RNA–Protein interactions for RNA: ENST00000440902.2

LYSMD1-202, Transcript of LysM domain containing 1, humanhuman

TSL 2 BASIC

Gene LYSMD1, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-202ENST00000440902 UNC13BO14795 1591 aa12.47□□□□□ -0.41
LYSMD1-202ENST00000440902 RBM33Q96EV2 1170 aaKnown RBP12.47□□□□□ -0.41
LYSMD1-202ENST00000440902 NKTRP30414 1462 aaKnown RBP12.46□□□□□ -0.41
LYSMD1-202ENST00000440902 RPRD2Q5VT52 1461 aaKnown RBP12.46□□□□□ -0.41
LYSMD1-202ENST00000440902 CHD2O14647 1828 aaKnown RBP12.46□□□□□ -0.41
LYSMD1-202ENST00000440902 E9PCH4 1651 aa12.46□□□□□ -0.41
LYSMD1-202ENST00000440902 KCNA6P17658 529 aa12.46□□□□□ -0.41
LYSMD1-202ENST00000440902 PROSER2Q86WR7 435 aaPredicted RBP12.46□□□□□ -0.41
LYSMD1-202ENST00000440902 TMEM131LA2VDJ0 1609 aa12.46□□□□□ -0.41
LYSMD1-202ENST00000440902 SLC52A1Q9NWF4 448 aa12.45□□□□□ -0.42
LYSMD1-202ENST00000440902 FAM135BQ49AJ0 1406 aa12.45□□□□□ -0.42
LYSMD1-202ENST00000440902 PHLPP1O60346 1717 aa12.44□□□□□ -0.42
LYSMD1-202ENST00000440902 ZFYVE9O95405 1425 aa12.44□□□□□ -0.42
LYSMD1-202ENST00000440902 RIMS2Q9UQ26 1411 aa12.44□□□□□ -0.42
LYSMD1-202ENST00000440902 PPP1R15AO75807 674 aaPredicted RBP12.43□□□□□ -0.42
LYSMD1-202ENST00000440902 IQGAP3Q86VI3 1631 aa12.42□□□□□ -0.42
LYSMD1-202ENST00000440902 MSH6P52701 1360 aa12.42□□□□□ -0.42
LYSMD1-202ENST00000440902 PLEKHG1Q9ULL1 1385 aa12.42□□□□□ -0.42
LYSMD1-202ENST00000440902 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
LYSMD1-202ENST00000440902 RGS17Q9UGC6 210 aaPredicted RBP12.4□□□□□ -0.42
LYSMD1-202ENST00000440902 DIP2AQ14689 1571 aa12.39□□□□□ -0.43
LYSMD1-202ENST00000440902 NUTM2DQ5VT03 806 aaPredicted RBP12.38□□□□□ -0.43
LYSMD1-202ENST00000440902 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.37□□□□□ -0.43
LYSMD1-202ENST00000440902 ITGAEP38570 1179 aa12.37□□□□□ -0.43
LYSMD1-202ENST00000440902 HDGFP51858 240 aaKnown RBP12.37□□□□□ -0.43
LYSMD1-202ENST00000440902 SETD1AO15047 1707 aaKnown RBP12.37□□□□□ -0.43
LYSMD1-202ENST00000440902 SPHKAPQ2M3C7 1700 aa12.37□□□□□ -0.43
LYSMD1-202ENST00000440902 COL16A1Q07092 1604 aaPredicted RBP12.37□□□□□ -0.43
LYSMD1-202ENST00000440902 ROCK1Q13464 1354 aa12.36□□□□□ -0.43
LYSMD1-202ENST00000440902 C14orf37Q86TY3 774 aa12.36□□□□□ -0.43
LYSMD1-202ENST00000440902 SLAIN2Q9P270 581 aa12.36□□□□□ -0.43
LYSMD1-202ENST00000440902 ADAMTS13Q76LX8 1427 aa12.36□□□□□ -0.43
LYSMD1-202ENST00000440902 POTEAQ6S8J7 498 aa12.35□□□□□ -0.43
LYSMD1-202ENST00000440902 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.35□□□□□ -0.43
LYSMD1-202ENST00000440902 TRPM2O94759 1503 aa12.35□□□□□ -0.43
LYSMD1-202ENST00000440902 NUP155O75694 1391 aa12.34□□□□□ -0.43
LYSMD1-202ENST00000440902 TBX22Q9Y458 520 aa12.34□□□□□ -0.43
LYSMD1-202ENST00000440902 PPARGC1BQ86YN6 1023 aaKnown RBP12.33□□□□□ -0.44
LYSMD1-202ENST00000440902 NRXN3Q9Y4C0 1643 aa12.33□□□□□ -0.44
LYSMD1-202ENST00000440902 JCADQ9P266 1359 aa12.32□□□□□ -0.44
LYSMD1-202ENST00000440902 XRN1Q8IZH2 1706 aaKnown RBP12.31□□□□□ -0.44
LYSMD1-202ENST00000440902 NCOA3Q9Y6Q9 1424 aa12.31□□□□□ -0.44
LYSMD1-202ENST00000440902 AHDC1Q5TGY3 1603 aaPredicted RBP12.31□□□□□ -0.44
LYSMD1-202ENST00000440902 SHPRHQ149N8 1683 aa12.31□□□□□ -0.44
LYSMD1-202ENST00000440902 PIK3R4Q99570 1358 aa12.3□□□□□ -0.44
LYSMD1-202ENST00000440902 PTPRUQ92729 1446 aa12.3□□□□□ -0.44
LYSMD1-202ENST00000440902 LRP6O75581 1613 aa12.29□□□□□ -0.44
LYSMD1-202ENST00000440902 ATF3P18847 181 aa12.29□□□□□ -0.44
LYSMD1-202ENST00000440902 CADPS2Q86UW7 1296 aa12.29□□□□□ -0.44
LYSMD1-202ENST00000440902 SETBP1Q9Y6X0 1596 aa12.29□□□□□ -0.44
LYSMD1-202ENST00000440902 KIF1BO60333 1816 aa12.28□□□□□ -0.44
LYSMD1-202ENST00000440902 C19orf44Q9H6X5 657 aa12.28□□□□□ -0.44
LYSMD1-202ENST00000440902 AMOTL2Q9Y2J4 779 aa12.28□□□□□ -0.44
LYSMD1-202ENST00000440902 CLTCL1P53675 1640 aa12.28□□□□□ -0.44
LYSMD1-202ENST00000440902 ZNF326Q5BKZ1 582 aaKnown RBP12.27□□□□□ -0.45
LYSMD1-202ENST00000440902 MEX3CQ5U5Q3 659 aaKnown RBP12.27□□□□□ -0.45
LYSMD1-202ENST00000440902 NALCNQ8IZF0 1738 aa12.26□□□□□ -0.45
LYSMD1-202ENST00000440902 NEXMIFQ5QGS0 1516 aa12.26□□□□□ -0.45
LYSMD1-202ENST00000440902 ASXL1Q8IXJ9 1541 aa12.26□□□□□ -0.45
LYSMD1-202ENST00000440902 NHSL1Q5SYE7 1610 aa12.26□□□□□ -0.45
LYSMD1-202ENST00000440902 SPATA31A6Q5VVP1 1343 aa12.25□□□□□ -0.45
LYSMD1-202ENST00000440902 DCCP43146 1447 aa12.25□□□□□ -0.45
LYSMD1-202ENST00000440902 BRINP3Q76B58 766 aa12.24□□□□□ -0.45
LYSMD1-202ENST00000440902 METP08581 1390 aa12.23□□□□□ -0.45
LYSMD1-202ENST00000440902 MST1RQ04912 1400 aa12.22□□□□□ -0.45
LYSMD1-202ENST00000440902 NUTM2BA6NNL0 878 aaPredicted RBP12.22□□□□□ -0.45
LYSMD1-202ENST00000440902 NUTM2EB1AL46 878 aaPredicted RBP12.22□□□□□ -0.45
LYSMD1-202ENST00000440902 NUTM2AQ8IVF1 878 aaPredicted RBP12.22□□□□□ -0.45
LYSMD1-202ENST00000440902 TRIM52Q96A61 297 aa12.21□□□□□ -0.45
LYSMD1-202ENST00000440902 ADGRL3Q9HAR2 1447 aa12.2□□□□□ -0.46
LYSMD1-202ENST00000440902 ZNF772Q68DY9 489 aaPredicted RBP12.2□□□□□ -0.46
LYSMD1-202ENST00000440902 NAIPQ13075 1403 aa12.2□□□□□ -0.46
LYSMD1-202ENST00000440902 RRBP1Q9P2E9 1410 aaKnown RBP12.2□□□□□ -0.46
LYSMD1-202ENST00000440902 PPLO60437 1756 aa12.19□□□□□ -0.46
LYSMD1-202ENST00000440902 SETD5Q9C0A6 1442 aa12.18□□□□□ -0.46
LYSMD1-202ENST00000440902 DDX17Q92841 729 aaKnown RBP12.17□□□□□ -0.46
LYSMD1-202ENST00000440902 AFF2P51816 1311 aa12.16□□□□□ -0.46
LYSMD1-202ENST00000440902 PTCH1Q13635 1447 aa12.15□□□□□ -0.46
LYSMD1-202ENST00000440902 RXRBP28702 533 aa12.15□□□□□ -0.46
LYSMD1-202ENST00000440902 PNPLA6Q8IY17 1366 aa12.15□□□□□ -0.46
LYSMD1-202ENST00000440902 C1orf167Q5SNV9 1468 aa12.14□□□□□ -0.47
LYSMD1-202ENST00000440902 LRRC59Q96AG4 307 aaKnown RBP12.14□□□□□ -0.47
LYSMD1-202ENST00000440902 C8orf37Q96NL8 207 aa12.14□□□□□ -0.47
LYSMD1-202ENST00000440902 LAMC1P11047 1609 aa12.14□□□□□ -0.47
LYSMD1-202ENST00000440902 HFM1A2PYH4 1435 aa12.13□□□□□ -0.47
LYSMD1-202ENST00000440902 UPF1Q92900 1129 aaKnown RBP eCLIP12.13□□□□□ -0.472e-7■■■□□ 17.4
LYSMD1-202ENST00000440902 ROBO2Q9HCK4 1378 aa12.13□□□□□ -0.47
LYSMD1-202ENST00000440902 CDK12Q9NYV4 1490 aaPredicted RBP12.13□□□□□ -0.47
LYSMD1-202ENST00000440902 VGFO15240 615 aaPredicted RBP12.12□□□□□ -0.47
LYSMD1-202ENST00000440902 SLC4A1APQ9BWU0 796 aaKnown RBP12.12□□□□□ -0.47
LYSMD1-202ENST00000440902 IFT172Q9UG01 1749 aa12.11□□□□□ -0.47
LYSMD1-202ENST00000440902 RGS12O14924 1447 aa12.11□□□□□ -0.47
LYSMD1-202ENST00000440902 ADAMTS2O95450 1211 aa12.1□□□□□ -0.47
LYSMD1-202ENST00000440902 PIAS4Q8N2W9 510 aaPredicted RBP12.1□□□□□ -0.47
LYSMD1-202ENST00000440902 ORAI2Q96SN7 254 aa12.1□□□□□ -0.47
LYSMD1-202ENST00000440902 PRAG1Q86YV5 1406 aa12.1□□□□□ -0.47
LYSMD1-202ENST00000440902 RPGRIP1LQ68CZ1 1315 aa12.1□□□□□ -0.47
LYSMD1-202ENST00000440902 QTRT2Q9H974 415 aaKnown RBP12.09□□□□□ -0.47
LYSMD1-202ENST00000440902 CDC42BPGQ6DT37 1551 aa12.09□□□□□ -0.47
LYSMD1-202ENST00000440902 MARF1Q9Y4F3 1742 aaKnown RBP12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms