15AO75807 674 aaPredicted RBP36.94■■■■□ 3.5
NUP50-211ENST00000445721 PHLPP1O60346 1717 aa36.93■■■■□ 3.5
NUP50-211ENST00000445721 PLEKHG1Q9ULL1 1385 aa36.91■■■■□ 3.5
NUP50-211ENST00000445721 HDGFP51858 240 aaKnown RBP36.91■■■■□ 3.5
NUP50-211ENST00000445721 ZFYVE9O95405 1425 aa36.9■■■■□ 3.5
NUP50-211ENST00000445721 RIMS2Q9UQ26 1411 aa36.89■■■■□ 3.5
NUP50-211ENST00000445721 RPRD2Q5VT52 1461 aaKnown RBP36.88■■■■□ 3.49
NUP50-211ENST00000445721 ADGRL2O95490 1459 aa36.87■■■■□ 3.49
NUP50-211ENST00000445721 CHD2O14647 1828 aaKnown RBP36.85■■■■□ 3.49
NUP50-211ENST00000445721 FAM50AQ14320 339 aaKnown RBP36.85■■■■□ 3.49
NUP50-211ENST00000445721 C14orf37Q86TY3 774 aa36.85■■■■□ 3.49
NUP50-211ENST00000445721 ANKRD50Q9ULJ7 1429 aa36.85■■■■□ 3.49
NUP50-211ENST00000445721 TBX22Q9Y458 520 aa36.84■■■■□ 3.49
NUP50-211ENST00000445721 MYO5BQ9ULV0 1848 aa36.83■■■■□ 3.49
NUP50-211ENST00000445721 CHGAP10645 457 aaKnown RBP36.82■■■■□ 3.48
NUP50-211ENST00000445721 SETD1AO15047 1707 aaKnown RBP36.81■■■■□ 3.48
NUP50-211ENST00000445721 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.79■■■■□ 3.48
NUP50-211ENST00000445721 GCC2Q8IWJ2 1684 aa36.78■■■■□ 3.48
NUP50-211ENST00000445721 NUTM2DQ5VT03 806 aaPredicted RBP36.78■■■■□ 3.48
NUP50-211ENST00000445721 TMEM131LA2VDJ0 1609 aa36.77■■■■□ 3.48
NUP50-211ENST00000445721 NCOA3Q9Y6Q9 1424 aa36.77■■■■□ 3.48
NUP50-211ENST00000445721 MEX3CQ5U5Q3 659 aaKnown RBP36.77■■■■□ 3.48
NUP50-211ENST00000445721 COL16A1Q07092 1604 aaPredicted RBP36.77■■■■□ 3.48
NUP50-211ENST00000445721 SPATA31A6Q5VVP1 1343 aa36.74■■■■□ 3.47
NUP50-211ENST00000445721 ATF3P18847 181 aa36.73■■■■□ 3.47
NUP50-211ENST00000445721 CADPS2Q86UW7 1296 aa36.73■■■■□ 3.47
NUP50-211ENST00000445721 C19orf44Q9H6X5 657 aa36.73■■■■□ 3.47
NUP50-211ENST00000445721 LRP6O75581 1613 aa36.71■■■■□ 3.47
NUP50-211ENST00000445721 ADAMTS13Q76LX8 1427 aa36.69■■■■□ 3.46
NUP50-211ENST00000445721 ZNF772Q68DY9 489 aaPredicted RBP36.69■■■■□ 3.46
NUP50-211ENST00000445721 TRIM52Q96A61 297 aa36.67■■■■□ 3.46
NUP50-211ENST00000445721 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.65■■■■□ 3.46
NUP50-211ENST00000445721 PIK3R4Q99570 1358 aa36.64■■■■□ 3.46
NUP50-211ENST00000445721 UPF1Q92900 1129 aaKnown RBP eCLIP36.62■■■■□ 3.45
NUP50-211ENST00000445721 AHDC1Q5TGY3 1603 aaPredicted RBP36.62■■■■□ 3.45
NUP50-211ENST00000445721 AMOTL2Q9Y2J4 779 aa36.61■■■■□ 3.45
NUP50-211ENST00000445721 DIP2AQ14689 1571 aa36.61■■■■□ 3.45
NUP50-211ENST00000445721 UNC13BO14795 1591 aa36.58■■■■□ 3.45
NUP50-211ENST00000445721 BRINP3Q76B58 766 aa36.58■■■■□ 3.45
NUP50-211ENST00000445721 NUTM2BA6NNL0 878 aaPredicted RBP36.57■■■■□ 3.44
NUP50-211ENST00000445721 NUTM2EB1AL46 878 aaPredicted RBP36.57■■■■□ 3.44
NUP50-211ENST00000445721 NUTM2AQ8IVF1 878 aaPredicted RBP36.57■■■■□ 3.44
NUP50-211ENST00000445721 E9PCH4 1651 aa36.57■■■■□ 3.44
NUP50-211ENST00000445721 SHPRHQ149N8 1683 aa36.56■■■■□ 3.44
NUP50-211ENST00000445721 RXRBP28702 533 aa36.55■■■■□ 3.44
NUP50-211ENST00000445721 PTPRUQ92729 1446 aa36.54■■■■□ 3.44
NUP50-211ENST00000445721 TRPM2O94759 1503 aa36.53■■■■□ 3.44
NUP50-211ENST00000445721 NUP155O75694 1391 aa36.47■■■■□ 3.43
NUP50-211ENST00000445721 IQGAP3Q86VI3 1631 aa36.45■■■■□ 3.43
NUP50-211ENST00000445721 ROCK1Q13464 1354 aa36.45■■■■□ 3.43
NUP50-211ENST00000445721 DCCP43146 1447 aa36.44■■■■□ 3.42
NUP50-211ENST00000445721 AFF2P51816 1311 aa36.43■■■■□ 3.42
NUP50-211ENST00000445721 ASXL1Q8IXJ9 1541 aa36.41■■■■□ 3.42
NUP50-211ENST00000445721 SETD5Q9C0A6 1442 aa36.39■■■■□ 3.42
NUP50-211ENST00000445721 ZNF326Q5BKZ1 582 aaKnown RBP36.38■■■■□ 3.41
NUP50-211ENST00000445721 LRRC59Q96AG4 307 aaKnown RBP36.38■■■■□ 3.41
NUP50-211ENST00000445721 CDK12Q9NYV4 1490 aaPredicted RBP36.37■■■■□ 3.41
NUP50-211ENST00000445721 MST1RQ04912 1400 aa36.37■■■■□ 3.41
NUP50-211ENST00000445721 ITGAEP38570 1179 aa36.36■■■■□ 3.41
NUP50-211ENST00000445721 XRN1Q8IZH2 1706 aaKnown RBP36.34■■■■□ 3.41
NUP50-211ENST00000445721 DDX17Q92841 729 aaKnown RBP36.34■■■■□ 3.41
NUP50-211ENST00000445721 METP08581 1390 aa36.34■■■■□ 3.41
NUP50-211ENST00000445721 C8orf37Q96NL8 207 aa36.33■■■■□ 3.41
NUP50-211ENST00000445721 NRXN3Q9Y4C0 1643 aa36.33■■■■□ 3.41
NUP50-211ENST00000445721 SETBP1Q9Y6X0 1596 aa36.32■■■■□ 3.41
NUP50-211ENST00000445721 QTRT2Q9H974 415 aaKnown RBP36.3■■■■□ 3.4
NUP50-211ENST00000445721 NHSL1Q5SYE7 1610 aa36.29■■■■□ 3.4
NUP50-211ENST00000445721 RBM6P78332 1123 aaKnown RBP36.26■■■■□ 3.4
NUP50-211ENST00000445721 PNPLA6Q8IY17 1366 aa36.26■■■■□ 3.39
NUP50-211ENST00000445721 ADGRL3Q9HAR2 1447 aa36.25■■■■□ 3.39
NUP50-211ENST00000445721 RGS12O14924 1447 aa36.22■■■■□ 3.39
NUP50-211ENST00000445721 SPHKAPQ2M3C7 1700 aa36.21■■■■□ 3.39
NUP50-211ENST00000445721 ADAMTS2O95450 1211 aa36.2■■■■□ 3.39
NUP50-211ENST00000445721 NGLY1Q96IV0 654 aa36.2■■■■□ 3.39
NUP50-211ENST00000445721 NALCNQ8IZF0 1738 aa36.14■■■■□ 3.38
NUP50-211ENST00000445721 C1orf167Q5SNV9 1468 aa36.13■■■■□ 3.37
NUP50-211ENST00000445721 NEXMIFQ5QGS0 1516 aa36.11■■■■□ 3.37
NUP50-211ENST00000445721 ORAI2Q96SN7 254 aa36.09■■■■□ 3.37
NUP50-211ENST00000445721 PPARGC1BQ86YN6 1023 aaKnown RBP36.08■■■■□ 3.37
NUP50-211ENST00000445721 CLTCL1P53675 1640 aa36.08■■■■□ 3.37
NUP50-211ENST00000445721 SRCAPQ6ZRS2 3230 aa36.07■■■■□ 3.37
NUP50-211ENST00000445721 SOS2Q07890 1332 aaPredicted RBP36.06■■■■□ 3.36
NUP50-211ENST00000445721 USP21Q9UK80 565 aa36.05■■■■□ 3.36
NUP50-211ENST00000445721 ROBO2Q9HCK4 1378 aa36.03■■■■□ 3.36
NUP50-211ENST00000445721 VGFO15240 615 aaPredicted RBP36.01■■■■□ 3.36
NUP50-211ENST00000445721 ATAD2Q6PL18 1390 aa36.01■■■■□ 3.35
NUP50-211ENST00000445721 PTCH1Q13635 1447 aa36■■■■□ 3.35
NUP50-211ENST00000445721 TRPC5Q9UL62 973 aaPredicted RBP36■■■■□ 3.35
NUP50-211ENST00000445721 LAMC1P11047 1609 aa35.98■■■■□ 3.35
NUP50-211ENST00000445721 KIF1BO60333 1816 aa35.97■■■■□ 3.35
NUP50-211ENST00000445721 FNBP4Q8N3X1 1017 aaPredicted RBP35.96■■■■□ 3.35
NUP50-211ENST00000445721 ATRNO75882 1429 aa35.89■■■■□ 3.34
NUP50-211ENST00000445721 ESCO1Q5FWF5 840 aa35.88■■■■□ 3.33
NUP50-211ENST00000445721 HFM1A2PYH4 1435 aa35.88■■■■□ 3.33
NUP50-211ENST00000445721 RPGRIP1LQ68CZ1 1315 aa35.87■■■■□ 3.33
NUP50-211ENST00000445721 NPHP3Q7Z494 1330 aa35.85■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms