RNA–Protein interactions for RNA: ENST00000435197.2

SMG1P3-201, Transcript of SMG1 pseudogene 3, humanhuman

TSL 3

Gene SMG1P3, Length 416 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-201ENST00000435197 MSH6P52701 1360 aa28.3■■■□□ 2.12
SMG1P3-201ENST00000435197 CHD2O14647 1828 aaKnown RBP28.29■■■□□ 2.12
SMG1P3-201ENST00000435197 GCC2Q8IWJ2 1684 aa28.27■■■□□ 2.12
SMG1P3-201ENST00000435197 CHIC2Q9UKJ5 165 aa28.27■■■□□ 2.12
SMG1P3-201ENST00000435197 SLC52A1Q9NWF4 448 aa28.25■■■□□ 2.11
SMG1P3-201ENST00000435197 COL16A1Q07092 1604 aaPredicted RBP28.24■■■□□ 2.11
SMG1P3-201ENST00000435197 ZFYVE9O95405 1425 aa28.24■■■□□ 2.11
SMG1P3-201ENST00000435197 JCADQ9P266 1359 aa28.24■■■□□ 2.11
SMG1P3-201ENST00000435197 RPRD2Q5VT52 1461 aaKnown RBP28.23■■■□□ 2.11
SMG1P3-201ENST00000435197 BCANQ96GW7 911 aa28.23■■■□□ 2.11
SMG1P3-201ENST00000435197 SLAIN2Q9P270 581 aa28.23■■■□□ 2.11
SMG1P3-201ENST00000435197 ADGRL2O95490 1459 aa28.22■■■□□ 2.11
SMG1P3-201ENST00000435197 PLEKHG1Q9ULL1 1385 aa28.22■■■□□ 2.11
SMG1P3-201ENST00000435197 TMEM131LA2VDJ0 1609 aa28.2■■■□□ 2.1
SMG1P3-201ENST00000435197 APLP2Q06481 763 aa28.19■■■□□ 2.1
SMG1P3-201ENST00000435197 RIMS2Q9UQ26 1411 aa28.18■■■□□ 2.1
SMG1P3-201ENST00000435197 LRP6O75581 1613 aa28.14■■■□□ 2.09
SMG1P3-201ENST00000435197 NCOA3Q9Y6Q9 1424 aa28.13■■■□□ 2.09
SMG1P3-201ENST00000435197 PPP1R15AO75807 674 aaPredicted RBP28.13■■■□□ 2.09
SMG1P3-201ENST00000435197 ANKRD50Q9ULJ7 1429 aa28.12■■■□□ 2.09
SMG1P3-201ENST00000435197 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.12■■■□□ 2.09
SMG1P3-201ENST00000435197 SHPRHQ149N8 1683 aa28.11■■■□□ 2.09
SMG1P3-201ENST00000435197 AHDC1Q5TGY3 1603 aaPredicted RBP28.1■■■□□ 2.09
SMG1P3-201ENST00000435197 DIP2AQ14689 1571 aa28.1■■■□□ 2.09
SMG1P3-201ENST00000435197 UNC13BO14795 1591 aa28.09■■■□□ 2.09
SMG1P3-201ENST00000435197 HDGFP51858 240 aaKnown RBP28.09■■■□□ 2.09
SMG1P3-201ENST00000435197 TBX22Q9Y458 520 aa28.09■■■□□ 2.09
SMG1P3-201ENST00000435197 SPATA31A6Q5VVP1 1343 aa28.08■■■□□ 2.09
SMG1P3-201ENST00000435197 ADAMTS13Q76LX8 1427 aa28.07■■■□□ 2.08
SMG1P3-201ENST00000435197 E9PCH4 1651 aa28.07■■■□□ 2.08
SMG1P3-201ENST00000435197 C14orf37Q86TY3 774 aa28.05■■■□□ 2.08
SMG1P3-201ENST00000435197 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.03■■■□□ 2.08
SMG1P3-201ENST00000435197 MEX3CQ5U5Q3 659 aaKnown RBP28.02■■■□□ 2.08
SMG1P3-201ENST00000435197 PIK3R4Q99570 1358 aa28.01■■■□□ 2.07
SMG1P3-201ENST00000435197 ZNF772Q68DY9 489 aaPredicted RBP28.01■■■□□ 2.07
SMG1P3-201ENST00000435197 CADPS2Q86UW7 1296 aa28.01■■■□□ 2.07
SMG1P3-201ENST00000435197 FAM50AQ14320 339 aaKnown RBP28■■■□□ 2.07
SMG1P3-201ENST00000435197 TRPM2O94759 1503 aa28■■■□□ 2.07
SMG1P3-201ENST00000435197 CHGAP10645 457 aaKnown RBP27.99■■■□□ 2.07
SMG1P3-201ENST00000435197 C19orf44Q9H6X5 657 aa27.99■■■□□ 2.07
SMG1P3-201ENST00000435197 NUTM2DQ5VT03 806 aaPredicted RBP27.98■■■□□ 2.07
SMG1P3-201ENST00000435197 IQGAP3Q86VI3 1631 aa27.97■■■□□ 2.07
SMG1P3-201ENST00000435197 ATF3P18847 181 aa27.97■■■□□ 2.07
SMG1P3-201ENST00000435197 UPF1Q92900 1129 aaKnown RBP eCLIP27.96■■■□□ 2.07
SMG1P3-201ENST00000435197 TRIM52Q96A61 297 aa27.96■■■□□ 2.07
SMG1P3-201ENST00000435197 PTPRUQ92729 1446 aa27.93■■■□□ 2.06
SMG1P3-201ENST00000435197 XRN1Q8IZH2 1706 aaKnown RBP27.92■■■□□ 2.06
SMG1P3-201ENST00000435197 BRINP3Q76B58 766 aa27.91■■■□□ 2.06
SMG1P3-201ENST00000435197 DCCP43146 1447 aa27.91■■■□□ 2.06
SMG1P3-201ENST00000435197 NHSL1Q5SYE7 1610 aa27.9■■■□□ 2.06
SMG1P3-201ENST00000435197 NRXN3Q9Y4C0 1643 aa27.9■■■□□ 2.06
SMG1P3-201ENST00000435197 ASXL1Q8IXJ9 1541 aa27.9■■■□□ 2.06
SMG1P3-201ENST00000435197 CDK12Q9NYV4 1490 aaPredicted RBP27.89■■■□□ 2.06
SMG1P3-201ENST00000435197 AMOTL2Q9Y2J4 779 aa27.89■■■□□ 2.06
SMG1P3-201ENST00000435197 RXRBP28702 533 aa27.87■■■□□ 2.05
SMG1P3-201ENST00000435197 SETBP1Q9Y6X0 1596 aa27.86■■■□□ 2.05
SMG1P3-201ENST00000435197 NUTM2BA6NNL0 878 aaPredicted RBP27.85■■■□□ 2.05
SMG1P3-201ENST00000435197 NUTM2EB1AL46 878 aaPredicted RBP27.85■■■□□ 2.05
SMG1P3-201ENST00000435197 NUTM2AQ8IVF1 878 aaPredicted RBP27.85■■■□□ 2.05
SMG1P3-201ENST00000435197 SETD5Q9C0A6 1442 aa27.84■■■□□ 2.05
SMG1P3-201ENST00000435197 ROCK1Q13464 1354 aa27.84■■■□□ 2.05
SMG1P3-201ENST00000435197 MST1RQ04912 1400 aa27.84■■■□□ 2.05
SMG1P3-201ENST00000435197 SPHKAPQ2M3C7 1700 aa27.81■■■□□ 2.04
SMG1P3-201ENST00000435197 AFF2P51816 1311 aa27.81■■■□□ 2.04
SMG1P3-201ENST00000435197 NUP155O75694 1391 aa27.78■■■□□ 2.04
SMG1P3-201ENST00000435197 NALCNQ8IZF0 1738 aa27.77■■■□□ 2.04
SMG1P3-201ENST00000435197 RGS12O14924 1447 aa27.74■■■□□ 2.03
SMG1P3-201ENST00000435197 ADGRL3Q9HAR2 1447 aa27.74■■■□□ 2.03
SMG1P3-201ENST00000435197 LRRC59Q96AG4 307 aaKnown RBP27.73■■■□□ 2.03
SMG1P3-201ENST00000435197 METP08581 1390 aa27.73■■■□□ 2.03
SMG1P3-201ENST00000435197 PNPLA6Q8IY17 1366 aa27.73■■■□□ 2.03
SMG1P3-201ENST00000435197 C8orf37Q96NL8 207 aa27.69■■■□□ 2.02
SMG1P3-201ENST00000435197 NEXMIFQ5QGS0 1516 aa27.68■■■□□ 2.02
SMG1P3-201ENST00000435197 LAMC1P11047 1609 aa27.67■■■□□ 2.02
SMG1P3-201ENST00000435197 RBM6P78332 1123 aaKnown RBP27.67■■■□□ 2.02
SMG1P3-201ENST00000435197 ZNF326Q5BKZ1 582 aaKnown RBP27.67■■■□□ 2.02
SMG1P3-201ENST00000435197 DDX17Q92841 729 aaKnown RBP27.67■■■□□ 2.02
SMG1P3-201ENST00000435197 CLTCL1P53675 1640 aa27.66■■■□□ 2.02
SMG1P3-201ENST00000435197 QTRT2Q9H974 415 aaKnown RBP27.65■■■□□ 2.02
SMG1P3-201ENST00000435197 C1orf167Q5SNV9 1468 aa27.62■■■□□ 2.01
SMG1P3-201ENST00000435197 KIF1BO60333 1816 aa27.62■■■□□ 2.01
SMG1P3-201ENST00000435197 ITGAEP38570 1179 aa27.59■■■□□ 2.01
SMG1P3-201ENST00000435197 ADAMTS2O95450 1211 aa27.57■■■□□ 2
SMG1P3-201ENST00000435197 NGLY1Q96IV0 654 aa27.57■■■□□ 2
SMG1P3-201ENST00000435197 PTCH1Q13635 1447 aa27.57■■■□□ 2
SMG1P3-201ENST00000435197 COL22A1Q8NFW1 1626 aaPredicted RBP27.53■■■□□ 2
SMG1P3-201ENST00000435197 ATAD2Q6PL18 1390 aa27.53■■■□□ 2
SMG1P3-201ENST00000435197 SOS2Q07890 1332 aaPredicted RBP27.53■■■□□ 2
SMG1P3-201ENST00000435197 PRAG1Q86YV5 1406 aa27.5■■□□□ 1.99
SMG1P3-201ENST00000435197 ROBO2Q9HCK4 1378 aa27.5■■□□□ 1.99
SMG1P3-201ENST00000435197 ORAI2Q96SN7 254 aa27.49■■□□□ 1.99
SMG1P3-201ENST00000435197 USP21Q9UK80 565 aa27.49■■□□□ 1.99
SMG1P3-201ENST00000435197 TRPC5Q9UL62 973 aaPredicted RBP27.47■■□□□ 1.99
SMG1P3-201ENST00000435197 MARF1Q9Y4F3 1742 aaKnown RBP27.47■■□□□ 1.99
SMG1P3-201ENST00000435197 ATRNO75882 1429 aa27.46■■□□□ 1.99
SMG1P3-201ENST00000435197 FNBP4Q8N3X1 1017 aaPredicted RBP27.44■■□□□ 1.98
SMG1P3-201ENST00000435197 PPLO60437 1756 aa27.44■■□□□ 1.98
SMG1P3-201ENST00000435197 MYOM2P54296 1465 aa27.43■■□□□ 1.98
SMG1P3-201ENST00000435197 CDC42BPGQ6DT37 1551 aa27.42■■□□□ 1.98
SMG1P3-201ENST00000435197 HFM1A2PYH4 1435 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms