RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 OATP04181 439 aa8.72□□□□□ -1.01
TM9SF3-202ENST00000443638 PXYLP1Q8TE99 480 aa8.72□□□□□ -1.01
TM9SF3-202ENST00000443638 PTCD2Q8WV60 388 aaKnown RBP8.72□□□□□ -1.01
TM9SF3-202ENST00000443638 NLRP7Q8WX94 980 aa8.72□□□□□ -1.01
TM9SF3-202ENST00000443638 PBXIP1Q96AQ6 731 aa8.72□□□□□ -1.01
TM9SF3-202ENST00000443638 ATP1B4Q9UN42 357 aaPredicted RBP8.72□□□□□ -1.01
TM9SF3-202ENST00000443638 ACIN1Q9UKV3 1341 aaKnown RBP8.72□□□□□ -1.01
TM9SF3-202ENST00000443638 SRPK2P78362 688 aaKnown RBP8.71□□□□□ -1.02
TM9SF3-202ENST00000443638 DIXDC1Q155Q3 683 aa8.71□□□□□ -1.02
TM9SF3-202ENST00000443638 ADGRG1Q9Y653 693 aa8.71□□□□□ -1.02
TM9SF3-202ENST00000443638 MAP3K7O43318 606 aa8.7□□□□□ -1.02
TM9SF3-202ENST00000443638 TSR1Q2NL82 804 aaKnown RBP8.7□□□□□ -1.02
TM9SF3-202ENST00000443638 FAM161AQ3B820 660 aa8.7□□□□□ -1.02
TM9SF3-202ENST00000443638 WWC1Q8IX03 1113 aa8.7□□□□□ -1.02
TM9SF3-202ENST00000443638 ABL2P42684 1182 aa8.68□□□□□ -1.02
TM9SF3-202ENST00000443638 TTC13Q8NBP0 860 aa8.68□□□□□ -1.02
TM9SF3-202ENST00000443638 AMOTL2Q9Y2J4 779 aa8.68□□□□□ -1.02
TM9SF3-202ENST00000443638 E9PSI1 815 aa8.67□□□□□ -1.02
TM9SF3-202ENST00000443638 SPTLC1O15269 473 aa8.67□□□□□ -1.02
TM9SF3-202ENST00000443638 ADAMTS19Q8TE59 1207 aa8.67□□□□□ -1.02
TM9SF3-202ENST00000443638 MARVELD3Q96A59 401 aa8.67□□□□□ -1.02
TM9SF3-202ENST00000443638 TBC1D2BQ9UPU7 963 aa8.67□□□□□ -1.02
TM9SF3-202ENST00000443638 PCDHGA10Q9Y5H3 936 aa8.67□□□□□ -1.02
TM9SF3-202ENST00000443638 CFAP70Q5T0N1 1121 aa8.66□□□□□ -1.02
TM9SF3-202ENST00000443638 RIC3Q7Z5B4 369 aa8.66□□□□□ -1.02
TM9SF3-202ENST00000443638 SPNS2Q8IVW8 549 aa8.66□□□□□ -1.02
TM9SF3-202ENST00000443638 SPIRE2Q8WWL2 714 aa8.66□□□□□ -1.02
TM9SF3-202ENST00000443638 SLC34A2O95436 690 aa8.65□□□□□ -1.02
TM9SF3-202ENST00000443638 RBM33Q96EV2 1170 aaKnown RBP8.65□□□□□ -1.02
TM9SF3-202ENST00000443638 MMRN1Q13201 1228 aa8.64□□□□□ -1.03
TM9SF3-202ENST00000443638 PADI6Q6TGC4 694 aa8.64□□□□□ -1.03
TM9SF3-202ENST00000443638 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.63□□□□□ -1.03
TM9SF3-202ENST00000443638 G3V3G9 751 aa8.63□□□□□ -1.03
TM9SF3-202ENST00000443638 EMP3P54852 163 aa8.63□□□□□ -1.03
TM9SF3-202ENST00000443638 TYW1BQ6NUM6 668 aa8.63□□□□□ -1.03
TM9SF3-202ENST00000443638 RSBN1LQ6PCB5 846 aaPredicted RBP8.63□□□□□ -1.03
TM9SF3-202ENST00000443638 PRM3Q9NNZ6 103 aa8.63□□□□□ -1.03
TM9SF3-202ENST00000443638 RBM27Q9P2N5 1060 aaKnown RBP8.63□□□□□ -1.03
TM9SF3-202ENST00000443638 GPR37L1O60883 481 aa8.62□□□□□ -1.03
TM9SF3-202ENST00000443638 LILRB3O75022 631 aa8.62□□□□□ -1.03
TM9SF3-202ENST00000443638 GJA5P36382 358 aa8.62□□□□□ -1.03
TM9SF3-202ENST00000443638 CERKQ8TCT0 537 aa8.62□□□□□ -1.03
TM9SF3-202ENST00000443638 GJD4Q96KN9 370 aaPredicted RBP8.62□□□□□ -1.03
TM9SF3-202ENST00000443638 CSB-PGBD3P0DP91 1061 aa8.61□□□□□ -1.03
TM9SF3-202ENST00000443638 HDGFL1Q5TGJ6 251 aa8.61□□□□□ -1.03
TM9SF3-202ENST00000443638 SHROOM4Q9ULL8 1493 aa8.61□□□□□ -1.03
TM9SF3-202ENST00000443638 CD46P15529 392 aa8.6□□□□□ -1.03
TM9SF3-202ENST00000443638 QPCTQ16769 361 aa8.6□□□□□ -1.03
TM9SF3-202ENST00000443638 SND1Q7KZF4 910 aaKnown RBP eCLIP8.6□□□□□ -1.03
TM9SF3-202ENST00000443638 CCDC27Q2M243 656 aa8.59□□□□□ -1.03
TM9SF3-202ENST00000443638 ZNF710Q8N1W2 664 aa8.59□□□□□ -1.03
TM9SF3-202ENST00000443638 IVNS1ABPQ9Y6Y0 642 aa8.59□□□□□ -1.03
TM9SF3-202ENST00000443638 KDM4FA0A1W2PPD8 638 aa8.58□□□□□ -1.04
TM9SF3-202ENST00000443638 USP17L8P0C7I0 530 aa8.58□□□□□ -1.04
TM9SF3-202ENST00000443638 JPH4Q96JJ6 628 aa8.58□□□□□ -1.04
TM9SF3-202ENST00000443638 PPP1R12CQ9BZL4 782 aa8.58□□□□□ -1.04
TM9SF3-202ENST00000443638 CARNS1A5YM72 827 aa8.57□□□□□ -1.04
TM9SF3-202ENST00000443638 MOXD2PA6NHM9 499 aa8.57□□□□□ -1.04
TM9SF3-202ENST00000443638 AP1G2O75843 785 aa8.57□□□□□ -1.04
TM9SF3-202ENST00000443638 RTL5Q5HYW3 569 aaPredicted RBP8.57□□□□□ -1.04
TM9SF3-202ENST00000443638 HS3ST6Q96QI5 342 aa8.57□□□□□ -1.04
TM9SF3-202ENST00000443638 NDUFB9Q9Y6M9 179 aa8.57□□□□□ -1.04
TM9SF3-202ENST00000443638 TMEM88BA6NKF7 163 aa8.56□□□□□ -1.04
TM9SF3-202ENST00000443638 RFX1P22670 979 aa8.56□□□□□ -1.04
TM9SF3-202ENST00000443638 PCDHB15Q9Y5E8 787 aa8.56□□□□□ -1.04
TM9SF3-202ENST00000443638 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.55□□□□□ -1.04
TM9SF3-202ENST00000443638 FAM205CA6NFA0 338 aa8.55□□□□□ -1.04
TM9SF3-202ENST00000443638 WASHC4Q2M389 1173 aa8.55□□□□□ -1.04
TM9SF3-202ENST00000443638 C6orf132Q5T0Z8 1188 aa8.55□□□□□ -1.04
TM9SF3-202ENST00000443638 RBM46Q8TBY0 533 aaKnown RBP8.55□□□□□ -1.04
TM9SF3-202ENST00000443638 POTEB3A0JP26 581 aa8.54□□□□□ -1.04
TM9SF3-202ENST00000443638 PALM3A6NDB9 673 aaPredicted RBP8.54□□□□□ -1.04
TM9SF3-202ENST00000443638 HOXB3P14651 431 aaPredicted RBP8.54□□□□□ -1.04
TM9SF3-202ENST00000443638 FOSBP53539 338 aa8.54□□□□□ -1.04
TM9SF3-202ENST00000443638 POTEBQ6S5H4 581 aa8.54□□□□□ -1.04
TM9SF3-202ENST00000443638 KRTAP3-3Q9BYR6 98 aa8.54□□□□□ -1.04
TM9SF3-202ENST00000443638 KRTAP3-2Q9BYR7 98 aa8.54□□□□□ -1.04
TM9SF3-202ENST00000443638 ALG2Q9H553 416 aa8.54□□□□□ -1.04
TM9SF3-202ENST00000443638 VRTNQ9H8Y1 702 aa8.54□□□□□ -1.04
TM9SF3-202ENST00000443638 GNEQ9Y223 722 aaKnown RBP8.54□□□□□ -1.04
TM9SF3-202ENST00000443638 ATG7O95352 703 aa8.53□□□□□ -1.04
TM9SF3-202ENST00000443638 NDUFV2P19404 249 aa8.53□□□□□ -1.04
TM9SF3-202ENST00000443638 CSPP1Q1MSJ5 1256 aa8.53□□□□□ -1.04
TM9SF3-202ENST00000443638 PRPF38BQ5VTL8 546 aaKnown RBP8.53□□□□□ -1.04
TM9SF3-202ENST00000443638 UCN2Q96RP3 112 aa8.53□□□□□ -1.04
TM9SF3-202ENST00000443638 TRIM34Q9BYJ4 488 aa8.53□□□□□ -1.04
TM9SF3-202ENST00000443638 IGSF5Q9NSI5 407 aa8.53□□□□□ -1.04
TM9SF3-202ENST00000443638 UNCXA6NJT0 531 aa8.52□□□□□ -1.05
TM9SF3-202ENST00000443638 PRSS12P56730 875 aa8.52□□□□□ -1.05
TM9SF3-202ENST00000443638 EYA1Q99502 592 aa8.52□□□□□ -1.05
TM9SF3-202ENST00000443638 RCCD1A6NED2 376 aa8.51□□□□□ -1.05
TM9SF3-202ENST00000443638 NUTM1Q86Y26 1132 aa8.51□□□□□ -1.05
TM9SF3-202ENST00000443638 CABLES1Q8TDN4 633 aa8.51□□□□□ -1.05
TM9SF3-202ENST00000443638 HOXB1P14653 301 aaPredicted RBP8.5□□□□□ -1.05
TM9SF3-202ENST00000443638 DOK7Q18PE1 504 aa8.5□□□□□ -1.05
TM9SF3-202ENST00000443638 SULF1Q8IWU6 871 aa8.5□□□□□ -1.05
TM9SF3-202ENST00000443638 HMX1Q9NP08 348 aaPredicted RBP8.5□□□□□ -1.05
TM9SF3-202ENST00000443638 PCDHGA4Q9Y5G9 962 aa8.5□□□□□ -1.05
TM9SF3-202ENST00000443638 RBM47A0AV96 593 aaKnown RBP8.49□□□□□ -1.05
TM9SF3-202ENST00000443638 FAM198AQ9UFP1 575 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms