RNA–Protein interactions for RNA: ENST00000433814.5

PCGF3-206, Transcript of polycomb group ring finger 3, humanhuman

TSL 4

Gene PCGF3, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-206ENST00000433814 NUP155O75694 1391 aa23.71■■□□□ 1.39
PCGF3-206ENST00000433814 IQGAP3Q86VI3 1631 aa23.69■■□□□ 1.38
PCGF3-206ENST00000433814 PPP1R15AO75807 674 aaPredicted RBP23.68■■□□□ 1.38
PCGF3-206ENST00000433814 RBM33Q96EV2 1170 aaKnown RBP23.68■■□□□ 1.38
PCGF3-206ENST00000433814 TMEM131LA2VDJ0 1609 aa23.67■■□□□ 1.38
PCGF3-206ENST00000433814 KCNA6P17658 529 aa23.67■■□□□ 1.38
PCGF3-206ENST00000433814 RIMS2Q9UQ26 1411 aa23.66■■□□□ 1.38
PCGF3-206ENST00000433814 NUTM2DQ5VT03 806 aaPredicted RBP23.65■■□□□ 1.38
PCGF3-206ENST00000433814 HDGFP51858 240 aaKnown RBP23.64■■□□□ 1.37
PCGF3-206ENST00000433814 PROSER2Q86WR7 435 aaPredicted RBP23.64■■□□□ 1.37
PCGF3-206ENST00000433814 ZFYVE9O95405 1425 aa23.63■■□□□ 1.37
PCGF3-206ENST00000433814 TMEM94Q12767 1356 aa23.63■■□□□ 1.37
PCGF3-206ENST00000433814 PLEKHG1Q9ULL1 1385 aa23.6■■□□□ 1.37
PCGF3-206ENST00000433814 RRBP1Q9P2E9 1410 aaKnown RBP23.59■■□□□ 1.37
PCGF3-206ENST00000433814 MED1Q15648 1581 aaPredicted RBP23.58■■□□□ 1.37
PCGF3-206ENST00000433814 SOCS7O14512 581 aa23.57■■□□□ 1.36
PCGF3-206ENST00000433814 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.57■■□□□ 1.36
PCGF3-206ENST00000433814 CHD2O14647 1828 aaKnown RBP23.55■■□□□ 1.36
PCGF3-206ENST00000433814 NWD1Q149M9 1564 aa23.54■■□□□ 1.36
PCGF3-206ENST00000433814 SPHKAPQ2M3C7 1700 aa23.53■■□□□ 1.36
PCGF3-206ENST00000433814 TBX22Q9Y458 520 aa23.53■■□□□ 1.36
PCGF3-206ENST00000433814 NKTRP30414 1462 aaKnown RBP23.52■■□□□ 1.36
PCGF3-206ENST00000433814 NAIPQ13075 1403 aa23.5■■□□□ 1.35
PCGF3-206ENST00000433814 ZNF326Q5BKZ1 582 aaKnown RBP23.5■■□□□ 1.35
PCGF3-206ENST00000433814 TRIM52Q96A61 297 aa23.49■■□□□ 1.35
PCGF3-206ENST00000433814 PHF23Q9BUL5 403 aaPredicted RBP23.49■■□□□ 1.35
PCGF3-206ENST00000433814 MSH6P52701 1360 aa23.48■■□□□ 1.35
PCGF3-206ENST00000433814 FAM135BQ49AJ0 1406 aa23.48■■□□□ 1.35
PCGF3-206ENST00000433814 ADAMTS13Q76LX8 1427 aa23.48■■□□□ 1.35
PCGF3-206ENST00000433814 C14orf37Q86TY3 774 aa23.47■■□□□ 1.35
PCGF3-206ENST00000433814 ROBO1Q9Y6N7 1651 aa23.47■■□□□ 1.35
PCGF3-206ENST00000433814 SLAIN2Q9P270 581 aa23.43■■□□□ 1.34
PCGF3-206ENST00000433814 CLTCL1P53675 1640 aa23.42■■□□□ 1.34
PCGF3-206ENST00000433814 DIP2AQ14689 1571 aa23.42■■□□□ 1.34
PCGF3-206ENST00000433814 AMOTL2Q9Y2J4 779 aa23.41■■□□□ 1.34
PCGF3-206ENST00000433814 HFM1A2PYH4 1435 aa23.4■■□□□ 1.34
PCGF3-206ENST00000433814 KIF1BO60333 1816 aa23.4■■□□□ 1.34
PCGF3-206ENST00000433814 TRPM2O94759 1503 aa23.39■■□□□ 1.34
PCGF3-206ENST00000433814 PIK3R4Q99570 1358 aa23.39■■□□□ 1.33
PCGF3-206ENST00000433814 PTPRUQ92729 1446 aa23.38■■□□□ 1.33
PCGF3-206ENST00000433814 SLC4A1APQ9BWU0 796 aaKnown RBP23.37■■□□□ 1.33
PCGF3-206ENST00000433814 NRXN3Q9Y4C0 1643 aa23.37■■□□□ 1.33
PCGF3-206ENST00000433814 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.36■■□□□ 1.33
PCGF3-206ENST00000433814 PHLPP1O60346 1717 aa23.34■■□□□ 1.33
PCGF3-206ENST00000433814 ATF3P18847 181 aa23.34■■□□□ 1.33
PCGF3-206ENST00000433814 C19orf44Q9H6X5 657 aa23.34■■□□□ 1.33
PCGF3-206ENST00000433814 NCOA3Q9Y6Q9 1424 aa23.33■■□□□ 1.33
PCGF3-206ENST00000433814 SETBP1Q9Y6X0 1596 aa23.33■■□□□ 1.33
PCGF3-206ENST00000433814 NEXMIFQ5QGS0 1516 aa23.33■■□□□ 1.32
PCGF3-206ENST00000433814 METP08581 1390 aa23.32■■□□□ 1.32
PCGF3-206ENST00000433814 FOXD1Q16676 465 aa23.32■■□□□ 1.32
PCGF3-206ENST00000433814 CADPS2Q86UW7 1296 aa23.31■■□□□ 1.32
PCGF3-206ENST00000433814 RGS17Q9UGC6 210 aaPredicted RBP23.29■■□□□ 1.32
PCGF3-206ENST00000433814 XRN1Q8IZH2 1706 aaKnown RBP23.28■■□□□ 1.32
PCGF3-206ENST00000433814 VGFO15240 615 aaPredicted RBP23.24■■□□□ 1.31
PCGF3-206ENST00000433814 JCADQ9P266 1359 aa23.22■■□□□ 1.31
PCGF3-206ENST00000433814 COL16A1Q07092 1604 aaPredicted RBP23.22■■□□□ 1.31
PCGF3-206ENST00000433814 RPGRIP1LQ68CZ1 1315 aa23.2■■□□□ 1.3
PCGF3-206ENST00000433814 BRINP3Q76B58 766 aa23.2■■□□□ 1.3
PCGF3-206ENST00000433814 MPHOSPH9Q99550 1183 aa23.2■■□□□ 1.3
PCGF3-206ENST00000433814 PPLO60437 1756 aa23.19■■□□□ 1.3
PCGF3-206ENST00000433814 RGL3Q3MIN7 710 aa23.18■■□□□ 1.3
PCGF3-206ENST00000433814 POTEAQ6S8J7 498 aa23.18■■□□□ 1.3
PCGF3-206ENST00000433814 DCCP43146 1447 aa23.16■■□□□ 1.3
PCGF3-206ENST00000433814 SETD1AO15047 1707 aaKnown RBP23.16■■□□□ 1.3
PCGF3-206ENST00000433814 NALCNQ8IZF0 1738 aa23.16■■□□□ 1.3
PCGF3-206ENST00000433814 AHDC1Q5TGY3 1603 aaPredicted RBP23.15■■□□□ 1.3
PCGF3-206ENST00000433814 CCDC144AA2RUR9 1427 aa23.15■■□□□ 1.3
PCGF3-206ENST00000433814 MST1RQ04912 1400 aa23.15■■□□□ 1.3
PCGF3-206ENST00000433814 ADGRL3Q9HAR2 1447 aa23.14■■□□□ 1.29
PCGF3-206ENST00000433814 MEX3CQ5U5Q3 659 aaKnown RBP23.12■■□□□ 1.29
PCGF3-206ENST00000433814 ASXL1Q8IXJ9 1541 aa23.12■■□□□ 1.29
PCGF3-206ENST00000433814 ROBO2Q9HCK4 1378 aa23.12■■□□□ 1.29
PCGF3-206ENST00000433814 DDX17Q92841 729 aaKnown RBP23.11■■□□□ 1.29
PCGF3-206ENST00000433814 ADGRF5Q8IZF2 1346 aa23.1■■□□□ 1.29
PCGF3-206ENST00000433814 SPATA31A6Q5VVP1 1343 aa23.09■■□□□ 1.29
PCGF3-206ENST00000433814 SETD5Q9C0A6 1442 aa23.09■■□□□ 1.29
PCGF3-206ENST00000433814 LRP6O75581 1613 aa23.09■■□□□ 1.29
PCGF3-206ENST00000433814 NUTM2BA6NNL0 878 aaPredicted RBP23.09■■□□□ 1.29
PCGF3-206ENST00000433814 NUTM2EB1AL46 878 aaPredicted RBP23.09■■□□□ 1.29
PCGF3-206ENST00000433814 NUTM2AQ8IVF1 878 aaPredicted RBP23.09■■□□□ 1.29
PCGF3-206ENST00000433814 SHPRHQ149N8 1683 aa23.09■■□□□ 1.29
PCGF3-206ENST00000433814 PTCH1Q13635 1447 aa23.08■■□□□ 1.28
PCGF3-206ENST00000433814 SPATA31E1Q6ZUB1 1445 aa23.07■■□□□ 1.28
PCGF3-206ENST00000433814 STK26Q9P289 416 aa23.06■■□□□ 1.28
PCGF3-206ENST00000433814 NHSL1Q5SYE7 1610 aa23.06■■□□□ 1.28
PCGF3-206ENST00000433814 IFT172Q9UG01 1749 aa23.05■■□□□ 1.28
PCGF3-206ENST00000433814 C1orf167Q5SNV9 1468 aa23.04■■□□□ 1.28
PCGF3-206ENST00000433814 LRRC59Q96AG4 307 aaKnown RBP23.03■■□□□ 1.28
PCGF3-206ENST00000433814 ORAI2Q96SN7 254 aa23.03■■□□□ 1.28
PCGF3-206ENST00000433814 ANKRD30BQ9BXX2 1392 aa23.02■■□□□ 1.28
PCGF3-206ENST00000433814 TMEM132EQ6IEE7 984 aa23.02■■□□□ 1.28
PCGF3-206ENST00000433814 RAB3GAP2Q9H2M9 1393 aa23.01■■□□□ 1.27
PCGF3-206ENST00000433814 ACIN1Q9UKV3 1341 aaKnown RBP23■■□□□ 1.27
PCGF3-206ENST00000433814 WAPLQ7Z5K2 1190 aa22.99■■□□□ 1.27
PCGF3-206ENST00000433814 PRAG1Q86YV5 1406 aa22.98■■□□□ 1.27
PCGF3-206ENST00000433814 ZNF772Q68DY9 489 aaPredicted RBP22.97■■□□□ 1.27
PCGF3-206ENST00000433814 NUTM2FA1L443 756 aa22.95■■□□□ 1.26
PCGF3-206ENST00000433814 PIK3C2GO75747 1445 aa22.95■■□□□ 1.26
PCGF3-206ENST00000433814 PNPLA6Q8IY17 1366 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms