RNA–Protein interactions for RNA: ENST00000435953.2

AC004448.3-201, humanhuman

TSL 2 BASIC

Gene AC004448.3, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004448.3-201ENST00000435953 ZFYVE9O95405 1425 aa14.06□□□□□ -0.16
AC004448.3-201ENST00000435953 RIMS2Q9UQ26 1411 aa14.06□□□□□ -0.16
AC004448.3-201ENST00000435953 TMEM131LA2VDJ0 1609 aa14.05□□□□□ -0.16
AC004448.3-201ENST00000435953 LTKP29376 864 aa14.05□□□□□ -0.16
AC004448.3-201ENST00000435953 C14orf93Q9H972 538 aaKnown RBP14.05□□□□□ -0.16
AC004448.3-201ENST00000435953 NBPF1Q3BBV0 1214 aa14.04□□□□□ -0.16
AC004448.3-201ENST00000435953 CFAP70Q5T0N1 1121 aa14.04□□□□□ -0.16
AC004448.3-201ENST00000435953 PRAG1Q86YV5 1406 aa14.04□□□□□ -0.16
AC004448.3-201ENST00000435953 ANKLE2Q86XL3 938 aa14.03□□□□□ -0.16
AC004448.3-201ENST00000435953 KIF1BO60333 1816 aa14.01□□□□□ -0.17
AC004448.3-201ENST00000435953 MYOM2P54296 1465 aa14.01□□□□□ -0.17
AC004448.3-201ENST00000435953 NRXN1Q9ULB1 1477 aa14□□□□□ -0.17
AC004448.3-201ENST00000435953 BCANQ96GW7 911 aa14□□□□□ -0.17
AC004448.3-201ENST00000435953 CARD11Q9BXL7 1154 aa14□□□□□ -0.17
AC004448.3-201ENST00000435953 SENP3Q9H4L4 574 aaPredicted RBP14□□□□□ -0.17
AC004448.3-201ENST00000435953 SETD1BQ9UPS6 1966 aaKnown RBP14□□□□□ -0.17
AC004448.3-201ENST00000435953 NEXMIFQ5QGS0 1516 aa14□□□□□ -0.17
AC004448.3-201ENST00000435953 ARHGAP23Q9P227 1491 aa13.99□□□□□ -0.17
AC004448.3-201ENST00000435953 ROCK2O75116 1388 aaKnown RBP13.98□□□□□ -0.17
AC004448.3-201ENST00000435953 AEBP2Q6ZN18 517 aaPredicted RBP13.98□□□□□ -0.17
AC004448.3-201ENST00000435953 PIK3C2GO75747 1445 aa13.98□□□□□ -0.17
AC004448.3-201ENST00000435953 CEP170BQ9Y4F5 1589 aaPredicted RBP13.97□□□□□ -0.17
AC004448.3-201ENST00000435953 SLIT1O75093 1534 aa13.97□□□□□ -0.17
AC004448.3-201ENST00000435953 EIF4G2P78344 907 aaKnown RBP eCLIP13.97□□□□□ -0.17
AC004448.3-201ENST00000435953 TMEM132EQ6IEE7 984 aa13.97□□□□□ -0.17
AC004448.3-201ENST00000435953 KDM5AP29375 1690 aaKnown RBP13.96□□□□□ -0.17
AC004448.3-201ENST00000435953 TBX22Q9Y458 520 aa13.96□□□□□ -0.17
AC004448.3-201ENST00000435953 GPRASP1Q5JY77 1395 aa13.96□□□□□ -0.18
AC004448.3-201ENST00000435953 PLEKHG1Q9ULL1 1385 aa13.96□□□□□ -0.18
AC004448.3-201ENST00000435953 UBR1Q8IWV7 1749 aa13.95□□□□□ -0.18
AC004448.3-201ENST00000435953 NCKAP5LQ9HCH0 1330 aa13.95□□□□□ -0.18
AC004448.3-201ENST00000435953 RALGAPBQ86X10 1494 aa13.95□□□□□ -0.18
AC004448.3-201ENST00000435953 MYO3AQ8NEV4 1616 aa13.95□□□□□ -0.18
AC004448.3-201ENST00000435953 HSPA5P11021 654 aaKnown RBP13.95□□□□□ -0.18
AC004448.3-201ENST00000435953 HSPA2P54652 639 aa13.95□□□□□ -0.18
AC004448.3-201ENST00000435953 SLC26A8Q96RN1 970 aa13.94□□□□□ -0.18
AC004448.3-201ENST00000435953 HIRIP3Q9BW71 556 aaPredicted RBP13.93□□□□□ -0.18
AC004448.3-201ENST00000435953 SCAF11Q99590 1463 aaKnown RBP13.93□□□□□ -0.18
AC004448.3-201ENST00000435953 ZNF316A6NFI3 1004 aaPredicted RBP13.92□□□□□ -0.18
AC004448.3-201ENST00000435953 ST20-MTHFSA0A0A6YYL1 179 aa13.91□□□□□ -0.18
AC004448.3-201ENST00000435953 STK26Q9P289 416 aa13.91□□□□□ -0.18
AC004448.3-201ENST00000435953 TRAK1Q9UPV9 953 aa13.91□□□□□ -0.18
AC004448.3-201ENST00000435953 PPLO60437 1756 aa13.91□□□□□ -0.18
AC004448.3-201ENST00000435953 USP47Q96K76 1375 aa13.9□□□□□ -0.18
AC004448.3-201ENST00000435953 IFT172Q9UG01 1749 aa13.9□□□□□ -0.18
AC004448.3-201ENST00000435953 ADAMTS13Q76LX8 1427 aa13.9□□□□□ -0.19
AC004448.3-201ENST00000435953 METP08581 1390 aa13.89□□□□□ -0.19
AC004448.3-201ENST00000435953 MYO5BQ9ULV0 1848 aa13.89□□□□□ -0.19
AC004448.3-201ENST00000435953 MED14O60244 1454 aa13.88□□□□□ -0.19
AC004448.3-201ENST00000435953 LMTK3Q96Q04 1460 aa13.88□□□□□ -0.19
AC004448.3-201ENST00000435953 SIRT1Q96EB6 747 aa13.88□□□□□ -0.19
AC004448.3-201ENST00000435953 ALKQ9UM73 1620 aa13.88□□□□□ -0.19
AC004448.3-201ENST00000435953 ZNF142P52746 1687 aaPredicted RBP13.88□□□□□ -0.19
AC004448.3-201ENST00000435953 NPHP4O75161 1426 aaPredicted RBP13.87□□□□□ -0.19
AC004448.3-201ENST00000435953 TRPM1Q7Z4N2 1603 aa13.86□□□□□ -0.19
AC004448.3-201ENST00000435953 LRPPRCP42704 1394 aaKnown RBP13.86□□□□□ -0.19
AC004448.3-201ENST00000435953 ABCC11Q96J66 1382 aa13.86□□□□□ -0.19
AC004448.3-201ENST00000435953 AMOTL2Q9Y2J4 779 aa13.86□□□□□ -0.19
AC004448.3-201ENST00000435953 SETBP1Q9Y6X0 1596 aa13.86□□□□□ -0.19
AC004448.3-201ENST00000435953 ADGRB1O14514 1584 aa13.85□□□□□ -0.19
AC004448.3-201ENST00000435953 YTHDC2Q9H6S0 1430 aaKnown RBP13.85□□□□□ -0.19
AC004448.3-201ENST00000435953 SLC24A1O60721 1099 aa13.84□□□□□ -0.19
AC004448.3-201ENST00000435953 TESK2Q96S53 571 aa13.84□□□□□ -0.19
AC004448.3-201ENST00000435953 POGKQ9P215 609 aa13.84□□□□□ -0.19
AC004448.3-201ENST00000435953 KIAA1210Q9ULL0 1709 aa13.84□□□□□ -0.19
AC004448.3-201ENST00000435953 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.19
AC004448.3-201ENST00000435953 PIK3R4Q99570 1358 aa13.83□□□□□ -0.19
AC004448.3-201ENST00000435953 C11orf95C9JLR9 678 aaPredicted RBP13.83□□□□□ -0.2
AC004448.3-201ENST00000435953 PRAM1Q96QH2 718 aa13.83□□□□□ -0.2
AC004448.3-201ENST00000435953 DMRT2Q9Y5R5 561 aa13.83□□□□□ -0.2
AC004448.3-201ENST00000435953 CENPJQ9HC77 1338 aaPredicted RBP13.83□□□□□ -0.2
AC004448.3-201ENST00000435953 KCNA6P17658 529 aa13.82□□□□□ -0.2
AC004448.3-201ENST00000435953 WAPLQ7Z5K2 1190 aa13.82□□□□□ -0.2
AC004448.3-201ENST00000435953 PTPRUQ92729 1446 aa13.81□□□□□ -0.2
AC004448.3-201ENST00000435953 NRXN3Q9Y4C0 1643 aa13.8□□□□□ -0.2
AC004448.3-201ENST00000435953 TMF1P82094 1093 aa13.8□□□□□ -0.2
AC004448.3-201ENST00000435953 ASXL1Q8IXJ9 1541 aa13.8□□□□□ -0.2
AC004448.3-201ENST00000435953 LAMC1P11047 1609 aa13.79□□□□□ -0.2
AC004448.3-201ENST00000435953 SAFB2Q14151 953 aaKnown RBP eCLIP13.79□□□□□ -0.2
AC004448.3-201ENST00000435953 TECPR2O15040 1411 aa13.78□□□□□ -0.2
AC004448.3-201ENST00000435953 FAM135BQ49AJ0 1406 aa13.77□□□□□ -0.21
AC004448.3-201ENST00000435953 WASHC2AQ641Q2 1341 aa13.77□□□□□ -0.21
AC004448.3-201ENST00000435953 ROBO2Q9HCK4 1378 aa13.77□□□□□ -0.21
AC004448.3-201ENST00000435953 DIP2AQ14689 1571 aa13.76□□□□□ -0.21
AC004448.3-201ENST00000435953 PLEKHH1Q9ULM0 1364 aa13.76□□□□□ -0.21
AC004448.3-201ENST00000435953 CDCA8Q53HL2 280 aa13.76□□□□□ -0.21
AC004448.3-201ENST00000435953 SBNO2Q9Y2G9 1366 aa13.75□□□□□ -0.21
AC004448.3-201ENST00000435953 KIF7Q2M1P5 1343 aa13.75□□□□□ -0.21
AC004448.3-201ENST00000435953 MINK1Q8N4C8 1332 aaPredicted RBP13.75□□□□□ -0.21
AC004448.3-201ENST00000435953 IQGAP1P46940 1657 aa13.75□□□□□ -0.21
AC004448.3-201ENST00000435953 DLC1Q96QB1 1528 aa13.74□□□□□ -0.21
AC004448.3-201ENST00000435953 CCDC7Q96M83 1385 aa13.74□□□□□ -0.21
AC004448.3-201ENST00000435953 EVC2Q86UK5 1308 aa13.74□□□□□ -0.21
AC004448.3-201ENST00000435953 PROSER2Q86WR7 435 aaPredicted RBP13.74□□□□□ -0.21
AC004448.3-201ENST00000435953 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
AC004448.3-201ENST00000435953 POLR3GLQ9BT43 218 aa13.74□□□□□ -0.21
AC004448.3-201ENST00000435953 DDX10Q13206 875 aaKnown RBP13.73□□□□□ -0.21
AC004448.3-201ENST00000435953 CDK19Q9BWU1 502 aa13.73□□□□□ -0.21
AC004448.3-201ENST00000435953 SETD1AO15047 1707 aaKnown RBP13.73□□□□□ -0.21
AC004448.3-201ENST00000435953 DISP3Q9P2K9 1392 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms