RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 MYO5BQ9ULV0 1848 aa21.22■□□□□ 0.99
PTPRE-203ENST00000442830 FAM135BQ49AJ0 1406 aa21.22■□□□□ 0.99
PTPRE-203ENST00000442830 IQGAP3Q86VI3 1631 aa21.22■□□□□ 0.99
PTPRE-203ENST00000442830 TMEM131LA2VDJ0 1609 aa21.21■□□□□ 0.99
PTPRE-203ENST00000442830 TMEM94Q12767 1356 aa21.21■□□□□ 0.99
PTPRE-203ENST00000442830 PLEKHG1Q9ULL1 1385 aa21.21■□□□□ 0.99
PTPRE-203ENST00000442830 ZFYVE9O95405 1425 aa21.21■□□□□ 0.99
PTPRE-203ENST00000442830 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.2■□□□□ 0.98
PTPRE-203ENST00000442830 E9PCH4 1651 aa21.18■□□□□ 0.98
PTPRE-203ENST00000442830 CHD2O14647 1828 aaKnown RBP21.18■□□□□ 0.98
PTPRE-203ENST00000442830 PPP1R15AO75807 674 aaPredicted RBP21.18■□□□□ 0.98
PTPRE-203ENST00000442830 PROSER2Q86WR7 435 aaPredicted RBP21.18■□□□□ 0.98
PTPRE-203ENST00000442830 BCANQ96GW7 911 aa21.18■□□□□ 0.98
PTPRE-203ENST00000442830 DIP2AQ14689 1571 aa21.18■□□□□ 0.98
PTPRE-203ENST00000442830 SLC26A8Q96RN1 970 aa21.17■□□□□ 0.98
PTPRE-203ENST00000442830 RIMS2Q9UQ26 1411 aa21.17■□□□□ 0.98
PTPRE-203ENST00000442830 MSH6P52701 1360 aa21.16■□□□□ 0.98
PTPRE-203ENST00000442830 NCOA3Q9Y6Q9 1424 aa21.15■□□□□ 0.98
PTPRE-203ENST00000442830 ROBO1Q9Y6N7 1651 aa21.15■□□□□ 0.98
PTPRE-203ENST00000442830 PIK3R4Q99570 1358 aa21.12■□□□□ 0.97
PTPRE-203ENST00000442830 TBX22Q9Y458 520 aa21.11■□□□□ 0.97
PTPRE-203ENST00000442830 NUP155O75694 1391 aa21.1■□□□□ 0.97
PTPRE-203ENST00000442830 CHGAP10645 457 aaKnown RBP21.08■□□□□ 0.97
PTPRE-203ENST00000442830 SPHKAPQ2M3C7 1700 aa21.07■□□□□ 0.96
PTPRE-203ENST00000442830 TRPM2O94759 1503 aa21.06■□□□□ 0.96
PTPRE-203ENST00000442830 PHLPP1O60346 1717 aa21.04■□□□□ 0.96
PTPRE-203ENST00000442830 SLAIN2Q9P270 581 aa21.04■□□□□ 0.96
PTPRE-203ENST00000442830 ADAMTS13Q76LX8 1427 aa21.03■□□□□ 0.96
PTPRE-203ENST00000442830 CADPS2Q86UW7 1296 aa21■□□□□ 0.95
PTPRE-203ENST00000442830 JCADQ9P266 1359 aa20.99■□□□□ 0.95
PTPRE-203ENST00000442830 ITGAEP38570 1179 aa20.99■□□□□ 0.95
PTPRE-203ENST00000442830 C14orf37Q86TY3 774 aa20.99■□□□□ 0.95
PTPRE-203ENST00000442830 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.98■□□□□ 0.95
PTPRE-203ENST00000442830 SETBP1Q9Y6X0 1596 aa20.98■□□□□ 0.95
PTPRE-203ENST00000442830 RBM33Q96EV2 1170 aaKnown RBP20.98■□□□□ 0.95
PTPRE-203ENST00000442830 C19orf44Q9H6X5 657 aa20.97■□□□□ 0.95
PTPRE-203ENST00000442830 DCCP43146 1447 aa20.96■□□□□ 0.95
PTPRE-203ENST00000442830 RRBP1Q9P2E9 1410 aaKnown RBP20.96■□□□□ 0.95
PTPRE-203ENST00000442830 ATF3P18847 181 aa20.96■□□□□ 0.95
PTPRE-203ENST00000442830 KIF1BO60333 1816 aa20.95■□□□□ 0.94
PTPRE-203ENST00000442830 COL16A1Q07092 1604 aaPredicted RBP20.94■□□□□ 0.94
PTPRE-203ENST00000442830 AHDC1Q5TGY3 1603 aaPredicted RBP20.94■□□□□ 0.94
PTPRE-203ENST00000442830 XRN1Q8IZH2 1706 aaKnown RBP20.93■□□□□ 0.94
PTPRE-203ENST00000442830 RGS17Q9UGC6 210 aaPredicted RBP20.93■□□□□ 0.94
PTPRE-203ENST00000442830 NUTM2DQ5VT03 806 aaPredicted RBP20.92■□□□□ 0.94
PTPRE-203ENST00000442830 AMOTL2Q9Y2J4 779 aa20.92■□□□□ 0.94
PTPRE-203ENST00000442830 NRXN3Q9Y4C0 1643 aa20.92■□□□□ 0.94
PTPRE-203ENST00000442830 ZNF326Q5BKZ1 582 aaKnown RBP20.91■□□□□ 0.94
PTPRE-203ENST00000442830 SPATA31A6Q5VVP1 1343 aa20.91■□□□□ 0.94
PTPRE-203ENST00000442830 SHPRHQ149N8 1683 aa20.9■□□□□ 0.94
PTPRE-203ENST00000442830 CLTCL1P53675 1640 aa20.89■□□□□ 0.93
PTPRE-203ENST00000442830 NAIPQ13075 1403 aa20.87■□□□□ 0.93
PTPRE-203ENST00000442830 PTPRUQ92729 1446 aa20.87■□□□□ 0.93
PTPRE-203ENST00000442830 NEXMIFQ5QGS0 1516 aa20.87■□□□□ 0.93
PTPRE-203ENST00000442830 HFM1A2PYH4 1435 aa20.85■□□□□ 0.93
PTPRE-203ENST00000442830 PPARGC1BQ86YN6 1023 aaKnown RBP20.84■□□□□ 0.93
PTPRE-203ENST00000442830 POTEAQ6S8J7 498 aa20.82■□□□□ 0.92
PTPRE-203ENST00000442830 ADGRL3Q9HAR2 1447 aa20.81■□□□□ 0.92
PTPRE-203ENST00000442830 VGFO15240 615 aaPredicted RBP20.81■□□□□ 0.92
PTPRE-203ENST00000442830 ASXL1Q8IXJ9 1541 aa20.81■□□□□ 0.92
PTPRE-203ENST00000442830 NHSL1Q5SYE7 1610 aa20.8■□□□□ 0.92
PTPRE-203ENST00000442830 MEX3CQ5U5Q3 659 aaKnown RBP20.8■□□□□ 0.92
PTPRE-203ENST00000442830 ZNF772Q68DY9 489 aaPredicted RBP20.8■□□□□ 0.92
PTPRE-203ENST00000442830 BRINP3Q76B58 766 aa20.8■□□□□ 0.92
PTPRE-203ENST00000442830 RPGRIP1LQ68CZ1 1315 aa20.79■□□□□ 0.92
PTPRE-203ENST00000442830 METP08581 1390 aa20.79■□□□□ 0.92
PTPRE-203ENST00000442830 MST1RQ04912 1400 aa20.78■□□□□ 0.92
PTPRE-203ENST00000442830 PTCH1Q13635 1447 aa20.78■□□□□ 0.92
PTPRE-203ENST00000442830 SETD1AO15047 1707 aaKnown RBP20.78■□□□□ 0.92
PTPRE-203ENST00000442830 SETD5Q9C0A6 1442 aa20.78■□□□□ 0.92
PTPRE-203ENST00000442830 TRIM52Q96A61 297 aa20.77■□□□□ 0.92
PTPRE-203ENST00000442830 NALCNQ8IZF0 1738 aa20.77■□□□□ 0.92
PTPRE-203ENST00000442830 PRAG1Q86YV5 1406 aa20.77■□□□□ 0.91
PTPRE-203ENST00000442830 LRP6O75581 1613 aa20.76■□□□□ 0.91
PTPRE-203ENST00000442830 PPLO60437 1756 aa20.75■□□□□ 0.91
PTPRE-203ENST00000442830 SLC4A1APQ9BWU0 796 aaKnown RBP20.74■□□□□ 0.91
PTPRE-203ENST00000442830 ACIN1Q9UKV3 1341 aaKnown RBP20.74■□□□□ 0.91
PTPRE-203ENST00000442830 LRRC59Q96AG4 307 aaKnown RBP20.73■□□□□ 0.91
PTPRE-203ENST00000442830 LAMC1P11047 1609 aa20.71■□□□□ 0.91
PTPRE-203ENST00000442830 CDK12Q9NYV4 1490 aaPredicted RBP20.69■□□□□ 0.9
PTPRE-203ENST00000442830 C1orf167Q5SNV9 1468 aa20.67■□□□□ 0.9
PTPRE-203ENST00000442830 CCDC144AA2RUR9 1427 aa20.66■□□□□ 0.9
PTPRE-203ENST00000442830 NUTM2BA6NNL0 878 aaPredicted RBP20.64■□□□□ 0.89
PTPRE-203ENST00000442830 NUTM2EB1AL46 878 aaPredicted RBP20.64■□□□□ 0.89
PTPRE-203ENST00000442830 RXRBP28702 533 aa20.64■□□□□ 0.89
PTPRE-203ENST00000442830 NUTM2AQ8IVF1 878 aaPredicted RBP20.64■□□□□ 0.89
PTPRE-203ENST00000442830 PNPLA6Q8IY17 1366 aa20.63■□□□□ 0.89
PTPRE-203ENST00000442830 ANKRD30BQ9BXX2 1392 aa20.63■□□□□ 0.89
PTPRE-203ENST00000442830 ROBO2Q9HCK4 1378 aa20.63■□□□□ 0.89
PTPRE-203ENST00000442830 CDC42BPGQ6DT37 1551 aa20.63■□□□□ 0.89
PTPRE-203ENST00000442830 IFT172Q9UG01 1749 aa20.61■□□□□ 0.89
PTPRE-203ENST00000442830 AFF2P51816 1311 aa20.6■□□□□ 0.89
PTPRE-203ENST00000442830 KNDC1Q76NI1 1749 aa20.59■□□□□ 0.89
PTPRE-203ENST00000442830 SOS2Q07890 1332 aaPredicted RBP20.58■□□□□ 0.89
PTPRE-203ENST00000442830 TECPR2O15040 1411 aa20.57■□□□□ 0.88
PTPRE-203ENST00000442830 SPATA31E1Q6ZUB1 1445 aa20.56■□□□□ 0.88
PTPRE-203ENST00000442830 COL22A1Q8NFW1 1626 aaPredicted RBP20.56■□□□□ 0.88
PTPRE-203ENST00000442830 NPHP3Q7Z494 1330 aa20.55■□□□□ 0.88
PTPRE-203ENST00000442830 MPHOSPH9Q99550 1183 aa20.55■□□□□ 0.88
PTPRE-203ENST00000442830 LRPPRCP42704 1394 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms