RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 STAG3Q9UJ98 1225 aa17.33■□□□□ 0.36
AC009404.1-202ENST00000439955 DHX57Q6P158 1386 aaKnown RBP17.32■□□□□ 0.36
AC009404.1-202ENST00000439955 DUOX2Q9NRD8 1548 aa17.31■□□□□ 0.36
AC009404.1-202ENST00000439955 ANKRD50Q9ULJ7 1429 aa17.31■□□□□ 0.36
AC009404.1-202ENST00000439955 TMEM2Q9UHN6 1383 aa17.31■□□□□ 0.36
AC009404.1-202ENST00000439955 CLSPNQ9HAW4 1339 aa17.3■□□□□ 0.36
AC009404.1-202ENST00000439955 CFAP65Q6ZU64 1925 aaKnown RBP17.3■□□□□ 0.36
AC009404.1-202ENST00000439955 CCER1Q8TC90 406 aaPredicted RBP17.3■□□□□ 0.36
AC009404.1-202ENST00000439955 JCADQ9P266 1359 aa17.29■□□□□ 0.36
AC009404.1-202ENST00000439955 PIAS4Q8N2W9 510 aaPredicted RBP17.29■□□□□ 0.36
AC009404.1-202ENST00000439955 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.29■□□□□ 0.36
AC009404.1-202ENST00000439955 SLAIN2Q9P270 581 aa17.29■□□□□ 0.36
AC009404.1-202ENST00000439955 ERBINQ96RT1 1412 aa17.29■□□□□ 0.36
AC009404.1-202ENST00000439955 PIK3C2BO00750 1634 aa17.29■□□□□ 0.36
AC009404.1-202ENST00000439955 MEX3CQ5U5Q3 659 aaKnown RBP17.28■□□□□ 0.36
AC009404.1-202ENST00000439955 EIF2AK4Q9P2K8 1649 aaKnown RBP17.28■□□□□ 0.36
AC009404.1-202ENST00000439955 BCANQ96GW7 911 aa17.27■□□□□ 0.36
AC009404.1-202ENST00000439955 PHLPP1O60346 1717 aa17.27■□□□□ 0.35
AC009404.1-202ENST00000439955 MSH6P52701 1360 aa17.27■□□□□ 0.35
AC009404.1-202ENST00000439955 LRP6O75581 1613 aa17.26■□□□□ 0.35
AC009404.1-202ENST00000439955 PRDM15P57071 1507 aaPredicted RBP17.26■□□□□ 0.35
AC009404.1-202ENST00000439955 ZEB1P37275 1124 aaPredicted RBP17.25■□□□□ 0.35
AC009404.1-202ENST00000439955 IDI1Q13907 227 aa17.25■□□□□ 0.35
AC009404.1-202ENST00000439955 UNC13BO14795 1591 aa17.24■□□□□ 0.35
AC009404.1-202ENST00000439955 ARHGAP31Q2M1Z3 1444 aa17.24■□□□□ 0.35
AC009404.1-202ENST00000439955 TET3O43151 1660 aa17.23■□□□□ 0.35
AC009404.1-202ENST00000439955 EFCAB6Q5THR3 1501 aa17.23■□□□□ 0.35
AC009404.1-202ENST00000439955 ZNF772Q68DY9 489 aaPredicted RBP17.22■□□□□ 0.35
AC009404.1-202ENST00000439955 NKTRP30414 1462 aaKnown RBP17.21■□□□□ 0.35
AC009404.1-202ENST00000439955 COL16A1Q07092 1604 aaPredicted RBP17.2■□□□□ 0.34
AC009404.1-202ENST00000439955 RXRBP28702 533 aa17.19■□□□□ 0.34
AC009404.1-202ENST00000439955 NWD1Q149M9 1564 aa17.19■□□□□ 0.34
AC009404.1-202ENST00000439955 SPATA31A6Q5VVP1 1343 aa17.19■□□□□ 0.34
AC009404.1-202ENST00000439955 NUTM2BA6NNL0 878 aaPredicted RBP17.18■□□□□ 0.34
AC009404.1-202ENST00000439955 NUTM2EB1AL46 878 aaPredicted RBP17.18■□□□□ 0.34
AC009404.1-202ENST00000439955 NUTM2AQ8IVF1 878 aaPredicted RBP17.18■□□□□ 0.34
AC009404.1-202ENST00000439955 C14orf37Q86TY3 774 aa17.17■□□□□ 0.34
AC009404.1-202ENST00000439955 IQGAP3Q86VI3 1631 aa17.16■□□□□ 0.34
AC009404.1-202ENST00000439955 KANK1Q14678 1352 aa17.15■□□□□ 0.34
AC009404.1-202ENST00000439955 MPHOSPH9Q99550 1183 aa17.13■□□□□ 0.33
AC009404.1-202ENST00000439955 NUP155O75694 1391 aa17.13■□□□□ 0.33
AC009404.1-202ENST00000439955 ADGRB3O60242 1522 aa17.12■□□□□ 0.33
AC009404.1-202ENST00000439955 KDM5AP29375 1690 aaKnown RBP17.11■□□□□ 0.33
AC009404.1-202ENST00000439955 PPP1R15AO75807 674 aaPredicted RBP17.11■□□□□ 0.33
AC009404.1-202ENST00000439955 AFF2P51816 1311 aa17.11■□□□□ 0.33
AC009404.1-202ENST00000439955 SRCAPQ6ZRS2 3230 aa17.11■□□□□ 0.33
AC009404.1-202ENST00000439955 SLC4A1APQ9BWU0 796 aaKnown RBP17.09■□□□□ 0.33
AC009404.1-202ENST00000439955 NOS1P29475 1434 aa17.09■□□□□ 0.33
AC009404.1-202ENST00000439955 PLEKHG1Q9ULL1 1385 aa17.08■□□□□ 0.32
AC009404.1-202ENST00000439955 ATF3P18847 181 aa17.08■□□□□ 0.32
AC009404.1-202ENST00000439955 NUTM2DQ5VT03 806 aaPredicted RBP17.08■□□□□ 0.32
AC009404.1-202ENST00000439955 AHDC1Q5TGY3 1603 aaPredicted RBP17.07■□□□□ 0.32
AC009404.1-202ENST00000439955 LMTK2Q8IWU2 1503 aa17.07■□□□□ 0.32
AC009404.1-202ENST00000439955 CADPS2Q86UW7 1296 aa17.07■□□□□ 0.32
AC009404.1-202ENST00000439955 SHPRHQ149N8 1683 aa17.07■□□□□ 0.32
AC009404.1-202ENST00000439955 CDK12Q9NYV4 1490 aaPredicted RBP17.06■□□□□ 0.32
AC009404.1-202ENST00000439955 RGS12O14924 1447 aa17.06■□□□□ 0.32
AC009404.1-202ENST00000439955 ZFYVE9O95405 1425 aa17.06■□□□□ 0.32
AC009404.1-202ENST00000439955 RIMS2Q9UQ26 1411 aa17.06■□□□□ 0.32
AC009404.1-202ENST00000439955 BRINP3Q76B58 766 aa17.06■□□□□ 0.32
AC009404.1-202ENST00000439955 SLC52A1Q9NWF4 448 aa17.06■□□□□ 0.32
AC009404.1-202ENST00000439955 C8orf37Q96NL8 207 aa17.05■□□□□ 0.32
AC009404.1-202ENST00000439955 C19orf44Q9H6X5 657 aa17.05■□□□□ 0.32
AC009404.1-202ENST00000439955 TBX22Q9Y458 520 aa17.04■□□□□ 0.32
AC009404.1-202ENST00000439955 CHD2O14647 1828 aaKnown RBP17.04■□□□□ 0.32
AC009404.1-202ENST00000439955 ANKRD30BQ9BXX2 1392 aa17.03■□□□□ 0.32
AC009404.1-202ENST00000439955 DIP2AQ14689 1571 aa17.03■□□□□ 0.32
AC009404.1-202ENST00000439955 CHGAP10645 457 aaKnown RBP17.03■□□□□ 0.32
AC009404.1-202ENST00000439955 QTRT2Q9H974 415 aaKnown RBP17.03■□□□□ 0.32
AC009404.1-202ENST00000439955 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.03■□□□□ 0.32
AC009404.1-202ENST00000439955 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
AC009404.1-202ENST00000439955 TIMELESSQ9UNS1 1208 aa17.02■□□□□ 0.32
AC009404.1-202ENST00000439955 HDGFP51858 240 aaKnown RBP17■□□□□ 0.31
AC009404.1-202ENST00000439955 RBM6P78332 1123 aaKnown RBP17■□□□□ 0.31
AC009404.1-202ENST00000439955 ADAMTS13Q76LX8 1427 aa17■□□□□ 0.31
AC009404.1-202ENST00000439955 DDX17Q92841 729 aaKnown RBP17■□□□□ 0.31
AC009404.1-202ENST00000439955 RPRD2Q5VT52 1461 aaKnown RBP16.99■□□□□ 0.31
AC009404.1-202ENST00000439955 E9PCH4 1651 aa16.98■□□□□ 0.31
AC009404.1-202ENST00000439955 AMOTL2Q9Y2J4 779 aa16.98■□□□□ 0.31
AC009404.1-202ENST00000439955 ASXL1Q8IXJ9 1541 aa16.97■□□□□ 0.31
AC009404.1-202ENST00000439955 MYO5BQ9ULV0 1848 aa16.97■□□□□ 0.31
AC009404.1-202ENST00000439955 ADAMTS2O95450 1211 aa16.96■□□□□ 0.31
AC009404.1-202ENST00000439955 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.96■□□□□ 0.31
AC009404.1-202ENST00000439955 TMEM131LA2VDJ0 1609 aa16.96■□□□□ 0.3
AC009404.1-202ENST00000439955 PTPRUQ92729 1446 aa16.96■□□□□ 0.3
AC009404.1-202ENST00000439955 LRRC59Q96AG4 307 aaKnown RBP16.94■□□□□ 0.3
AC009404.1-202ENST00000439955 NGLY1Q96IV0 654 aa16.94■□□□□ 0.3
AC009404.1-202ENST00000439955 SIN3AQ96ST3 1273 aa16.94■□□□□ 0.3
AC009404.1-202ENST00000439955 ZRANB1Q9UGI0 708 aa16.94■□□□□ 0.3
AC009404.1-202ENST00000439955 SPHKAPQ2M3C7 1700 aa16.93■□□□□ 0.3
AC009404.1-202ENST00000439955 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
AC009404.1-202ENST00000439955 PNPLA6Q8IY17 1366 aa16.93■□□□□ 0.3
AC009404.1-202ENST00000439955 PIK3R4Q99570 1358 aa16.92■□□□□ 0.3
AC009404.1-202ENST00000439955 TRPM2O94759 1503 aa16.92■□□□□ 0.3
AC009404.1-202ENST00000439955 MST1RQ04912 1400 aa16.92■□□□□ 0.3
AC009404.1-202ENST00000439955 SETBP1Q9Y6X0 1596 aa16.92■□□□□ 0.3
AC009404.1-202ENST00000439955 TONSLQ96HA7 1378 aa16.91■□□□□ 0.3
AC009404.1-202ENST00000439955 NEUROD1Q13562 356 aa16.9■□□□□ 0.3
AC009404.1-202ENST00000439955 CCDC144AA2RUR9 1427 aa16.88■□□□□ 0.29
AC009404.1-202ENST00000439955 DCCP43146 1447 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms