RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 TRIM52Q96A61 297 aa30.43■■■□□ 2.46
LMBR1-208ENST00000434278 PLEKHG1Q9ULL1 1385 aa30.42■■■□□ 2.46
LMBR1-208ENST00000434278 TOM1O60784 492 aa30.42■■■□□ 2.46
LMBR1-208ENST00000434278 HDGFP51858 240 aaKnown RBP30.42■■■□□ 2.46
LMBR1-208ENST00000434278 BCANQ96GW7 911 aa30.42■■■□□ 2.46
LMBR1-208ENST00000434278 PPP1R15AO75807 674 aaPredicted RBP30.41■■■□□ 2.46
LMBR1-208ENST00000434278 ALKQ9UM73 1620 aa30.4■■■□□ 2.46
LMBR1-208ENST00000434278 NUTM2DQ5VT03 806 aaPredicted RBP30.4■■■□□ 2.46
LMBR1-208ENST00000434278 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.39■■■□□ 2.46
LMBR1-208ENST00000434278 KCNA6P17658 529 aa30.38■■■□□ 2.45
LMBR1-208ENST00000434278 PIP4K2BP78356 416 aa30.38■■■□□ 2.45
LMBR1-208ENST00000434278 XIRP1Q702N8 1843 aaKnown RBP30.36■■■□□ 2.45
LMBR1-208ENST00000434278 SCAF1Q9H7N4 1312 aaKnown RBP30.36■■■□□ 2.45
LMBR1-208ENST00000434278 TRPM2O94759 1503 aa30.35■■■□□ 2.45
LMBR1-208ENST00000434278 CLTCL1P53675 1640 aa30.34■■■□□ 2.45
LMBR1-208ENST00000434278 SLC4A1APQ9BWU0 796 aaKnown RBP30.33■■■□□ 2.45
LMBR1-208ENST00000434278 NWD1Q149M9 1564 aa30.32■■■□□ 2.45
LMBR1-208ENST00000434278 ADAMTS13Q76LX8 1427 aa30.3■■■□□ 2.44
LMBR1-208ENST00000434278 TBX22Q9Y458 520 aa30.3■■■□□ 2.44
LMBR1-208ENST00000434278 TMEM94Q12767 1356 aa30.29■■■□□ 2.44
LMBR1-208ENST00000434278 CHD2O14647 1828 aaKnown RBP30.27■■■□□ 2.44
LMBR1-208ENST00000434278 ZNF326Q5BKZ1 582 aaKnown RBP30.27■■■□□ 2.44
LMBR1-208ENST00000434278 PROSER2Q86WR7 435 aaPredicted RBP30.27■■■□□ 2.44
LMBR1-208ENST00000434278 NKTRP30414 1462 aaKnown RBP30.26■■■□□ 2.44
LMBR1-208ENST00000434278 HSPA1LP34931 641 aa30.26■■■□□ 2.43
LMBR1-208ENST00000434278 RBM33Q96EV2 1170 aaKnown RBP30.26■■■□□ 2.43
LMBR1-208ENST00000434278 KIF1BO60333 1816 aa30.23■■■□□ 2.43
LMBR1-208ENST00000434278 DIP2AQ14689 1571 aa30.23■■■□□ 2.43
LMBR1-208ENST00000434278 FOXD1Q16676 465 aa30.22■■■□□ 2.43
LMBR1-208ENST00000434278 NRXN3Q9Y4C0 1643 aa30.2■■■□□ 2.43
LMBR1-208ENST00000434278 NEXMIFQ5QGS0 1516 aa30.2■■■□□ 2.42
LMBR1-208ENST00000434278 MPHOSPH9Q99550 1183 aa30.18■■■□□ 2.42
LMBR1-208ENST00000434278 SETD5Q9C0A6 1442 aa30.18■■■□□ 2.42
LMBR1-208ENST00000434278 PIK3R4Q99570 1358 aa30.16■■■□□ 2.42
LMBR1-208ENST00000434278 SETBP1Q9Y6X0 1596 aa30.16■■■□□ 2.42
LMBR1-208ENST00000434278 DISP3Q9P2K9 1392 aa30.14■■■□□ 2.41
LMBR1-208ENST00000434278 PTPRUQ92729 1446 aa30.13■■■□□ 2.41
LMBR1-208ENST00000434278 AMOTL2Q9Y2J4 779 aa30.1■■■□□ 2.41
LMBR1-208ENST00000434278 MSH6P52701 1360 aa30.09■■■□□ 2.41
LMBR1-208ENST00000434278 RAB3GAP2Q9H2M9 1393 aa30.08■■■□□ 2.41
LMBR1-208ENST00000434278 METP08581 1390 aa30.06■■■□□ 2.4
LMBR1-208ENST00000434278 ACIN1Q9UKV3 1341 aaKnown RBP30.06■■■□□ 2.4
LMBR1-208ENST00000434278 CCDC144AA2RUR9 1427 aa30.05■■■□□ 2.4
LMBR1-208ENST00000434278 FAM135BQ49AJ0 1406 aa30.05■■■□□ 2.4
LMBR1-208ENST00000434278 NCOA3Q9Y6Q9 1424 aa30.05■■■□□ 2.4
LMBR1-208ENST00000434278 RPGRIP1LQ68CZ1 1315 aa30.05■■■□□ 2.4
LMBR1-208ENST00000434278 XRN1Q8IZH2 1706 aaKnown RBP30.04■■■□□ 2.4
LMBR1-208ENST00000434278 VGFO15240 615 aaPredicted RBP30.03■■■□□ 2.4
LMBR1-208ENST00000434278 PPLO60437 1756 aa30.03■■■□□ 2.4
LMBR1-208ENST00000434278 C14orf37Q86TY3 774 aa30■■■□□ 2.39
LMBR1-208ENST00000434278 ROBO1Q9Y6N7 1651 aa30■■■□□ 2.39
LMBR1-208ENST00000434278 SPATA31E1Q6ZUB1 1445 aa29.99■■■□□ 2.39
LMBR1-208ENST00000434278 SLAIN2Q9P270 581 aa29.99■■■□□ 2.39
LMBR1-208ENST00000434278 SETD1AO15047 1707 aaKnown RBP29.96■■■□□ 2.39
LMBR1-208ENST00000434278 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.96■■■□□ 2.39
LMBR1-208ENST00000434278 RGL3Q3MIN7 710 aa29.96■■■□□ 2.39
LMBR1-208ENST00000434278 C19orf44Q9H6X5 657 aa29.96■■■□□ 2.39
LMBR1-208ENST00000434278 MED1Q15648 1581 aaPredicted RBP29.94■■■□□ 2.38
LMBR1-208ENST00000434278 ILDR2Q71H61 639 aa29.93■■■□□ 2.38
LMBR1-208ENST00000434278 ADGRF5Q8IZF2 1346 aa29.91■■■□□ 2.38
LMBR1-208ENST00000434278 CADPS2Q86UW7 1296 aa29.9■■■□□ 2.38
LMBR1-208ENST00000434278 IFT172Q9UG01 1749 aa29.9■■■□□ 2.38
LMBR1-208ENST00000434278 ATF3P18847 181 aa29.89■■■□□ 2.38
LMBR1-208ENST00000434278 HRCP23327 699 aa29.86■■■□□ 2.37
LMBR1-208ENST00000434278 ANKRD30BQ9BXX2 1392 aa29.86■■■□□ 2.37
LMBR1-208ENST00000434278 DCCP43146 1447 aa29.84■■■□□ 2.37
LMBR1-208ENST00000434278 PTCH1Q13635 1447 aa29.82■■■□□ 2.36
LMBR1-208ENST00000434278 ROBO2Q9HCK4 1378 aa29.82■■■□□ 2.36
LMBR1-208ENST00000434278 ADGRL3Q9HAR2 1447 aa29.81■■■□□ 2.36
LMBR1-208ENST00000434278 PHLPP1O60346 1717 aa29.81■■■□□ 2.36
LMBR1-208ENST00000434278 NALCNQ8IZF0 1738 aa29.81■■■□□ 2.36
LMBR1-208ENST00000434278 PRAG1Q86YV5 1406 aa29.8■■■□□ 2.36
LMBR1-208ENST00000434278 PIK3C2GO75747 1445 aa29.78■■■□□ 2.36
LMBR1-208ENST00000434278 MST1RQ04912 1400 aa29.78■■■□□ 2.36
LMBR1-208ENST00000434278 BRINP3Q76B58 766 aa29.75■■■□□ 2.35
LMBR1-208ENST00000434278 COL16A1Q07092 1604 aaPredicted RBP29.74■■■□□ 2.35
LMBR1-208ENST00000434278 ASXL1Q8IXJ9 1541 aa29.74■■■□□ 2.35
LMBR1-208ENST00000434278 AHDC1Q5TGY3 1603 aaPredicted RBP29.72■■■□□ 2.35
LMBR1-208ENST00000434278 NRXN1Q9ULB1 1477 aa29.72■■■□□ 2.35
LMBR1-208ENST00000434278 TMEM132EQ6IEE7 984 aa29.71■■■□□ 2.35
LMBR1-208ENST00000434278 PHF23Q9BUL5 403 aaPredicted RBP29.71■■■□□ 2.35
LMBR1-208ENST00000434278 MYOM2P54296 1465 aa29.71■■■□□ 2.35
LMBR1-208ENST00000434278 STK26Q9P289 416 aa29.69■■■□□ 2.34
LMBR1-208ENST00000434278 LRPPRCP42704 1394 aaKnown RBP29.68■■■□□ 2.34
LMBR1-208ENST00000434278 JCADQ9P266 1359 aa29.68■■■□□ 2.34
LMBR1-208ENST00000434278 TECPR2O15040 1411 aa29.68■■■□□ 2.34
LMBR1-208ENST00000434278 C14orf93Q9H972 538 aaKnown RBP29.67■■■□□ 2.34
LMBR1-208ENST00000434278 ABCC11Q96J66 1382 aa29.65■■■□□ 2.34
LMBR1-208ENST00000434278 C1orf167Q5SNV9 1468 aa29.64■■■□□ 2.34
LMBR1-208ENST00000434278 CFAP70Q5T0N1 1121 aa29.64■■■□□ 2.34
LMBR1-208ENST00000434278 YTHDC2Q9H6S0 1430 aaKnown RBP29.63■■■□□ 2.33
LMBR1-208ENST00000434278 KNDC1Q76NI1 1749 aa29.63■■■□□ 2.33
LMBR1-208ENST00000434278 WAPLQ7Z5K2 1190 aa29.63■■■□□ 2.33
LMBR1-208ENST00000434278 NHSL1Q5SYE7 1610 aa29.62■■■□□ 2.33
LMBR1-208ENST00000434278 SOCS7O14512 581 aa29.61■■■□□ 2.33
LMBR1-208ENST00000434278 RGS17Q9UGC6 210 aaPredicted RBP29.61■■■□□ 2.33
LMBR1-208ENST00000434278 LAMC1P11047 1609 aa29.6■■■□□ 2.33
LMBR1-208ENST00000434278 PLEKHH1Q9ULM0 1364 aa29.6■■■□□ 2.33
LMBR1-208ENST00000434278 DDX17Q92841 729 aaKnown RBP29.59■■■□□ 2.33
LMBR1-208ENST00000434278 CDC42BPGQ6DT37 1551 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms