RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-213ENST00000440293 PROSER2Q86WR7 435 aaPredicted RBP27.32■■□□□ 1.96
HDAC7-213ENST00000440293 NKTRP30414 1462 aaKnown RBP27.32■■□□□ 1.96
HDAC7-213ENST00000440293 SLC26A8Q96RN1 970 aa27.31■■□□□ 1.96
HDAC7-213ENST00000440293 SENP3Q9H4L4 574 aaPredicted RBP27.28■■□□□ 1.96
HDAC7-213ENST00000440293 NWD1Q149M9 1564 aa27.26■■□□□ 1.96
HDAC7-213ENST00000440293 PLEKHG1Q9ULL1 1385 aa27.25■■□□□ 1.95
HDAC7-213ENST00000440293 RGS17Q9UGC6 210 aaPredicted RBP27.25■■□□□ 1.95
HDAC7-213ENST00000440293 ZFYVE9O95405 1425 aa27.24■■□□□ 1.95
HDAC7-213ENST00000440293 NCOA3Q9Y6Q9 1424 aa27.23■■□□□ 1.95
HDAC7-213ENST00000440293 MSH6P52701 1360 aa27.22■■□□□ 1.95
HDAC7-213ENST00000440293 BCANQ96GW7 911 aa27.22■■□□□ 1.95
HDAC7-213ENST00000440293 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.21■■□□□ 1.95
HDAC7-213ENST00000440293 TBX22Q9Y458 520 aa27.21■■□□□ 1.95
HDAC7-213ENST00000440293 SLAIN2Q9P270 581 aa27.19■■□□□ 1.94
HDAC7-213ENST00000440293 RIMS2Q9UQ26 1411 aa27.17■■□□□ 1.94
HDAC7-213ENST00000440293 ROBO1Q9Y6N7 1651 aa27.17■■□□□ 1.94
HDAC7-213ENST00000440293 PPP1R15AO75807 674 aaPredicted RBP27.16■■□□□ 1.94
HDAC7-213ENST00000440293 TMEM131LA2VDJ0 1609 aa27.14■■□□□ 1.94
HDAC7-213ENST00000440293 PIK3R4Q99570 1358 aa27.13■■□□□ 1.93
HDAC7-213ENST00000440293 RBM33Q96EV2 1170 aaKnown RBP27.13■■□□□ 1.93
HDAC7-213ENST00000440293 NAIPQ13075 1403 aa27.13■■□□□ 1.93
HDAC7-213ENST00000440293 UNC13BO14795 1591 aa27.12■■□□□ 1.93
HDAC7-213ENST00000440293 NUP155O75694 1391 aa27.11■■□□□ 1.93
HDAC7-213ENST00000440293 CHD2O14647 1828 aaKnown RBP27.11■■□□□ 1.93
HDAC7-213ENST00000440293 GCC2Q8IWJ2 1684 aa27.11■■□□□ 1.93
HDAC7-213ENST00000440293 JCADQ9P266 1359 aa27.09■■□□□ 1.93
HDAC7-213ENST00000440293 HFM1A2PYH4 1435 aa27.09■■□□□ 1.93
HDAC7-213ENST00000440293 DIP2AQ14689 1571 aa27.07■■□□□ 1.92
HDAC7-213ENST00000440293 POTEAQ6S8J7 498 aa27.07■■□□□ 1.92
HDAC7-213ENST00000440293 CADPS2Q86UW7 1296 aa27.05■■□□□ 1.92
HDAC7-213ENST00000440293 C19orf44Q9H6X5 657 aa27.05■■□□□ 1.92
HDAC7-213ENST00000440293 ADAMTS13Q76LX8 1427 aa27.05■■□□□ 1.92
HDAC7-213ENST00000440293 CHGAP10645 457 aaKnown RBP27.03■■□□□ 1.92
HDAC7-213ENST00000440293 TRIM52Q96A61 297 aa27.02■■□□□ 1.92
HDAC7-213ENST00000440293 IQGAP3Q86VI3 1631 aa27.01■■□□□ 1.92
HDAC7-213ENST00000440293 MYO5BQ9ULV0 1848 aa27.01■■□□□ 1.91
HDAC7-213ENST00000440293 E9PCH4 1651 aa27.01■■□□□ 1.91
HDAC7-213ENST00000440293 SPATA31A6Q5VVP1 1343 aa27■■□□□ 1.91
HDAC7-213ENST00000440293 PHLPP1O60346 1717 aa27■■□□□ 1.91
HDAC7-213ENST00000440293 ATF3P18847 181 aa26.99■■□□□ 1.91
HDAC7-213ENST00000440293 C14orf37Q86TY3 774 aa26.98■■□□□ 1.91
HDAC7-213ENST00000440293 TRPM2O94759 1503 aa26.95■■□□□ 1.91
HDAC7-213ENST00000440293 COL16A1Q07092 1604 aaPredicted RBP26.94■■□□□ 1.9
HDAC7-213ENST00000440293 AMOTL2Q9Y2J4 779 aa26.94■■□□□ 1.9
HDAC7-213ENST00000440293 ACIN1Q9UKV3 1341 aaKnown RBP26.92■■□□□ 1.9
HDAC7-213ENST00000440293 DCCP43146 1447 aa26.92■■□□□ 1.9
HDAC7-213ENST00000440293 AHDC1Q5TGY3 1603 aaPredicted RBP26.92■■□□□ 1.9
HDAC7-213ENST00000440293 NUTM2DQ5VT03 806 aaPredicted RBP26.92■■□□□ 1.9
HDAC7-213ENST00000440293 SETD5Q9C0A6 1442 aa26.9■■□□□ 1.9
HDAC7-213ENST00000440293 ZNF772Q68DY9 489 aaPredicted RBP26.9■■□□□ 1.9
HDAC7-213ENST00000440293 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.9■■□□□ 1.9
HDAC7-213ENST00000440293 SLC4A1APQ9BWU0 796 aaKnown RBP26.88■■□□□ 1.89
HDAC7-213ENST00000440293 PTPRUQ92729 1446 aa26.87■■□□□ 1.89
HDAC7-213ENST00000440293 SETBP1Q9Y6X0 1596 aa26.86■■□□□ 1.89
HDAC7-213ENST00000440293 BRINP3Q76B58 766 aa26.84■■□□□ 1.89
HDAC7-213ENST00000440293 MEX3CQ5U5Q3 659 aaKnown RBP26.83■■□□□ 1.89
HDAC7-213ENST00000440293 SHPRHQ149N8 1683 aa26.82■■□□□ 1.88
HDAC7-213ENST00000440293 LRP6O75581 1613 aa26.82■■□□□ 1.88
HDAC7-213ENST00000440293 MPHOSPH9Q99550 1183 aa26.8■■□□□ 1.88
HDAC7-213ENST00000440293 ZNF326Q5BKZ1 582 aaKnown RBP26.79■■□□□ 1.88
HDAC7-213ENST00000440293 RAB3GAP2Q9H2M9 1393 aa26.79■■□□□ 1.88
HDAC7-213ENST00000440293 XRN1Q8IZH2 1706 aaKnown RBP26.79■■□□□ 1.88
HDAC7-213ENST00000440293 HRCP23327 699 aa26.78■■□□□ 1.88
HDAC7-213ENST00000440293 NRXN3Q9Y4C0 1643 aa26.77■■□□□ 1.88
HDAC7-213ENST00000440293 SPHKAPQ2M3C7 1700 aa26.76■■□□□ 1.88
HDAC7-213ENST00000440293 LRRC59Q96AG4 307 aaKnown RBP26.76■■□□□ 1.87
HDAC7-213ENST00000440293 MST1RQ04912 1400 aa26.75■■□□□ 1.87
HDAC7-213ENST00000440293 METP08581 1390 aa26.75■■□□□ 1.87
HDAC7-213ENST00000440293 ASXL1Q8IXJ9 1541 aa26.75■■□□□ 1.87
HDAC7-213ENST00000440293 RXRBP28702 533 aa26.72■■□□□ 1.87
HDAC7-213ENST00000440293 CDK12Q9NYV4 1490 aaPredicted RBP26.72■■□□□ 1.87
HDAC7-213ENST00000440293 ADGRL3Q9HAR2 1447 aa26.72■■□□□ 1.87
HDAC7-213ENST00000440293 FOXD1Q16676 465 aa26.71■■□□□ 1.87
HDAC7-213ENST00000440293 VGFO15240 615 aaPredicted RBP26.69■■□□□ 1.86
HDAC7-213ENST00000440293 NEXMIFQ5QGS0 1516 aa26.69■■□□□ 1.86
HDAC7-213ENST00000440293 UPF1Q92900 1129 aaKnown RBP eCLIP26.68■■□□□ 1.86
HDAC7-213ENST00000440293 NHSL1Q5SYE7 1610 aa26.67■■□□□ 1.86
HDAC7-213ENST00000440293 RPGRIP1LQ68CZ1 1315 aa26.66■■□□□ 1.86
HDAC7-213ENST00000440293 SETD1AO15047 1707 aaKnown RBP26.65■■□□□ 1.86
HDAC7-213ENST00000440293 NUTM2BA6NNL0 878 aaPredicted RBP26.65■■□□□ 1.86
HDAC7-213ENST00000440293 NUTM2EB1AL46 878 aaPredicted RBP26.65■■□□□ 1.86
HDAC7-213ENST00000440293 NUTM2AQ8IVF1 878 aaPredicted RBP26.65■■□□□ 1.86
HDAC7-213ENST00000440293 CLTCL1P53675 1640 aa26.64■■□□□ 1.85
HDAC7-213ENST00000440293 PTCH1Q13635 1447 aa26.64■■□□□ 1.85
HDAC7-213ENST00000440293 PRAG1Q86YV5 1406 aa26.64■■□□□ 1.85
HDAC7-213ENST00000440293 AFF2P51816 1311 aa26.63■■□□□ 1.85
HDAC7-213ENST00000440293 TRIM26Q12899 539 aaPredicted RBP26.61■■□□□ 1.85
HDAC7-213ENST00000440293 PNPLA6Q8IY17 1366 aa26.6■■□□□ 1.85
HDAC7-213ENST00000440293 C1orf167Q5SNV9 1468 aa26.59■■□□□ 1.85
HDAC7-213ENST00000440293 KIF1BO60333 1816 aa26.58■■□□□ 1.85
HDAC7-213ENST00000440293 RBM6P78332 1123 aaKnown RBP26.57■■□□□ 1.84
HDAC7-213ENST00000440293 LAMC1P11047 1609 aa26.56■■□□□ 1.84
HDAC7-213ENST00000440293 SOS2Q07890 1332 aaPredicted RBP26.56■■□□□ 1.84
HDAC7-213ENST00000440293 QTRT2Q9H974 415 aaKnown RBP26.55■■□□□ 1.84
HDAC7-213ENST00000440293 NALCNQ8IZF0 1738 aa26.55■■□□□ 1.84
HDAC7-213ENST00000440293 CCDC144AA2RUR9 1427 aa26.54■■□□□ 1.84
HDAC7-213ENST00000440293 C8orf37Q96NL8 207 aa26.53■■□□□ 1.84
HDAC7-213ENST00000440293 ROBO2Q9HCK4 1378 aa26.53■■□□□ 1.84
HDAC7-213ENST00000440293 DDX17Q92841 729 aaKnown RBP26.52■■□□□ 1.84
HDAC7-213ENST00000440293 NGLY1Q96IV0 654 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms