RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 RBM33Q96EV2 1170 aaKnown RBP30.77■■■□□ 2.52
UBE2F-215ENST00000441728 TET3O43151 1660 aa30.77■■■□□ 2.52
UBE2F-215ENST00000441728 MSH6P52701 1360 aa30.77■■■□□ 2.52
UBE2F-215ENST00000441728 NKTRP30414 1462 aaKnown RBP30.76■■■□□ 2.52
UBE2F-215ENST00000441728 CHGAP10645 457 aaKnown RBP30.75■■■□□ 2.51
UBE2F-215ENST00000441728 ROBO1Q9Y6N7 1651 aa30.71■■■□□ 2.51
UBE2F-215ENST00000441728 RIMS2Q9UQ26 1411 aa30.7■■■□□ 2.5
UBE2F-215ENST00000441728 NWD1Q149M9 1564 aa30.7■■■□□ 2.5
UBE2F-215ENST00000441728 PLEKHG1Q9ULL1 1385 aa30.69■■■□□ 2.5
UBE2F-215ENST00000441728 GCC2Q8IWJ2 1684 aa30.68■■■□□ 2.5
UBE2F-215ENST00000441728 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.68■■■□□ 2.5
UBE2F-215ENST00000441728 C14orf37Q86TY3 774 aa30.67■■■□□ 2.5
UBE2F-215ENST00000441728 MYO5BQ9ULV0 1848 aa30.64■■■□□ 2.5
UBE2F-215ENST00000441728 ZFYVE9O95405 1425 aa30.64■■■□□ 2.49
UBE2F-215ENST00000441728 SLAIN2Q9P270 581 aa30.63■■■□□ 2.49
UBE2F-215ENST00000441728 RGS17Q9UGC6 210 aaPredicted RBP30.62■■■□□ 2.49
UBE2F-215ENST00000441728 UNC13BO14795 1591 aa30.62■■■□□ 2.49
UBE2F-215ENST00000441728 TMEM131LA2VDJ0 1609 aa30.61■■■□□ 2.49
UBE2F-215ENST00000441728 TBX22Q9Y458 520 aa30.59■■■□□ 2.49
UBE2F-215ENST00000441728 CHD2O14647 1828 aaKnown RBP30.58■■■□□ 2.49
UBE2F-215ENST00000441728 PHLPP1O60346 1717 aa30.57■■■□□ 2.48
UBE2F-215ENST00000441728 ITGAEP38570 1179 aa30.56■■■□□ 2.48
UBE2F-215ENST00000441728 NUTM2DQ5VT03 806 aaPredicted RBP30.56■■■□□ 2.48
UBE2F-215ENST00000441728 ROCK1Q13464 1354 aa30.55■■■□□ 2.48
UBE2F-215ENST00000441728 E9PCH4 1651 aa30.54■■■□□ 2.48
UBE2F-215ENST00000441728 JCADQ9P266 1359 aa30.54■■■□□ 2.48
UBE2F-215ENST00000441728 NUP155O75694 1391 aa30.53■■■□□ 2.48
UBE2F-215ENST00000441728 NCOA3Q9Y6Q9 1424 aa30.51■■■□□ 2.47
UBE2F-215ENST00000441728 ATF3P18847 181 aa30.51■■■□□ 2.47
UBE2F-215ENST00000441728 POTEAQ6S8J7 498 aa30.51■■■□□ 2.47
UBE2F-215ENST00000441728 IQGAP3Q86VI3 1631 aa30.51■■■□□ 2.47
UBE2F-215ENST00000441728 DIP2AQ14689 1571 aa30.5■■■□□ 2.47
UBE2F-215ENST00000441728 CADPS2Q86UW7 1296 aa30.49■■■□□ 2.47
UBE2F-215ENST00000441728 PIK3R4Q99570 1358 aa30.48■■■□□ 2.47
UBE2F-215ENST00000441728 MEX3CQ5U5Q3 659 aaKnown RBP30.46■■■□□ 2.47
UBE2F-215ENST00000441728 C19orf44Q9H6X5 657 aa30.45■■■□□ 2.47
UBE2F-215ENST00000441728 ADAMTS13Q76LX8 1427 aa30.45■■■□□ 2.46
UBE2F-215ENST00000441728 TRPM2O94759 1503 aa30.44■■■□□ 2.46
UBE2F-215ENST00000441728 ZNF326Q5BKZ1 582 aaKnown RBP30.42■■■□□ 2.46
UBE2F-215ENST00000441728 AMOTL2Q9Y2J4 779 aa30.41■■■□□ 2.46
UBE2F-215ENST00000441728 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.39■■■□□ 2.46
UBE2F-215ENST00000441728 SPATA31A6Q5VVP1 1343 aa30.39■■■□□ 2.46
UBE2F-215ENST00000441728 COL16A1Q07092 1604 aaPredicted RBP30.39■■■□□ 2.46
UBE2F-215ENST00000441728 PPARGC1BQ86YN6 1023 aaKnown RBP30.36■■■□□ 2.45
UBE2F-215ENST00000441728 ZNF772Q68DY9 489 aaPredicted RBP30.32■■■□□ 2.44
UBE2F-215ENST00000441728 SPHKAPQ2M3C7 1700 aa30.32■■■□□ 2.44
UBE2F-215ENST00000441728 AHDC1Q5TGY3 1603 aaPredicted RBP30.32■■■□□ 2.44
UBE2F-215ENST00000441728 PTPRUQ92729 1446 aa30.29■■■□□ 2.44
UBE2F-215ENST00000441728 BRINP3Q76B58 766 aa30.27■■■□□ 2.44
UBE2F-215ENST00000441728 DCCP43146 1447 aa30.27■■■□□ 2.44
UBE2F-215ENST00000441728 NUTM2BA6NNL0 878 aaPredicted RBP30.26■■■□□ 2.43
UBE2F-215ENST00000441728 NUTM2EB1AL46 878 aaPredicted RBP30.26■■■□□ 2.43
UBE2F-215ENST00000441728 NUTM2AQ8IVF1 878 aaPredicted RBP30.26■■■□□ 2.43
UBE2F-215ENST00000441728 SETD1AO15047 1707 aaKnown RBP30.25■■■□□ 2.43
UBE2F-215ENST00000441728 SHPRHQ149N8 1683 aa30.25■■■□□ 2.43
UBE2F-215ENST00000441728 LRP6O75581 1613 aa30.25■■■□□ 2.43
UBE2F-215ENST00000441728 SETBP1Q9Y6X0 1596 aa30.24■■■□□ 2.43
UBE2F-215ENST00000441728 TRIM52Q96A61 297 aa30.22■■■□□ 2.43
UBE2F-215ENST00000441728 XRN1Q8IZH2 1706 aaKnown RBP30.21■■■□□ 2.43
UBE2F-215ENST00000441728 NRXN3Q9Y4C0 1643 aa30.2■■■□□ 2.43
UBE2F-215ENST00000441728 ASXL1Q8IXJ9 1541 aa30.19■■■□□ 2.42
UBE2F-215ENST00000441728 METP08581 1390 aa30.16■■■□□ 2.42
UBE2F-215ENST00000441728 MST1RQ04912 1400 aa30.15■■■□□ 2.42
UBE2F-215ENST00000441728 RXRBP28702 533 aa30.15■■■□□ 2.42
UBE2F-215ENST00000441728 LRRC59Q96AG4 307 aaKnown RBP30.15■■■□□ 2.42
UBE2F-215ENST00000441728 KIF1BO60333 1816 aa30.14■■■□□ 2.42
UBE2F-215ENST00000441728 CLTCL1P53675 1640 aa30.14■■■□□ 2.41
UBE2F-215ENST00000441728 ADGRL3Q9HAR2 1447 aa30.13■■■□□ 2.41
UBE2F-215ENST00000441728 NEXMIFQ5QGS0 1516 aa30.12■■■□□ 2.41
UBE2F-215ENST00000441728 SETD5Q9C0A6 1442 aa30.11■■■□□ 2.41
UBE2F-215ENST00000441728 VGFO15240 615 aaPredicted RBP30.09■■■□□ 2.41
UBE2F-215ENST00000441728 AFF2P51816 1311 aa30.09■■■□□ 2.41
UBE2F-215ENST00000441728 NHSL1Q5SYE7 1610 aa30.08■■■□□ 2.41
UBE2F-215ENST00000441728 NAIPQ13075 1403 aa30.05■■■□□ 2.4
UBE2F-215ENST00000441728 C8orf37Q96NL8 207 aa30.05■■■□□ 2.4
UBE2F-215ENST00000441728 NALCNQ8IZF0 1738 aa30.05■■■□□ 2.4
UBE2F-215ENST00000441728 RRBP1Q9P2E9 1410 aaKnown RBP30.05■■■□□ 2.4
UBE2F-215ENST00000441728 UPF1Q92900 1129 aaKnown RBP eCLIP30.04■■■□□ 2.4
UBE2F-215ENST00000441728 DDX17Q92841 729 aaKnown RBP30.03■■■□□ 2.4
UBE2F-215ENST00000441728 SLC4A1APQ9BWU0 796 aaKnown RBP30.02■■■□□ 2.4
UBE2F-215ENST00000441728 PNPLA6Q8IY17 1366 aa30■■■□□ 2.39
UBE2F-215ENST00000441728 RPGRIP1LQ68CZ1 1315 aa29.99■■■□□ 2.39
UBE2F-215ENST00000441728 CDK12Q9NYV4 1490 aaPredicted RBP29.99■■■□□ 2.39
UBE2F-215ENST00000441728 PTCH1Q13635 1447 aa29.98■■■□□ 2.39
UBE2F-215ENST00000441728 C1orf167Q5SNV9 1468 aa29.98■■■□□ 2.39
UBE2F-215ENST00000441728 ADAMTS2O95450 1211 aa29.96■■■□□ 2.39
UBE2F-215ENST00000441728 NGLY1Q96IV0 654 aa29.96■■■□□ 2.39
UBE2F-215ENST00000441728 QTRT2Q9H974 415 aaKnown RBP29.96■■■□□ 2.39
UBE2F-215ENST00000441728 RBM6P78332 1123 aaKnown RBP29.94■■■□□ 2.38
UBE2F-215ENST00000441728 HFM1A2PYH4 1435 aa29.93■■■□□ 2.38
UBE2F-215ENST00000441728 ROBO2Q9HCK4 1378 aa29.92■■■□□ 2.38
UBE2F-215ENST00000441728 ORAI2Q96SN7 254 aa29.91■■■□□ 2.38
UBE2F-215ENST00000441728 SOS2Q07890 1332 aaPredicted RBP29.86■■■□□ 2.37
UBE2F-215ENST00000441728 PPLO60437 1756 aa29.85■■■□□ 2.37
UBE2F-215ENST00000441728 USP21Q9UK80 565 aa29.84■■■□□ 2.37
UBE2F-215ENST00000441728 RGS12O14924 1447 aa29.84■■■□□ 2.37
UBE2F-215ENST00000441728 ESCO1Q5FWF5 840 aa29.83■■■□□ 2.37
UBE2F-215ENST00000441728 PRAG1Q86YV5 1406 aa29.82■■■□□ 2.36
UBE2F-215ENST00000441728 NPHP3Q7Z494 1330 aa29.82■■■□□ 2.36
UBE2F-215ENST00000441728 LAMC1P11047 1609 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms