RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 MAP2K5Q13163 448 aa8.35□□□□□ -1.07
CLK1-204ENST00000432425 TMEM134Q9H6X4 195 aa8.35□□□□□ -1.07
CLK1-204ENST00000432425 MINK1Q8N4C8 1332 aaPredicted RBP8.33□□□□□ -1.08
CLK1-204ENST00000432425 ZC3H15Q8WU90 426 aaKnown RBP8.32□□□□□ -1.08
CLK1-204ENST00000432425 PLA2G2EQ9NZK7 142 aa8.32□□□□□ -1.08
CLK1-204ENST00000432425 KRI1Q8N9T8 703 aaKnown RBP8.31□□□□□ -1.08
CLK1-204ENST00000432425 IRF6O14896 467 aa8.3□□□□□ -1.08
CLK1-204ENST00000432425 CCDC102AQ96A19 550 aa8.29□□□□□ -1.08
CLK1-204ENST00000432425 ZMYND10O75800 440 aa8.28□□□□□ -1.08
CLK1-204ENST00000432425 RSPH4AQ5TD94 716 aa8.28□□□□□ -1.08
CLK1-204ENST00000432425 BARGINQ6ZT62 677 aa8.28□□□□□ -1.08
CLK1-204ENST00000432425 NLRP7Q8WX94 980 aa8.27□□□□□ -1.08
CLK1-204ENST00000432425 PRR14Q9BWN1 585 aa8.27□□□□□ -1.08
CLK1-204ENST00000432425 DAXXQ9UER7 740 aaPredicted RBP8.27□□□□□ -1.08
CLK1-204ENST00000432425 PHOX2BQ99453 314 aa8.27□□□□□ -1.09
CLK1-204ENST00000432425 APLP1P51693 650 aa8.26□□□□□ -1.09
CLK1-204ENST00000432425 KMT5BQ4FZB7 885 aa8.26□□□□□ -1.09
CLK1-204ENST00000432425 DDX11L8A8MPP1 907 aa8.24□□□□□ -1.09
CLK1-204ENST00000432425 ITGBL1O95965 494 aaPredicted RBP8.24□□□□□ -1.09
CLK1-204ENST00000432425 CFHP08603 1231 aa8.24□□□□□ -1.09
CLK1-204ENST00000432425 SULF1Q8IWU6 871 aa8.24□□□□□ -1.09
CLK1-204ENST00000432425 RDH13Q8NBN7 331 aa8.24□□□□□ -1.09
CLK1-204ENST00000432425 SLC10A3P09131 477 aa8.23□□□□□ -1.09
CLK1-204ENST00000432425 MDM2Q00987 491 aaPredicted RBP8.23□□□□□ -1.09
CLK1-204ENST00000432425 KCNC4Q03721 635 aa8.23□□□□□ -1.09
CLK1-204ENST00000432425 IFFO2Q5TF58 517 aa8.22□□□□□ -1.09
CLK1-204ENST00000432425 MTRQ99707 1265 aa8.21□□□□□ -1.09
CLK1-204ENST00000432425 IL21Q9HBE4 155 aa8.21□□□□□ -1.09
CLK1-204ENST00000432425 PCDHB3Q9Y5E6 796 aa8.21□□□□□ -1.09
CLK1-204ENST00000432425 CLCN1P35523 988 aa8.21□□□□□ -1.1
CLK1-204ENST00000432425 ACTN4O43707 911 aaKnown RBP8.2□□□□□ -1.1
CLK1-204ENST00000432425 TJAP1Q5JTD0 557 aa8.2□□□□□ -1.1
CLK1-204ENST00000432425 GPCPD1Q9NPB8 672 aa8.2□□□□□ -1.1
CLK1-204ENST00000432425 COPS2P61201 443 aa8.19□□□□□ -1.1
CLK1-204ENST00000432425 AK7Q96M32 723 aa8.18□□□□□ -1.1
CLK1-204ENST00000432425 TTLL12Q14166 644 aaPredicted RBP8.18□□□□□ -1.1
CLK1-204ENST00000432425 BLOC1S3Q6QNY0 202 aa8.17□□□□□ -1.1
CLK1-204ENST00000432425 A0A0G2JS52 829 aa8.16□□□□□ -1.1
CLK1-204ENST00000432425 GCGRP47871 477 aa8.16□□□□□ -1.1
CLK1-204ENST00000432425 AMHR2Q16671 573 aa8.16□□□□□ -1.1
CLK1-204ENST00000432425 CD46P15529 392 aa8.15□□□□□ -1.1
CLK1-204ENST00000432425 ZNF516Q92618 1163 aa8.15□□□□□ -1.1
CLK1-204ENST00000432425 SLC24A3Q9HC58 644 aa8.15□□□□□ -1.1
CLK1-204ENST00000432425 TRIM66O15016 1216 aa8.14□□□□□ -1.11
CLK1-204ENST00000432425 NR1I2O75469 434 aa8.14□□□□□ -1.11
CLK1-204ENST00000432425 FAM217BQ9NTX9 383 aaPredicted RBP8.14□□□□□ -1.11
CLK1-204ENST00000432425 ZPR1O75312 459 aa8.14□□□□□ -1.11
CLK1-204ENST00000432425 TMUB1Q9BVT8 246 aa8.14□□□□□ -1.11
CLK1-204ENST00000432425 FUT2Q10981 343 aa8.13□□□□□ -1.11
CLK1-204ENST00000432425 PUS10Q3MIT2 529 aaKnown RBP8.12□□□□□ -1.11
CLK1-204ENST00000432425 GRIPAP1Q4V328 841 aa8.12□□□□□ -1.11
CLK1-204ENST00000432425 REPIN1Q9BWE0 567 aaKnown RBP8.12□□□□□ -1.11
CLK1-204ENST00000432425 SSTR3P32745 418 aaPredicted RBP8.11□□□□□ -1.11
CLK1-204ENST00000432425 ATP6V1AP38606 617 aa8.11□□□□□ -1.11
CLK1-204ENST00000432425 GIGYF2Q6Y7W6 1299 aaKnown RBP8.11□□□□□ -1.11
CLK1-204ENST00000432425 KDM4AO75164 1064 aa8.1□□□□□ -1.11
CLK1-204ENST00000432425 PARP9Q8IXQ6 854 aa8.1□□□□□ -1.11
CLK1-204ENST00000432425 TLL1O43897 1013 aa8.09□□□□□ -1.11
CLK1-204ENST00000432425 PDE4DQ08499 809 aa8.09□□□□□ -1.11
CLK1-204ENST00000432425 MORN1Q5T089 497 aa8.09□□□□□ -1.11
CLK1-204ENST00000432425 NUTM1Q86Y26 1132 aa8.09□□□□□ -1.11
CLK1-204ENST00000432425 NKX2-3Q8TAU0 364 aa8.09□□□□□ -1.11
CLK1-204ENST00000432425 GGCXP38435 758 aa8.08□□□□□ -1.12
CLK1-204ENST00000432425 USP46P62068 366 aa8.08□□□□□ -1.12
CLK1-204ENST00000432425 SCUBE3Q8IX30 993 aa8.08□□□□□ -1.12
CLK1-204ENST00000432425 ADH1BP00325 375 aa8.07□□□□□ -1.12
CLK1-204ENST00000432425 RGS20O76081 388 aa8.06□□□□□ -1.12
CLK1-204ENST00000432425 PPP1R18Q6NYC8 613 aa8.06□□□□□ -1.12
CLK1-204ENST00000432425 SLC27A5Q9Y2P5 690 aa8.06□□□□□ -1.12
CLK1-204ENST00000432425 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.05□□□□□ -1.12
CLK1-204ENST00000432425 HOXA2O43364 376 aa8.05□□□□□ -1.12
CLK1-204ENST00000432425 FMNL1O95466 1100 aaPredicted RBP8.05□□□□□ -1.12
CLK1-204ENST00000432425 Q3C1V9 767 aa8.05□□□□□ -1.12
CLK1-204ENST00000432425 SPSB2Q99619 263 aa8.05□□□□□ -1.12
CLK1-204ENST00000432425 BEGAINQ9BUH8 593 aa8.05□□□□□ -1.12
CLK1-204ENST00000432425 MS4A1P11836 297 aa8.03□□□□□ -1.12
CLK1-204ENST00000432425 SLC6A16Q9GZN6 736 aa8.03□□□□□ -1.12
CLK1-204ENST00000432425 SALL2Q9Y467 1007 aaPredicted RBP8.02□□□□□ -1.13
CLK1-204ENST00000432425 S1PR4O95977 384 aa8.02□□□□□ -1.13
CLK1-204ENST00000432425 TPRNQ4KMQ1 711 aa8.02□□□□□ -1.13
CLK1-204ENST00000432425 SPIRE2Q8WWL2 714 aa8.02□□□□□ -1.13
CLK1-204ENST00000432425 HLA-CQ95604 372 aa8.02□□□□□ -1.13
CLK1-204ENST00000432425 DIXDC1Q155Q3 683 aa8.01□□□□□ -1.13
CLK1-204ENST00000432425 BRICD5Q6PL45 260 aa8.01□□□□□ -1.13
CLK1-204ENST00000432425 THAP11Q96EK4 314 aa8.01□□□□□ -1.13
CLK1-204ENST00000432425 GUCA2AQ02747 115 aa8□□□□□ -1.13
CLK1-204ENST00000432425 RNF19BQ6ZMZ0 732 aa8□□□□□ -1.13
CLK1-204ENST00000432425 RNF223E7ERA6 249 aa7.99□□□□□ -1.13
CLK1-204ENST00000432425 FDX1P10109 184 aa7.98□□□□□ -1.13
CLK1-204ENST00000432425 TBC1D2Q9BYX2 928 aa7.98□□□□□ -1.13
CLK1-204ENST00000432425 ANKLE1Q8NAG6 615 aa7.98□□□□□ -1.13
CLK1-204ENST00000432425 MOXD2PA6NHM9 499 aa7.97□□□□□ -1.13
CLK1-204ENST00000432425 PPEF1O14829 653 aaPredicted RBP7.97□□□□□ -1.13
CLK1-204ENST00000432425 NDUFV2P19404 249 aa7.97□□□□□ -1.13
CLK1-204ENST00000432425 MSS51Q4VC12 460 aa7.97□□□□□ -1.13
CLK1-204ENST00000432425 FAM160A2Q8N612 972 aaPredicted RBP7.97□□□□□ -1.13
CLK1-204ENST00000432425 USB1Q9BQ65 265 aaKnown RBP7.97□□□□□ -1.13
CLK1-204ENST00000432425 PRKD2Q9BZL6 878 aa7.97□□□□□ -1.13
CLK1-204ENST00000432425 KDM4CQ9H3R0 1056 aa7.96□□□□□ -1.13
CLK1-204ENST00000432425 GPBP1L1Q9HC44 474 aaPredicted RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms