RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.35■■□□□ 1.97
SMPD4-210ENST00000441135 SLC26A8Q96RN1 970 aa27.35■■□□□ 1.97
SMPD4-210ENST00000441135 SCAF1Q9H7N4 1312 aaKnown RBP27.35■■□□□ 1.97
SMPD4-210ENST00000441135 MYO5BQ9ULV0 1848 aa27.34■■□□□ 1.97
SMPD4-210ENST00000441135 PIP4K2BP78356 416 aa27.33■■□□□ 1.97
SMPD4-210ENST00000441135 BCANQ96GW7 911 aa27.33■■□□□ 1.97
SMPD4-210ENST00000441135 KCNA6P17658 529 aa27.32■■□□□ 1.96
SMPD4-210ENST00000441135 SPHKAPQ2M3C7 1700 aa27.32■■□□□ 1.96
SMPD4-210ENST00000441135 ALKQ9UM73 1620 aa27.31■■□□□ 1.96
SMPD4-210ENST00000441135 ACIN1Q9UKV3 1341 aaKnown RBP27.3■■□□□ 1.96
SMPD4-210ENST00000441135 NKTRP30414 1462 aaKnown RBP27.3■■□□□ 1.96
SMPD4-210ENST00000441135 NWD1Q149M9 1564 aa27.29■■□□□ 1.96
SMPD4-210ENST00000441135 TRPM2O94759 1503 aa27.26■■□□□ 1.96
SMPD4-210ENST00000441135 TMEM94Q12767 1356 aa27.25■■□□□ 1.95
SMPD4-210ENST00000441135 TRIM52Q96A61 297 aa27.24■■□□□ 1.95
SMPD4-210ENST00000441135 TBX22Q9Y458 520 aa27.24■■□□□ 1.95
SMPD4-210ENST00000441135 DISP3Q9P2K9 1392 aa27.23■■□□□ 1.95
SMPD4-210ENST00000441135 DIP2AQ14689 1571 aa27.23■■□□□ 1.95
SMPD4-210ENST00000441135 HSPA1LP34931 641 aa27.23■■□□□ 1.95
SMPD4-210ENST00000441135 XIRP1Q702N8 1843 aaKnown RBP27.21■■□□□ 1.95
SMPD4-210ENST00000441135 PROSER2Q86WR7 435 aaPredicted RBP27.21■■□□□ 1.95
SMPD4-210ENST00000441135 ADAMTS13Q76LX8 1427 aa27.21■■□□□ 1.95
SMPD4-210ENST00000441135 SETD5Q9C0A6 1442 aa27.21■■□□□ 1.95
SMPD4-210ENST00000441135 SENP3Q9H4L4 574 aaPredicted RBP27.2■■□□□ 1.94
SMPD4-210ENST00000441135 NUTM2DQ5VT03 806 aaPredicted RBP27.19■■□□□ 1.94
SMPD4-210ENST00000441135 PIK3R4Q99570 1358 aa27.19■■□□□ 1.94
SMPD4-210ENST00000441135 CLTCL1P53675 1640 aa27.19■■□□□ 1.94
SMPD4-210ENST00000441135 SLC4A1APQ9BWU0 796 aaKnown RBP27.18■■□□□ 1.94
SMPD4-210ENST00000441135 ZNF326Q5BKZ1 582 aaKnown RBP27.16■■□□□ 1.94
SMPD4-210ENST00000441135 CHD2O14647 1828 aaKnown RBP27.15■■□□□ 1.94
SMPD4-210ENST00000441135 SETBP1Q9Y6X0 1596 aa27.13■■□□□ 1.93
SMPD4-210ENST00000441135 MSH6P52701 1360 aa27.12■■□□□ 1.93
SMPD4-210ENST00000441135 NCOA3Q9Y6Q9 1424 aa27.1■■□□□ 1.93
SMPD4-210ENST00000441135 RBM33Q96EV2 1170 aaKnown RBP27.1■■□□□ 1.93
SMPD4-210ENST00000441135 NEXMIFQ5QGS0 1516 aa27.1■■□□□ 1.93
SMPD4-210ENST00000441135 RAB3GAP2Q9H2M9 1393 aa27.09■■□□□ 1.93
SMPD4-210ENST00000441135 FAM135BQ49AJ0 1406 aa27.09■■□□□ 1.93
SMPD4-210ENST00000441135 HRCP23327 699 aa27.09■■□□□ 1.93
SMPD4-210ENST00000441135 KIF1BO60333 1816 aa27.08■■□□□ 1.93
SMPD4-210ENST00000441135 NRXN3Q9Y4C0 1643 aa27.07■■□□□ 1.92
SMPD4-210ENST00000441135 MED1Q15648 1581 aaPredicted RBP27.02■■□□□ 1.92
SMPD4-210ENST00000441135 PTPRUQ92729 1446 aa27.02■■□□□ 1.92
SMPD4-210ENST00000441135 AMOTL2Q9Y2J4 779 aa27.02■■□□□ 1.92
SMPD4-210ENST00000441135 RPGRIP1LQ68CZ1 1315 aa27.01■■□□□ 1.91
SMPD4-210ENST00000441135 C14orf37Q86TY3 774 aa27.01■■□□□ 1.91
SMPD4-210ENST00000441135 MPHOSPH9Q99550 1183 aa27.01■■□□□ 1.91
SMPD4-210ENST00000441135 CCDC144AA2RUR9 1427 aa26.99■■□□□ 1.91
SMPD4-210ENST00000441135 XRN1Q8IZH2 1706 aaKnown RBP26.99■■□□□ 1.91
SMPD4-210ENST00000441135 VGFO15240 615 aaPredicted RBP26.99■■□□□ 1.91
SMPD4-210ENST00000441135 ROBO1Q9Y6N7 1651 aa26.98■■□□□ 1.91
SMPD4-210ENST00000441135 FOXD1Q16676 465 aa26.98■■□□□ 1.91
SMPD4-210ENST00000441135 METP08581 1390 aa26.97■■□□□ 1.91
SMPD4-210ENST00000441135 SLAIN2Q9P270 581 aa26.97■■□□□ 1.91
SMPD4-210ENST00000441135 C19orf44Q9H6X5 657 aa26.96■■□□□ 1.91
SMPD4-210ENST00000441135 ILDR2Q71H61 639 aa26.95■■□□□ 1.9
SMPD4-210ENST00000441135 CADPS2Q86UW7 1296 aa26.94■■□□□ 1.9
SMPD4-210ENST00000441135 ATF3P18847 181 aa26.92■■□□□ 1.9
SMPD4-210ENST00000441135 DCCP43146 1447 aa26.91■■□□□ 1.9
SMPD4-210ENST00000441135 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.9■■□□□ 1.9
SMPD4-210ENST00000441135 SPATA31E1Q6ZUB1 1445 aa26.9■■□□□ 1.9
SMPD4-210ENST00000441135 PPLO60437 1756 aa26.89■■□□□ 1.9
SMPD4-210ENST00000441135 ANKRD30BQ9BXX2 1392 aa26.85■■□□□ 1.89
SMPD4-210ENST00000441135 SETD1AO15047 1707 aaKnown RBP26.85■■□□□ 1.89
SMPD4-210ENST00000441135 PTCH1Q13635 1447 aa26.85■■□□□ 1.89
SMPD4-210ENST00000441135 PRAG1Q86YV5 1406 aa26.85■■□□□ 1.89
SMPD4-210ENST00000441135 PHF23Q9BUL5 403 aaPredicted RBP26.85■■□□□ 1.89
SMPD4-210ENST00000441135 ADGRL3Q9HAR2 1447 aa26.83■■□□□ 1.89
SMPD4-210ENST00000441135 RGL3Q3MIN7 710 aa26.81■■□□□ 1.88
SMPD4-210ENST00000441135 PHLPP1O60346 1717 aa26.81■■□□□ 1.88
SMPD4-210ENST00000441135 SOCS7O14512 581 aa26.79■■□□□ 1.88
SMPD4-210ENST00000441135 TRIM26Q12899 539 aaPredicted RBP26.79■■□□□ 1.88
SMPD4-210ENST00000441135 ADGRF5Q8IZF2 1346 aa26.78■■□□□ 1.88
SMPD4-210ENST00000441135 AHDC1Q5TGY3 1603 aaPredicted RBP26.78■■□□□ 1.88
SMPD4-210ENST00000441135 IFT172Q9UG01 1749 aa26.78■■□□□ 1.88
SMPD4-210ENST00000441135 MST1RQ04912 1400 aa26.77■■□□□ 1.88
SMPD4-210ENST00000441135 JCADQ9P266 1359 aa26.77■■□□□ 1.88
SMPD4-210ENST00000441135 COL16A1Q07092 1604 aaPredicted RBP26.76■■□□□ 1.87
SMPD4-210ENST00000441135 ROBO2Q9HCK4 1378 aa26.76■■□□□ 1.87
SMPD4-210ENST00000441135 NALCNQ8IZF0 1738 aa26.75■■□□□ 1.87
SMPD4-210ENST00000441135 BRINP3Q76B58 766 aa26.74■■□□□ 1.87
SMPD4-210ENST00000441135 PIK3C2GO75747 1445 aa26.73■■□□□ 1.87
SMPD4-210ENST00000441135 ASXL1Q8IXJ9 1541 aa26.73■■□□□ 1.87
SMPD4-210ENST00000441135 MYOM2P54296 1465 aa26.69■■□□□ 1.86
SMPD4-210ENST00000441135 TECPR2O15040 1411 aa26.69■■□□□ 1.86
SMPD4-210ENST00000441135 LRPPRCP42704 1394 aaKnown RBP26.67■■□□□ 1.86
SMPD4-210ENST00000441135 NRXN1Q9ULB1 1477 aa26.67■■□□□ 1.86
SMPD4-210ENST00000441135 SPATA31A6Q5VVP1 1343 aa26.65■■□□□ 1.86
SMPD4-210ENST00000441135 C1orf167Q5SNV9 1468 aa26.65■■□□□ 1.86
SMPD4-210ENST00000441135 ABCC11Q96J66 1382 aa26.64■■□□□ 1.86
SMPD4-210ENST00000441135 NHSL1Q5SYE7 1610 aa26.63■■□□□ 1.85
SMPD4-210ENST00000441135 SHPRHQ149N8 1683 aa26.62■■□□□ 1.85
SMPD4-210ENST00000441135 CDC42BPGQ6DT37 1551 aa26.62■■□□□ 1.85
SMPD4-210ENST00000441135 LAMC1P11047 1609 aa26.61■■□□□ 1.85
SMPD4-210ENST00000441135 C14orf93Q9H972 538 aaKnown RBP26.61■■□□□ 1.85
SMPD4-210ENST00000441135 STK26Q9P289 416 aa26.61■■□□□ 1.85
SMPD4-210ENST00000441135 RGS17Q9UGC6 210 aaPredicted RBP26.61■■□□□ 1.85
SMPD4-210ENST00000441135 KNDC1Q76NI1 1749 aa26.61■■□□□ 1.85
SMPD4-210ENST00000441135 YTHDC2Q9H6S0 1430 aaKnown RBP26.6■■□□□ 1.85
SMPD4-210ENST00000441135 TMEM132EQ6IEE7 984 aa26.59■■□□□ 1.85
SMPD4-210ENST00000441135 STAC3Q96MF2 364 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms