RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 FAM117AQ9C073 453 aa8.03□□□□□ -1.12
LSM1P1-201ENST00000438629 C3orf80F5H4A9 247 aa8.02□□□□□ -1.13
LSM1P1-201ENST00000438629 DIXDC1Q155Q3 683 aa8.02□□□□□ -1.13
LSM1P1-201ENST00000438629 ANKRD13DQ6ZTN6 518 aa8.02□□□□□ -1.13
LSM1P1-201ENST00000438629 RSPH6AQ9H0K4 717 aa8.02□□□□□ -1.13
LSM1P1-201ENST00000438629 MS4A1P11836 297 aa8.01□□□□□ -1.13
LSM1P1-201ENST00000438629 NLRP7Q8WX94 980 aa8.01□□□□□ -1.13
LSM1P1-201ENST00000438629 SEPT9Q9UHD8 586 aaPredicted RBP8.01□□□□□ -1.13
LSM1P1-201ENST00000438629 GOLGA8CPA6NN73 597 aa8□□□□□ -1.13
LSM1P1-201ENST00000438629 NECTIN2Q92692 538 aa8□□□□□ -1.13
LSM1P1-201ENST00000438629 BEGAINQ9BUH8 593 aa8□□□□□ -1.13
LSM1P1-201ENST00000438629 GOPCQ9HD26 462 aa8□□□□□ -1.13
LSM1P1-201ENST00000438629 SLF2Q8IX21 1173 aa7.99□□□□□ -1.13
LSM1P1-201ENST00000438629 DDX11L8A8MPP1 907 aa7.98□□□□□ -1.13
LSM1P1-201ENST00000438629 HRO43593 1189 aa7.98□□□□□ -1.13
LSM1P1-201ENST00000438629 SWT1Q5T5J6 900 aaKnown RBP7.98□□□□□ -1.13
LSM1P1-201ENST00000438629 ZFRQ96KR1 1074 aaKnown RBP7.98□□□□□ -1.13
LSM1P1-201ENST00000438629 PLEKHG3A1L390 1219 aa7.97□□□□□ -1.13
LSM1P1-201ENST00000438629 CD46P15529 392 aa7.97□□□□□ -1.13
LSM1P1-201ENST00000438629 POTEGQ6S5H5 508 aa7.97□□□□□ -1.13
LSM1P1-201ENST00000438629 RDH13Q8NBN7 331 aa7.97□□□□□ -1.13
LSM1P1-201ENST00000438629 POTEMA6NI47 508 aa7.96□□□□□ -1.14
LSM1P1-201ENST00000438629 NUTM1Q86Y26 1132 aa7.96□□□□□ -1.14
LSM1P1-201ENST00000438629 SAMD7Q7Z3H4 446 aa7.95□□□□□ -1.14
LSM1P1-201ENST00000438629 CDAN1Q8IWY9 1227 aa7.95□□□□□ -1.14
LSM1P1-201ENST00000438629 ANKK1Q8NFD2 765 aa7.95□□□□□ -1.14
LSM1P1-201ENST00000438629 LRCH3Q96II8 777 aa7.95□□□□□ -1.14
LSM1P1-201ENST00000438629 GTF3C3Q9Y5Q9 886 aa7.95□□□□□ -1.14
LSM1P1-201ENST00000438629 SKIV2LQ15477 1246 aaKnown RBP7.94□□□□□ -1.14
LSM1P1-201ENST00000438629 SH3D19Q5HYK7 790 aa7.94□□□□□ -1.14
LSM1P1-201ENST00000438629 PCMTD1Q96MG8 357 aaPredicted RBP7.94□□□□□ -1.14
LSM1P1-201ENST00000438629 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.94□□□□□ -1.14
LSM1P1-201ENST00000438629 USP46P62068 366 aa7.93□□□□□ -1.14
LSM1P1-201ENST00000438629 KRTAP3-3Q9BYR6 98 aa7.93□□□□□ -1.14
LSM1P1-201ENST00000438629 KRTAP3-2Q9BYR7 98 aa7.93□□□□□ -1.14
LSM1P1-201ENST00000438629 GCGRP47871 477 aa7.92□□□□□ -1.14
LSM1P1-201ENST00000438629 PRR14Q9BWN1 585 aa7.92□□□□□ -1.14
LSM1P1-201ENST00000438629 TBC1D2Q9BYX2 928 aa7.92□□□□□ -1.14
LSM1P1-201ENST00000438629 PCDH10Q9P2E7 1040 aa7.92□□□□□ -1.14
LSM1P1-201ENST00000438629 RNF40O75150 1001 aa7.91□□□□□ -1.14
LSM1P1-201ENST00000438629 KDM4AO75164 1064 aa7.91□□□□□ -1.14
LSM1P1-201ENST00000438629 KMT5BQ4FZB7 885 aa7.91□□□□□ -1.14
LSM1P1-201ENST00000438629 GRIPAP1Q4V328 841 aa7.91□□□□□ -1.14
LSM1P1-201ENST00000438629 ERICH6Q7L0X2 663 aa7.91□□□□□ -1.14
LSM1P1-201ENST00000438629 WNT2BQ93097 391 aa7.91□□□□□ -1.14
LSM1P1-201ENST00000438629 SOWAHBA6NEL2 793 aa7.9□□□□□ -1.14
LSM1P1-201ENST00000438629 SLC10A3P09131 477 aa7.9□□□□□ -1.14
LSM1P1-201ENST00000438629 GJA5P36382 358 aa7.9□□□□□ -1.14
LSM1P1-201ENST00000438629 SPIRE2Q8WWL2 714 aa7.9□□□□□ -1.14
LSM1P1-201ENST00000438629 ATP1B4Q9UN42 357 aaPredicted RBP7.9□□□□□ -1.14
LSM1P1-201ENST00000438629 PPP4CP60510 307 aa7.89□□□□□ -1.15
LSM1P1-201ENST00000438629 MYSM1Q5VVJ2 828 aa7.88□□□□□ -1.15
LSM1P1-201ENST00000438629 RIC3Q7Z5B4 369 aa7.88□□□□□ -1.15
LSM1P1-201ENST00000438629 TSR3Q9UJK0 312 aaKnown RBP7.88□□□□□ -1.15
LSM1P1-201ENST00000438629 CFHP08603 1231 aa7.87□□□□□ -1.15
LSM1P1-201ENST00000438629 TUSC1Q2TAM9 212 aa7.87□□□□□ -1.15
LSM1P1-201ENST00000438629 POLR3EQ9NVU0 708 aa7.87□□□□□ -1.15
LSM1P1-201ENST00000438629 SPTLC1O15269 473 aa7.86□□□□□ -1.15
LSM1P1-201ENST00000438629 CLK2P49760 499 aaKnown RBP7.86□□□□□ -1.15
LSM1P1-201ENST00000438629 HPS5Q9UPZ3 1129 aa7.86□□□□□ -1.15
LSM1P1-201ENST00000438629 ATP6V1AP38606 617 aa7.85□□□□□ -1.15
LSM1P1-201ENST00000438629 RSBN1LQ6PCB5 846 aaPredicted RBP7.84□□□□□ -1.15
LSM1P1-201ENST00000438629 NYAP1Q6ZVC0 841 aa7.84□□□□□ -1.15
LSM1P1-201ENST00000438629 MOXD2PA6NHM9 499 aa7.83□□□□□ -1.16
LSM1P1-201ENST00000438629 HOXA2O43364 376 aa7.83□□□□□ -1.16
LSM1P1-201ENST00000438629 ACTN4O43707 911 aaKnown RBP7.83□□□□□ -1.16
LSM1P1-201ENST00000438629 BCAMP50895 628 aa7.83□□□□□ -1.16
LSM1P1-201ENST00000438629 THSD4Q6ZMP0 1018 aa7.83□□□□□ -1.16
LSM1P1-201ENST00000438629 KCTD12Q96CX2 325 aaKnown RBP7.83□□□□□ -1.16
LSM1P1-201ENST00000438629 FDX1P10109 184 aa7.82□□□□□ -1.16
LSM1P1-201ENST00000438629 PRPF38BQ5VTL8 546 aaKnown RBP7.82□□□□□ -1.16
LSM1P1-201ENST00000438629 PROCA1Q8NCQ7 364 aaPredicted RBP7.82□□□□□ -1.16
LSM1P1-201ENST00000438629 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.82□□□□□ -1.16
LSM1P1-201ENST00000438629 NDUFV2P19404 249 aa7.81□□□□□ -1.16
LSM1P1-201ENST00000438629 FUT2Q10981 343 aa7.81□□□□□ -1.16
LSM1P1-201ENST00000438629 LIMD1Q9UGP4 676 aa7.81□□□□□ -1.16
LSM1P1-201ENST00000438629 MYT1LQ9UL68 1186 aa7.81□□□□□ -1.16
LSM1P1-201ENST00000438629 Q3C1V9 767 aa7.8□□□□□ -1.16
LSM1P1-201ENST00000438629 SPDYE5A6NIY4 337 aa7.79□□□□□ -1.16
LSM1P1-201ENST00000438629 NUTM2BA6NNL0 878 aaPredicted RBP7.79□□□□□ -1.16
LSM1P1-201ENST00000438629 NUTM2EB1AL46 878 aaPredicted RBP7.79□□□□□ -1.16
LSM1P1-201ENST00000438629 FLIIQ13045 1269 aa7.79□□□□□ -1.16
LSM1P1-201ENST00000438629 TMEM259Q4ZIN3 620 aa7.79□□□□□ -1.16
LSM1P1-201ENST00000438629 NUTM2DQ5VT03 806 aaPredicted RBP7.79□□□□□ -1.16
LSM1P1-201ENST00000438629 PPP2R2DQ66LE6 453 aa7.79□□□□□ -1.16
LSM1P1-201ENST00000438629 NUTM2AQ8IVF1 878 aaPredicted RBP7.79□□□□□ -1.16
LSM1P1-201ENST00000438629 ZBTB3Q9H5J0 574 aa7.79□□□□□ -1.16
LSM1P1-201ENST00000438629 WBP1LQ9NX94 342 aa7.79□□□□□ -1.16
LSM1P1-201ENST00000438629 LILRB3O75022 631 aa7.78□□□□□ -1.16
LSM1P1-201ENST00000438629 NR1I2O75469 434 aa7.78□□□□□ -1.16
LSM1P1-201ENST00000438629 APLP1P51693 650 aa7.78□□□□□ -1.16
LSM1P1-201ENST00000438629 MORN1Q5T089 497 aa7.78□□□□□ -1.16
LSM1P1-201ENST00000438629 PCDHB3Q9Y5E6 796 aa7.78□□□□□ -1.16
LSM1P1-201ENST00000438629 CSPP1Q1MSJ5 1256 aa7.77□□□□□ -1.17
LSM1P1-201ENST00000438629 MTMR2Q13614 643 aa7.76□□□□□ -1.17
LSM1P1-201ENST00000438629 BANK1Q8NDB2 785 aa7.76□□□□□ -1.17
LSM1P1-201ENST00000438629 SALL2Q9Y467 1007 aaPredicted RBP7.76□□□□□ -1.17
LSM1P1-201ENST00000438629 PCDHB15Q9Y5E8 787 aa7.76□□□□□ -1.17
LSM1P1-201ENST00000438629 HRCP23327 699 aa7.75□□□□□ -1.17
LSM1P1-201ENST00000438629 RFC5P40937 340 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms